RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 PRR15Q8IV56 129 aa7.63□□□□□ -1.19
SPTBN1-201ENST00000333896 COL4A4P53420 1690 aaPredicted RBP7.63□□□□□ -1.19
SPTBN1-201ENST00000333896 A0A087WVE0 104 aa7.63□□□□□ -1.19
SPTBN1-201ENST00000333896 H3BPC8 53 aa7.63□□□□□ -1.19
SPTBN1-201ENST00000333896 MAP6D1Q9H9H5 199 aa7.63□□□□□ -1.19
SPTBN1-201ENST00000333896 CR1P17927 2039 aa7.63□□□□□ -1.19
SPTBN1-201ENST00000333896 IGLV4-69A0A075B6H9 119 aa7.63□□□□□ -1.19
SPTBN1-201ENST00000333896 URB1-AS1Q96HZ7 61 aa7.62□□□□□ -1.19
SPTBN1-201ENST00000333896 DEFB131BA0A096LNP1 70 aa7.62□□□□□ -1.19
SPTBN1-201ENST00000333896 A0A1B0GU69 56 aa7.62□□□□□ -1.19
SPTBN1-201ENST00000333896 MRGPRG-AS1Q2M3A8 158 aa7.62□□□□□ -1.19
SPTBN1-201ENST00000333896 SYCNQ0VAF6 134 aa7.61□□□□□ -1.19
SPTBN1-201ENST00000333896 UNQ9165/PRO28630Q6UXU0 137 aa7.61□□□□□ -1.19
SPTBN1-201ENST00000333896 TRBV6-8A0A0A6YYG3 113 aa7.61□□□□□ -1.19
SPTBN1-201ENST00000333896 Q8IZM0 81 aa7.61□□□□□ -1.19
SPTBN1-201ENST00000333896 Q9UF83 564 aa7.61□□□□□ -1.19
SPTBN1-201ENST00000333896 HCG22E2RYF7 251 aa7.61□□□□□ -1.19
SPTBN1-201ENST00000333896 LINC00846Q9NV44 126 aa7.61□□□□□ -1.19
SPTBN1-201ENST00000333896 E7EUB6 86 aa7.6□□□□□ -1.19
SPTBN1-201ENST00000333896 TNFRSF13BO14836 293 aaPredicted RBP7.6□□□□□ -1.19
SPTBN1-201ENST00000333896 ATP11AUNQ6ZP68 121 aa7.6□□□□□ -1.19
SPTBN1-201ENST00000333896 LCA10Q71F78 164 aa7.6□□□□□ -1.19
SPTBN1-201ENST00000333896 ZNF843Q8N446 348 aa7.6□□□□□ -1.19
SPTBN1-201ENST00000333896 IGLV1-47P01700 117 aa7.59□□□□□ -1.19
SPTBN1-201ENST00000333896 DEFB113Q30KQ7 82 aa7.59□□□□□ -1.19
SPTBN1-201ENST00000333896 IGFL3Q6UXB1 125 aa7.58□□□□□ -1.2
SPTBN1-201ENST00000333896 H3BS24 57 aa7.58□□□□□ -1.2
SPTBN1-201ENST00000333896 FSTL3O95633 263 aa7.58□□□□□ -1.2
SPTBN1-201ENST00000333896 IGLV2-18A0A075B6J9 118 aa7.58□□□□□ -1.2
SPTBN1-201ENST00000333896 M0R2N4 97 aa7.58□□□□□ -1.2
SPTBN1-201ENST00000333896 C1orf137Q5JT78 98 aa7.58□□□□□ -1.2
SPTBN1-201ENST00000333896 CENPEQ02224 2701 aa7.58□□□□□ -1.2
SPTBN1-201ENST00000333896 PSMG3-AS1Q96PY0 264 aa7.57□□□□□ -1.2
SPTBN1-201ENST00000333896 COL4A6Q14031 1691 aa7.57□□□□□ -1.2
SPTBN1-201ENST00000333896 DEFB116Q30KQ4 102 aa7.57□□□□□ -1.2
SPTBN1-201ENST00000333896 TP53AIP1Q9HCN2 124 aa7.57□□□□□ -1.2
SPTBN1-201ENST00000333896 ZFP36P26651 326 aaKnown RBP7.57□□□□□ -1.2
SPTBN1-201ENST00000333896 KLKP1Q107X0 134 aa7.57□□□□□ -1.2
SPTBN1-201ENST00000333896 ATRQ13535 2644 aa7.56□□□□□ -1.2
SPTBN1-201ENST00000333896 FAM19A4Q96LR4 140 aa7.56□□□□□ -1.2
SPTBN1-201ENST00000333896 A0A087WYN8 130 aa7.56□□□□□ -1.2
SPTBN1-201ENST00000333896 SMCPP49901 116 aaPredicted RBP7.56□□□□□ -1.2
SPTBN1-201ENST00000333896 PROK1P58294 105 aa7.56□□□□□ -1.2
SPTBN1-201ENST00000333896 BRWD1-AS2P59051 145 aa7.56□□□□□ -1.2
SPTBN1-201ENST00000333896 LINC00575Q6W349 94 aa7.56□□□□□ -1.2
SPTBN1-201ENST00000333896 DMBT1Q9UGM3 2413 aaPredicted RBP7.56□□□□□ -1.2
SPTBN1-201ENST00000333896 J3QKU1 62 aa7.56□□□□□ -1.2
SPTBN1-201ENST00000333896 AMELXQ99217 191 aa7.56□□□□□ -1.2
SPTBN1-201ENST00000333896 CFAP46Q8IYW2 2715 aa7.56□□□□□ -1.2
SPTBN1-201ENST00000333896 TRAV10A0A0B4J240 114 aa7.55□□□□□ -1.2
SPTBN1-201ENST00000333896 KLLNB2CW77 178 aa7.55□□□□□ -1.2
SPTBN1-201ENST00000333896 LINC00474Q9P2X8 69 aa7.55□□□□□ -1.2
SPTBN1-201ENST00000333896 LUZP6Q538Z0 58 aa7.55□□□□□ -1.2
SPTBN1-201ENST00000333896 Q6ZPA2 131 aa7.55□□□□□ -1.2
SPTBN1-201ENST00000333896 Q8N7P7 452 aa7.55□□□□□ -1.2
SPTBN1-201ENST00000333896 IGLV8-61A0A075B6I0 122 aa7.54□□□□□ -1.2
SPTBN1-201ENST00000333896 LINC01554Q52M75 96 aa7.54□□□□□ -1.2
SPTBN1-201ENST00000333896 SSBP3-AS1Q7Z2R9 100 aa7.54□□□□□ -1.2
SPTBN1-201ENST00000333896 A0A096LNJ9 63 aa7.54□□□□□ -1.2
SPTBN1-201ENST00000333896 GRNP28799 593 aaKnown RBP7.54□□□□□ -1.2
SPTBN1-201ENST00000333896 REG3GQ6UW15 175 aa7.54□□□□□ -1.2
SPTBN1-201ENST00000333896 LOC110117498A0A087WWA1 95 aa7.53□□□□□ -1.2
SPTBN1-201ENST00000333896 CRIP3Q6Q6R5 217 aa7.53□□□□□ -1.2
SPTBN1-201ENST00000333896 LINC01561Q8N1V8 128 aa7.53□□□□□ -1.2
SPTBN1-201ENST00000333896 C1orf64Q8NEQ6 169 aa7.53□□□□□ -1.2
SPTBN1-201ENST00000333896 IGKV2D-30A0A075B6S6 120 aa7.52□□□□□ -1.2
SPTBN1-201ENST00000333896 IGKV2-30P06310 120 aa7.52□□□□□ -1.2
SPTBN1-201ENST00000333896 NHLRC4P0CG21 123 aaPredicted RBP7.52□□□□□ -1.21
SPTBN1-201ENST00000333896 LINC00336Q6ZUF6 198 aa7.52□□□□□ -1.21
SPTBN1-201ENST00000333896 MSMPQ1L6U9 139 aa7.52□□□□□ -1.21
SPTBN1-201ENST00000333896 ADAMTSL4-AS1Q5T5F5 129 aa7.51□□□□□ -1.21
SPTBN1-201ENST00000333896 TSPEAR-AS2P59090 65 aa7.51□□□□□ -1.21
SPTBN1-201ENST00000333896 FAM215AQ9Y5M1 114 aa7.51□□□□□ -1.21
SPTBN1-201ENST00000333896 PIP4P1Q86T03 277 aa7.51□□□□□ -1.21
SPTBN1-201ENST00000333896 SMIM1B2RUZ4 78 aa7.5□□□□□ -1.21
SPTBN1-201ENST00000333896 ACYP2P14621 99 aa7.5□□□□□ -1.21
SPTBN1-201ENST00000333896 FHL2Q14192 279 aa7.5□□□□□ -1.21
SPTBN1-201ENST00000333896 KMT2BQ9UMN6 2715 aaPredicted RBP7.5□□□□□ -1.21
SPTBN1-201ENST00000333896 STAB1Q9NY15 2570 aa7.5□□□□□ -1.21
SPTBN1-201ENST00000333896 BBC3Q96PG8 261 aaPredicted RBP7.5□□□□□ -1.21
SPTBN1-201ENST00000333896 CDC42SE2Q9NRR3 84 aa7.49□□□□□ -1.21
SPTBN1-201ENST00000333896 LINC00959A0A1B0GUT2 108 aa7.49□□□□□ -1.21
SPTBN1-201ENST00000333896 AVPP01185 164 aa7.49□□□□□ -1.21
SPTBN1-201ENST00000333896 Q9BRP9 147 aa7.49□□□□□ -1.21
SPTBN1-201ENST00000333896 PRR3P79522 188 aaKnown RBP7.49□□□□□ -1.21
SPTBN1-201ENST00000333896 ELOF1P60002 83 aaKnown RBP7.49□□□□□ -1.21
SPTBN1-201ENST00000333896 A0A0A0MQY5 61 aa7.48□□□□□ -1.21
SPTBN1-201ENST00000333896 KPRPQ5T749 579 aaPredicted RBP7.48□□□□□ -1.21
SPTBN1-201ENST00000333896 LINC01548A6NM66 108 aa7.48□□□□□ -1.21
SPTBN1-201ENST00000333896 K7EQG2 157 aa7.48□□□□□ -1.21
SPTBN1-201ENST00000333896 LY6G6CO95867 125 aa7.47□□□□□ -1.21
SPTBN1-201ENST00000333896 C9orf116Q5BN46 136 aaPredicted RBP7.47□□□□□ -1.21
SPTBN1-201ENST00000333896 CRIPTQ9P021 101 aa7.47□□□□□ -1.21
SPTBN1-201ENST00000333896 LINC00482Q8N8I6 264 aa7.47□□□□□ -1.21
SPTBN1-201ENST00000333896 Q6ZTC4 211 aa7.47□□□□□ -1.21
SPTBN1-201ENST00000333896 CYSRT1A8MQ03 144 aa7.46□□□□□ -1.21
SPTBN1-201ENST00000333896 DAZAP2Q15038 168 aaPredicted RBP7.46□□□□□ -1.21
SPTBN1-201ENST00000333896 LINC00242Q5T6M2 205 aa7.46□□□□□ -1.21
SPTBN1-201ENST00000333896 ODF3BA8MYP8 253 aa7.46□□□□□ -1.22
SPTBN1-201ENST00000333896 PLA2G5P39877 138 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms