RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 RNF151Q2KHN1 245 aa10.3□□□□□ -0.76
LRRC28-202ENST00000331450 UNQ6190/PRO20217Q6UXQ8 127 aa10.3□□□□□ -0.76
LRRC28-202ENST00000331450 IGKCP01834 107 aa10.29□□□□□ -0.76
LRRC28-202ENST00000331450 S100A2P29034 98 aa10.29□□□□□ -0.76
LRRC28-202ENST00000331450 CXCL5P42830 114 aa10.29□□□□□ -0.76
LRRC28-202ENST00000331450 KRTDAPP60985 99 aa10.29□□□□□ -0.76
LRRC28-202ENST00000331450 C6orf226Q5I0X4 101 aa10.29□□□□□ -0.76
LRRC28-202ENST00000331450 FAM30AQ9NZY2 134 aa10.29□□□□□ -0.76
LRRC28-202ENST00000331450 C6orf48Q9UBA6 75 aa10.29□□□□□ -0.76
LRRC28-202ENST00000331450 BIRC6Q9NR09 4857 aa10.28□□□□□ -0.76
LRRC28-202ENST00000331450 TRBV30A0A0K0K1B3 111 aa10.27□□□□□ -0.77
LRRC28-202ENST00000331450 CDK2AP2O75956 126 aa10.27□□□□□ -0.77
LRRC28-202ENST00000331450 CKS1BP61024 79 aa10.27□□□□□ -0.77
LRRC28-202ENST00000331450 CIRBPQ14011 172 aaKnown RBP10.27□□□□□ -0.77
LRRC28-202ENST00000331450 LRP1BQ9NZR2 4599 aa10.26□□□□□ -0.77
LRRC28-202ENST00000331450 PANO1I0J062 215 aa10.26□□□□□ -0.77
LRRC28-202ENST00000331450 PKIGQ9Y2B9 76 aa10.26□□□□□ -0.77
LRRC28-202ENST00000331450 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.26□□□□□ -0.77
LRRC28-202ENST00000331450 A0A096LNI7 61 aa10.25□□□□□ -0.77
LRRC28-202ENST00000331450 XGP55808 180 aa10.25□□□□□ -0.77
LRRC28-202ENST00000331450 LOC107984640A0A0U1RRK4 108 aa10.24□□□□□ -0.77
LRRC28-202ENST00000331450 TLX1NBP0CAT3 122 aa10.24□□□□□ -0.77
LRRC28-202ENST00000331450 CHTF8P0CG12 524 aa10.23□□□□□ -0.77
LRRC28-202ENST00000331450 C9orf116Q5BN46 136 aaPredicted RBP10.23□□□□□ -0.77
LRRC28-202ENST00000331450 SPACA4Q8TDM5 124 aa10.23□□□□□ -0.77
LRRC28-202ENST00000331450 C20orf202A1L168 122 aa10.22□□□□□ -0.77
LRRC28-202ENST00000331450 ZNF625Q96I27 306 aaPredicted RBP10.22□□□□□ -0.77
LRRC28-202ENST00000331450 LEPROTO15243 131 aa10.21□□□□□ -0.77
LRRC28-202ENST00000331450 PTTG1IPP53801 180 aa10.21□□□□□ -0.77
LRRC28-202ENST00000331450 TSPEAR-AS2P59090 65 aa10.21□□□□□ -0.77
LRRC28-202ENST00000331450 HERVK_113P61574 105 aa10.21□□□□□ -0.77
LRRC28-202ENST00000331450 SFTA2Q6UW10 78 aa10.21□□□□□ -0.77
LRRC28-202ENST00000331450 TMA7Q9Y2S6 64 aaKnown RBP10.21□□□□□ -0.77
LRRC28-202ENST00000331450 IGKV2-24A0A0C4DH68 120 aa10.2□□□□□ -0.78
LRRC28-202ENST00000331450 NDUFC2-KCTD14E9PQ53 114 aa10.2□□□□□ -0.78
LRRC28-202ENST00000331450 HAMPP81172 84 aa10.2□□□□□ -0.78
LRRC28-202ENST00000331450 Q6ZRP5 223 aa10.2□□□□□ -0.78
LRRC28-202ENST00000331450 SCXQ7RTU7 201 aa10.2□□□□□ -0.78
LRRC28-202ENST00000331450 APOBP04114 4563 aaKnown RBP10.19□□□□□ -0.78
LRRC28-202ENST00000331450 E9PLD3 99 aa10.19□□□□□ -0.78
LRRC28-202ENST00000331450 RPL18AQ02543 176 aaKnown RBP10.19□□□□□ -0.78
LRRC28-202ENST00000331450 CIRBP-AS1Q8TBR5 109 aa10.19□□□□□ -0.78
LRRC28-202ENST00000331450 PLEKHB2Q96CS7 222 aa10.19□□□□□ -0.78
LRRC28-202ENST00000331450 AKR1D1P51857 326 aa10.18□□□□□ -0.78
LRRC28-202ENST00000331450 GAGE2BQ13066 116 aa10.18□□□□□ -0.78
LRRC28-202ENST00000331450 LINC00474Q9P2X8 69 aa10.18□□□□□ -0.78
LRRC28-202ENST00000331450 KIAA1109Q2LD37 5005 aa10.17□□□□□ -0.78
LRRC28-202ENST00000331450 DNAH8Q96JB1 4490 aa10.17□□□□□ -0.78
LRRC28-202ENST00000331450 J3QQQ9 107 aa10.17□□□□□ -0.78
LRRC28-202ENST00000331450 STPG4Q8N801 248 aa10.17□□□□□ -0.78
LRRC28-202ENST00000331450 A0A087WYN8 130 aa10.16□□□□□ -0.78
LRRC28-202ENST00000331450 MAJINQ3KP22 176 aa10.16□□□□□ -0.78
LRRC28-202ENST00000331450 ATOH7Q8N100 152 aa10.16□□□□□ -0.78
LRRC28-202ENST00000331450 PLAC8Q9NZF1 115 aa10.16□□□□□ -0.78
LRRC28-202ENST00000331450 NDUFA12Q9UI09 145 aa10.16□□□□□ -0.78
LRRC28-202ENST00000331450 EPM2AB3EWF7 344 aa10.15□□□□□ -0.78
LRRC28-202ENST00000331450 ERG28Q9UKR5 140 aa10.15□□□□□ -0.78
LRRC28-202ENST00000331450 IGKV2D-26A0A0A0MRZ7 120 aa10.14□□□□□ -0.79
LRRC28-202ENST00000331450 NMUP48645 174 aa10.14□□□□□ -0.79
LRRC28-202ENST00000331450 HERV-K104P63124 156 aa10.14□□□□□ -0.79
LRRC28-202ENST00000331450 GAGE2EQ4V326 116 aa10.14□□□□□ -0.79
LRRC28-202ENST00000331450 GAGE2DQ9UEU5 116 aa10.14□□□□□ -0.79
LRRC28-202ENST00000331450 MYMXA0A1B0GTQ4 84 aa10.13□□□□□ -0.79
LRRC28-202ENST00000331450 LGALS3P17931 250 aaKnown RBP10.13□□□□□ -0.79
LRRC28-202ENST00000331450 COX17Q14061 63 aa10.13□□□□□ -0.79
LRRC28-202ENST00000331450 ANKRD39Q53RE8 183 aa10.13□□□□□ -0.79
LRRC28-202ENST00000331450 C9orf129Q5T035 196 aaKnown RBP10.13□□□□□ -0.79
LRRC28-202ENST00000331450 KRTAP17-1Q9BYP8 105 aa10.13□□□□□ -0.79
LRRC28-202ENST00000331450 RYR1P21817 5038 aa10.13□□□□□ -0.79
LRRC28-202ENST00000331450 A0A1W2PNN7 141 aa10.11□□□□□ -0.79
LRRC28-202ENST00000331450 PFN2P35080 140 aa10.11□□□□□ -0.79
LRRC28-202ENST00000331450 KRTAP7-1Q8IUC3 87 aa10.1□□□□□ -0.79
LRRC28-202ENST00000331450 DPH3Q96FX2 82 aa10.1□□□□□ -0.79
LRRC28-202ENST00000331450 XAGE1AQ9HD64 81 aa10.1□□□□□ -0.79
LRRC28-202ENST00000331450 FAM168BA1KXE4 195 aa10.09□□□□□ -0.79
LRRC28-202ENST00000331450 SCGB1D1O95968 90 aa10.09□□□□□ -0.79
LRRC28-202ENST00000331450 HSPG2P98160 4391 aa10.09□□□□□ -0.79
LRRC28-202ENST00000331450 SMR3BP02814 79 aaPredicted RBP10.08□□□□□ -0.8
LRRC28-202ENST00000331450 SMIM13P0DJ93 91 aa10.08□□□□□ -0.8
LRRC28-202ENST00000331450 JOSD1Q15040 202 aaPredicted RBP10.08□□□□□ -0.8
LRRC28-202ENST00000331450 TTTY13Q9BZ97 58 aa10.08□□□□□ -0.8
LRRC28-202ENST00000331450 SND1-IT1Q9HBX3 110 aa10.08□□□□□ -0.8
LRRC28-202ENST00000331450 LINC00587B1AMM8 73 aa10.07□□□□□ -0.8
LRRC28-202ENST00000331450 MEIG1Q5JSS6 88 aa10.07□□□□□ -0.8
LRRC28-202ENST00000331450 Q8N1X5 172 aa10.07□□□□□ -0.8
LRRC28-202ENST00000331450 A0A0J9YXY3 114 aa10.06□□□□□ -0.8
LRRC28-202ENST00000331450 LINC00158P58513 81 aa10.06□□□□□ -0.8
LRRC28-202ENST00000331450 PLA2G2DQ9UNK4 145 aa10.06□□□□□ -0.8
LRRC28-202ENST00000331450 A0A0U1RRA0 63 aa10.05□□□□□ -0.8
LRRC28-202ENST00000331450 ZNF815PA8K554 130 aa10.05□□□□□ -0.8
LRRC28-202ENST00000331450 SERTAD4-AS1Q5TG53 156 aa10.05□□□□□ -0.8
LRRC28-202ENST00000331450 FAM19A5Q7Z5A7 132 aaPredicted RBP10.05□□□□□ -0.8
LRRC28-202ENST00000331450 LINC00528Q8N1L1 170 aa10.05□□□□□ -0.8
LRRC28-202ENST00000331450 HERC2O95714 4834 aa10.05□□□□□ -0.8
LRRC28-202ENST00000331450 HSBP1L1C9JCN9 74 aa10.04□□□□□ -0.8
LRRC28-202ENST00000331450 MIR7-3HGQ8N6C7 128 aa10.04□□□□□ -0.8
LRRC28-202ENST00000331450 PYY3Q5JQD4 70 aa10.03□□□□□ -0.8
LRRC28-202ENST00000331450 PCP2Q8IVA1 136 aa10.03□□□□□ -0.8
LRRC28-202ENST00000331450 LITAFQ99732 161 aa10.03□□□□□ -0.8
LRRC28-202ENST00000331450 IGLV5-37A0A075B6J1 123 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms