RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 IGKV2D-28P01615 120 aa7.89□□□□□ -1.15
POLR1B-202ENST00000333990 POM121L12Q8N7R1 296 aa7.89□□□□□ -1.15
POLR1B-202ENST00000333990 MAST4O15021 2626 aa7.88□□□□□ -1.15
POLR1B-202ENST00000333990 TCL1BO95988 128 aa7.88□□□□□ -1.15
POLR1B-202ENST00000333990 WFDC2Q14508 124 aa7.88□□□□□ -1.15
POLR1B-202ENST00000333990 IGLV5-52A0A0A0MRZ9 124 aa7.87□□□□□ -1.15
POLR1B-202ENST00000333990 LINC00315P59091 139 aa7.87□□□□□ -1.15
POLR1B-202ENST00000333990 KRTAP1-1Q07627 177 aa7.87□□□□□ -1.15
POLR1B-202ENST00000333990 A0A1B0GX51 115 aa7.87□□□□□ -1.15
POLR1B-202ENST00000333990 Q8NAQ8 132 aa7.87□□□□□ -1.15
POLR1B-202ENST00000333990 SPATA3Q8NHX4 192 aa7.87□□□□□ -1.15
POLR1B-202ENST00000333990 NDUFC2-KCTD14E9PQ53 114 aa7.86□□□□□ -1.15
POLR1B-202ENST00000333990 TRIAP1O43715 76 aa7.86□□□□□ -1.15
POLR1B-202ENST00000333990 ZNF73O43830 326 aaPredicted RBP7.86□□□□□ -1.15
POLR1B-202ENST00000333990 A0A096LNJ9 63 aa7.86□□□□□ -1.15
POLR1B-202ENST00000333990 COX6A2Q02221 97 aa7.85□□□□□ -1.15
POLR1B-202ENST00000333990 A8MTW9 85 aa7.85□□□□□ -1.15
POLR1B-202ENST00000333990 M0QXV9 152 aa7.85□□□□□ -1.15
POLR1B-202ENST00000333990 ESRGQ1W209 222 aa7.85□□□□□ -1.15
POLR1B-202ENST00000333990 C6orf223Q8N319 242 aa7.85□□□□□ -1.15
POLR1B-202ENST00000333990 MDFIQ99750 246 aa7.85□□□□□ -1.15
POLR1B-202ENST00000333990 A0A096LNI7 61 aa7.84□□□□□ -1.15
POLR1B-202ENST00000333990 PLAC8L1A1L4L8 177 aa7.84□□□□□ -1.15
POLR1B-202ENST00000333990 FOXI1Q12951 378 aa7.84□□□□□ -1.15
POLR1B-202ENST00000333990 Q6ZQY7 126 aa7.84□□□□□ -1.15
POLR1B-202ENST00000333990 C2orf91Q6ZV80 131 aa7.84□□□□□ -1.15
POLR1B-202ENST00000333990 RPL28P46779 137 aaKnown RBP7.84□□□□□ -1.15
POLR1B-202ENST00000333990 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.82□□□□□ -1.16
POLR1B-202ENST00000333990 WWC2-AS2Q96NR7 200 aa7.82□□□□□ -1.16
POLR1B-202ENST00000333990 C14orf132Q9NPU4 83 aa7.82□□□□□ -1.16
POLR1B-202ENST00000333990 NTM-AS1Q6ZSK4 140 aa7.82□□□□□ -1.16
POLR1B-202ENST00000333990 SMIM11BQ8TCY0 68 aa7.82□□□□□ -1.16
POLR1B-202ENST00000333990 SS18L2Q9UHA2 77 aa7.82□□□□□ -1.16
POLR1B-202ENST00000333990 RPL37AP8A6NKH3 93 aa7.82□□□□□ -1.16
POLR1B-202ENST00000333990 H0Y9J4 135 aa7.81□□□□□ -1.16
POLR1B-202ENST00000333990 BPY2O14599 106 aa7.81□□□□□ -1.16
POLR1B-202ENST00000333990 NDUFC2O95298 119 aa7.81□□□□□ -1.16
POLR1B-202ENST00000333990 C9orf116Q5BN46 136 aaPredicted RBP7.81□□□□□ -1.16
POLR1B-202ENST00000333990 IGHV3OR16-9A0A0B4J2B5 98 aa7.8□□□□□ -1.16
POLR1B-202ENST00000333990 MP68P56378 58 aa7.8□□□□□ -1.16
POLR1B-202ENST00000333990 LINC01546A6NGU7 62 aa7.8□□□□□ -1.16
POLR1B-202ENST00000333990 LST1O00453 97 aa7.8□□□□□ -1.16
POLR1B-202ENST00000333990 IGKV3D-7A0A0C4DH55 119 aa7.79□□□□□ -1.16
POLR1B-202ENST00000333990 SLPIP03973 132 aa7.79□□□□□ -1.16
POLR1B-202ENST00000333990 C19orf73Q9NVV2 129 aa7.79□□□□□ -1.16
POLR1B-202ENST00000333990 MGAQ8IWI9 3026 aa7.79□□□□□ -1.16
POLR1B-202ENST00000333990 LINC00643Q86TS7 51 aa7.79□□□□□ -1.16
POLR1B-202ENST00000333990 TRBV10-3A0A0K0K1G6 114 aa7.78□□□□□ -1.16
POLR1B-202ENST00000333990 K7EIL1 84 aa7.78□□□□□ -1.16
POLR1B-202ENST00000333990 CCKP06307 115 aa7.78□□□□□ -1.16
POLR1B-202ENST00000333990 TSPEAR-AS2P59090 65 aa7.78□□□□□ -1.16
POLR1B-202ENST00000333990 Q6ZRU5 148 aa7.78□□□□□ -1.16
POLR1B-202ENST00000333990 REG3GQ6UW15 175 aa7.77□□□□□ -1.17
POLR1B-202ENST00000333990 CSNK1G2-AS1Q8NCQ2 148 aa7.77□□□□□ -1.17
POLR1B-202ENST00000333990 PPDPFQ9H3Y8 114 aa7.77□□□□□ -1.17
POLR1B-202ENST00000333990 KRTAP10-3P60369 221 aa7.77□□□□□ -1.17
POLR1B-202ENST00000333990 IGLV5-39A0A0G2JS06 123 aa7.77□□□□□ -1.17
POLR1B-202ENST00000333990 SMIM20Q8N5G0 67 aa7.77□□□□□ -1.17
POLR1B-202ENST00000333990 PRUNE2Q8WUY3 3088 aa7.76□□□□□ -1.17
POLR1B-202ENST00000333990 ATOX1O00244 68 aa7.76□□□□□ -1.17
POLR1B-202ENST00000333990 BRCA2P51587 3418 aa7.76□□□□□ -1.17
POLR1B-202ENST00000333990 MRPL55Q7Z7F7 128 aaKnown RBP7.75□□□□□ -1.17
POLR1B-202ENST00000333990 A0A0C4DFX4 3053 aa7.75□□□□□ -1.17
POLR1B-202ENST00000333990 ATP5EP2Q5VTU8 51 aa7.75□□□□□ -1.17
POLR1B-202ENST00000333990 PRYO14603 147 aa7.75□□□□□ -1.17
POLR1B-202ENST00000333990 NBDYA0A0U1RRE5 68 aa7.75□□□□□ -1.17
POLR1B-202ENST00000333990 KRTAP10-11P60412 298 aa7.74□□□□□ -1.17
POLR1B-202ENST00000333990 IGSF10Q6WRI0 2623 aa7.74□□□□□ -1.17
POLR1B-202ENST00000333990 IGLV5-45A0A087WSX0 123 aa7.73□□□□□ -1.17
POLR1B-202ENST00000333990 TEX49A0A1B0GTD5 131 aa7.73□□□□□ -1.17
POLR1B-202ENST00000333990 UPK3BQ9BT76 320 aa7.73□□□□□ -1.17
POLR1B-202ENST00000333990 TEP1Q99973 2627 aaKnown RBP7.73□□□□□ -1.17
POLR1B-202ENST00000333990 LINC00588Q9Y4M8 146 aa7.73□□□□□ -1.17
POLR1B-202ENST00000333990 ADAMTSL4-AS1Q5T5F5 129 aa7.73□□□□□ -1.17
POLR1B-202ENST00000333990 UNC79Q9P2D8 2635 aa7.72□□□□□ -1.17
POLR1B-202ENST00000333990 NDUFV3P56181 108 aaKnown RBP7.72□□□□□ -1.17
POLR1B-202ENST00000333990 DSPP15924 2871 aaKnown RBP7.71□□□□□ -1.17
POLR1B-202ENST00000333990 DNAH10OSP0CZ25 163 aa7.71□□□□□ -1.18
POLR1B-202ENST00000333990 Q9UF83 564 aa7.71□□□□□ -1.18
POLR1B-202ENST00000333990 C10orf25Q5T742 122 aa7.71□□□□□ -1.18
POLR1B-202ENST00000333990 C1orf137Q5JT78 98 aa7.7□□□□□ -1.18
POLR1B-202ENST00000333990 AKAP13Q12802 2813 aa7.7□□□□□ -1.18
POLR1B-202ENST00000333990 IGLV9-49A0A0B4J1Y8 123 aa7.7□□□□□ -1.18
POLR1B-202ENST00000333990 Q8N814 137 aa7.7□□□□□ -1.18
POLR1B-202ENST00000333990 PRR3P79522 188 aaKnown RBP7.69□□□□□ -1.18
POLR1B-202ENST00000333990 FAM236AA0A1B0GUQ0 79 aa7.69□□□□□ -1.18
POLR1B-202ENST00000333990 FAM236BA0A1B0GV22 79 aa7.69□□□□□ -1.18
POLR1B-202ENST00000333990 C3orf84H3BNL1 204 aa7.69□□□□□ -1.18
POLR1B-202ENST00000333990 TM2D3Q9BRN9 247 aa7.69□□□□□ -1.18
POLR1B-202ENST00000333990 Q6JHZ5 121 aa7.69□□□□□ -1.18
POLR1B-202ENST00000333990 BAHCC1Q9P281 2608 aa7.68□□□□□ -1.18
POLR1B-202ENST00000333990 GIG44P09565 113 aaPredicted RBP7.68□□□□□ -1.18
POLR1B-202ENST00000333990 LINC00612Q8N6U2 182 aa7.67□□□□□ -1.18
POLR1B-202ENST00000333990 C22orf24Q9Y442 160 aa7.67□□□□□ -1.18
POLR1B-202ENST00000333990 SPINK6Q6UWN8 80 aa7.67□□□□□ -1.18
POLR1B-202ENST00000333990 CR1P17927 2039 aa7.66□□□□□ -1.18
POLR1B-202ENST00000333990 ENHOQ6UWT2 76 aa7.66□□□□□ -1.18
POLR1B-202ENST00000333990 C6orf48Q9UBA6 75 aa7.66□□□□□ -1.18
POLR1B-202ENST00000333990 CHD6Q8TD26 2715 aa7.66□□□□□ -1.18
POLR1B-202ENST00000333990 SETXQ7Z333 2677 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms