RNA–Protein interactions for RNA: ENST00000333479.11

KNTC1-201, Transcript of kinetochore associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNTC1, Length 6,975 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-201ENST00000333479 HIST1H2BDP58876 126 aa2.64□□□□□ -1.99
KNTC1-201ENST00000333479 HIST1H2BCP62807 126 aa2.64□□□□□ -1.99
KNTC1-201ENST00000333479 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.64□□□□□ -1.99
KNTC1-201ENST00000333479 HIST1H2BHQ93079 126 aa2.64□□□□□ -1.99
KNTC1-201ENST00000333479 HIST1H2BNQ99877 126 aa2.64□□□□□ -1.99
KNTC1-201ENST00000333479 HIST1H2BMQ99879 126 aa2.64□□□□□ -1.99
KNTC1-201ENST00000333479 ABCA1O95477 2261 aa2.63□□□□□ -1.99
KNTC1-201ENST00000333479 ZGRF1Q86YA3 2104 aa2.63□□□□□ -1.99
KNTC1-201ENST00000333479 IGLV7-46A0A075B6I9 117 aa2.63□□□□□ -1.99
KNTC1-201ENST00000333479 WFDC13Q8IUB5 93 aa2.63□□□□□ -1.99
KNTC1-201ENST00000333479 YLPM1P49750 1951 aaKnown RBP2.63□□□□□ -1.99
KNTC1-201ENST00000333479 FAM240AA0A1B0GVK7 77 aa2.63□□□□□ -1.99
KNTC1-201ENST00000333479 Q6ZRU5 148 aa2.63□□□□□ -1.99
KNTC1-201ENST00000333479 SEC16AO15027 2179 aa2.63□□□□□ -1.99
KNTC1-201ENST00000333479 C9orf118A6NHY6 69 aa2.63□□□□□ -1.99
KNTC1-201ENST00000333479 NDUFC1O43677 76 aa2.63□□□□□ -1.99
KNTC1-201ENST00000333479 HRES1P13985 223 aa2.63□□□□□ -1.99
KNTC1-201ENST00000333479 LINC01547P58512 204 aaPredicted RBP2.63□□□□□ -1.99
KNTC1-201ENST00000333479 CXCL6P80162 114 aa2.63□□□□□ -1.99
KNTC1-201ENST00000333479 CLEC2BQ92478 149 aa2.63□□□□□ -1.99
KNTC1-201ENST00000333479 NBASA2RRP1 2371 aa2.63□□□□□ -1.99
KNTC1-201ENST00000333479 IGLV5-37A0A075B6J1 123 aa2.63□□□□□ -1.99
KNTC1-201ENST00000333479 TRBV10-3A0A0K0K1G6 114 aa2.63□□□□□ -1.99
KNTC1-201ENST00000333479 IGHV3OR16-9A0A0B4J2B5 98 aa2.63□□□□□ -1.99
KNTC1-201ENST00000333479 RNASE3P12724 160 aaKnown RBP2.62□□□□□ -1.99
KNTC1-201ENST00000333479 KRTAP10-11P60412 298 aa2.62□□□□□ -1.99
KNTC1-201ENST00000333479 SPG11Q96JI7 2443 aa2.62□□□□□ -1.99
KNTC1-201ENST00000333479 ZNF861PO60384 105 aa2.62□□□□□ -1.99
KNTC1-201ENST00000333479 FAM30AQ9NZY2 134 aa2.62□□□□□ -1.99
KNTC1-201ENST00000333479 CPAMD8Q8IZJ3 1885 aa2.62□□□□□ -1.99
KNTC1-201ENST00000333479 USF3Q68DE3 2245 aa2.62□□□□□ -1.99
KNTC1-201ENST00000333479 NAV3Q8IVL0 2385 aa2.62□□□□□ -1.99
KNTC1-201ENST00000333479 KIAA2026Q5HYC2 2103 aa2.62□□□□□ -1.99
KNTC1-201ENST00000333479 Q96NJ1 140 aa2.62□□□□□ -1.99
KNTC1-201ENST00000333479 POLR2KP53803 58 aaKnown RBP2.62□□□□□ -1.99
KNTC1-201ENST00000333479 ZNF80P51504 273 aaPredicted RBP2.61□□□□□ -1.99
KNTC1-201ENST00000333479 C7orf65Q6ZTY9 151 aa2.61□□□□□ -1.99
KNTC1-201ENST00000333479 PKDREJQ9NTG1 2253 aa2.61□□□□□ -1.99
KNTC1-201ENST00000333479 FASNP49327 2511 aaKnown RBP2.61□□□□□ -1.99
KNTC1-201ENST00000333479 EML6Q6ZMW3 1958 aa2.61□□□□□ -1.99
KNTC1-201ENST00000333479 K7EP34 96 aa2.61□□□□□ -1.99
KNTC1-201ENST00000333479 IGLV7-43P04211 117 aa2.61□□□□□ -1.99
KNTC1-201ENST00000333479 FAM229BQ4G0N7 80 aa2.61□□□□□ -1.99
KNTC1-201ENST00000333479 LINC00643Q86TS7 51 aa2.61□□□□□ -1.99
KNTC1-201ENST00000333479 SPTBN5Q9NRC6 3674 aaKnown RBP2.61□□□□□ -1.99
KNTC1-201ENST00000333479 WNK2Q9Y3S1 2297 aa2.61□□□□□ -1.99
KNTC1-201ENST00000333479 IGKV2D-30A0A075B6S6 120 aa2.61□□□□□ -1.99
KNTC1-201ENST00000333479 A0A087WSZ3 146 aa2.61□□□□□ -1.99
KNTC1-201ENST00000333479 IGKV2-30P06310 120 aa2.61□□□□□ -1.99
KNTC1-201ENST00000333479 LINC00167Q96N53 147 aa2.61□□□□□ -1.99
KNTC1-201ENST00000333479 A0A087WYN8 130 aa2.6□□□□□ -1.99
KNTC1-201ENST00000333479 LINC00526Q96FQ7 95 aa2.6□□□□□ -1.99
KNTC1-201ENST00000333479 YPEL4Q96NS1 127 aa2.6□□□□□ -1.99
KNTC1-201ENST00000333479 SMR3BP02814 79 aaPredicted RBP2.6□□□□□ -1.99
KNTC1-201ENST00000333479 PRLHP81277 87 aa2.6□□□□□ -1.99
KNTC1-201ENST00000333479 Q5VSD8 79 aa2.6□□□□□ -1.99
KNTC1-201ENST00000333479 EXPH5Q8NEV8 1989 aa2.6□□□□□ -1.99
KNTC1-201ENST00000333479 NAV2Q8IVL1 2488 aa2.6□□□□□ -1.99
KNTC1-201ENST00000333479 DNAJC13O75165 2243 aa2.6□□□□□ -1.99
KNTC1-201ENST00000333479 UQCRQO14949 82 aa2.6□□□□□ -1.99
KNTC1-201ENST00000333479 LINC00242Q5T6M2 205 aa2.6□□□□□ -1.99
KNTC1-201ENST00000333479 ARFGEF3Q5TH69 2177 aa2.6□□□□□ -1.99
KNTC1-201ENST00000333479 H3BPC8 53 aa2.6□□□□□ -1.99
KNTC1-201ENST00000333479 CADP27708 2225 aa2.59□□□□□ -1.99
KNTC1-201ENST00000333479 CNBPP62633 177 aaKnown RBP2.59□□□□□ -1.99
KNTC1-201ENST00000333479 LRRK2Q5S007 2527 aa2.59□□□□□ -1.99
KNTC1-201ENST00000333479 MPDZO75970 2070 aa2.59□□□□□ -1.99
KNTC1-201ENST00000333479 A0A1W2PPM0 123 aa2.59□□□□□ -2
KNTC1-201ENST00000333479 CD164Q04900 197 aa2.59□□□□□ -2
KNTC1-201ENST00000333479 FP248Q71RG6 208 aaPredicted RBP2.59□□□□□ -2
KNTC1-201ENST00000333479 IGF2RP11717 2491 aa2.59□□□□□ -2
KNTC1-201ENST00000333479 ABCA12Q86UK0 2595 aa2.59□□□□□ -2
KNTC1-201ENST00000333479 NCKAP5O14513 1909 aa2.59□□□□□ -2
KNTC1-201ENST00000333479 PHF5AQ7RTV0 110 aaKnown RBP2.59□□□□□ -2
KNTC1-201ENST00000333479 NTM-AS1Q6ZSK4 140 aa2.58□□□□□ -2
KNTC1-201ENST00000333479 PCSK5Q92824 1860 aa2.58□□□□□ -2
KNTC1-201ENST00000333479 LOC101927531A0A1B0GV80 90 aa2.58□□□□□ -2
KNTC1-201ENST00000333479 HCG22E2RYF7 251 aa2.58□□□□□ -2
KNTC1-201ENST00000333479 DOCK11Q5JSL3 2073 aa2.58□□□□□ -2
KNTC1-201ENST00000333479 SMIM1B2RUZ4 78 aa2.58□□□□□ -2
KNTC1-201ENST00000333479 CNFNQ9BYD5 112 aa2.58□□□□□ -2
KNTC1-201ENST00000333479 TNRC6AQ8NDV7 1962 aaKnown RBP2.58□□□□□ -2
KNTC1-201ENST00000333479 POLEQ07864 2286 aa2.58□□□□□ -2
KNTC1-201ENST00000333479 A0A096LNT2 108 aa2.58□□□□□ -2
KNTC1-201ENST00000333479 C2orf91Q6ZV80 131 aa2.58□□□□□ -2
KNTC1-201ENST00000333479 C11orf72Q8NBR9 251 aa2.58□□□□□ -2
KNTC1-201ENST00000333479 KLK9Q2XQG4 91 aa2.58□□□□□ -2
KNTC1-201ENST00000333479 TRAV22A0A0B4J277 110 aa2.57□□□□□ -2
KNTC1-201ENST00000333479 CCDC168Q8NDH2 2452 aa2.57□□□□□ -2
KNTC1-201ENST00000333479 COX8CQ7Z4L0 72 aa2.57□□□□□ -2
KNTC1-201ENST00000333479 IGKV3D-7A0A0C4DH55 119 aa2.57□□□□□ -2
KNTC1-201ENST00000333479 Q6ZRX8 168 aa2.57□□□□□ -2
KNTC1-201ENST00000333479 PTPRBP23467 1997 aa2.57□□□□□ -2
KNTC1-201ENST00000333479 DSCAMO60469 2012 aa2.57□□□□□ -2
KNTC1-201ENST00000333479 PRR9Q5T870 116 aa2.57□□□□□ -2
KNTC1-201ENST00000333479 ST20-AS1Q8NBB2 130 aa2.57□□□□□ -2
KNTC1-201ENST00000333479 RETNLBQ9BQ08 111 aa2.56□□□□□ -2
KNTC1-201ENST00000333479 CEP350Q5VT06 3117 aa2.56□□□□□ -2
KNTC1-201ENST00000333479 TLX1NBP0CAT3 122 aa2.56□□□□□ -2
KNTC1-201ENST00000333479 CSPG4Q6UVK1 2322 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms