RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 CCL18P55774 89 aa10.03□□□□□ -0.8
TPM3-206ENST00000330188 ATP5G1P05496 136 aa10.03□□□□□ -0.8
TPM3-206ENST00000330188 PFN2P35080 140 aa10.03□□□□□ -0.8
TPM3-206ENST00000330188 C6orf226Q5I0X4 101 aa10.03□□□□□ -0.8
TPM3-206ENST00000330188 Q8IZM0 81 aa10.03□□□□□ -0.8
TPM3-206ENST00000330188 LINC01561Q8N1V8 128 aa10.03□□□□□ -0.8
TPM3-206ENST00000330188 C11orf68Q9H3H3 251 aaKnown RBP10.03□□□□□ -0.8
TPM3-206ENST00000330188 TRAV26-1A0A087WT03 109 aa10.02□□□□□ -0.81
TPM3-206ENST00000330188 WIPF1O43516 503 aa10.02□□□□□ -0.81
TPM3-206ENST00000330188 IGHV4-30-4P0DP06 118 aa10.01□□□□□ -0.81
TPM3-206ENST00000330188 RPL28P46779 137 aaKnown RBP10.01□□□□□ -0.81
TPM3-206ENST00000330188 LINC00269Q8N2A0 174 aa10.01□□□□□ -0.81
TPM3-206ENST00000330188 Q8N3U1 123 aa10.01□□□□□ -0.81
TPM3-206ENST00000330188 HIVEP1P15822 2718 aa10.01□□□□□ -0.81
TPM3-206ENST00000330188 TRACP01848 142 aa10□□□□□ -0.81
TPM3-206ENST00000330188 FAM218AQ96MZ4 157 aa10□□□□□ -0.81
TPM3-206ENST00000330188 TRAV8-4A0A0B4J246 113 aa10□□□□□ -0.81
TPM3-206ENST00000330188 DEFB121Q5J5C9 76 aa10□□□□□ -0.81
TPM3-206ENST00000330188 SPART-AS1P0CW21 52 aa9.99□□□□□ -0.81
TPM3-206ENST00000330188 CD164L2Q6UWJ8 174 aa9.99□□□□□ -0.81
TPM3-206ENST00000330188 ANGP03950 147 aaKnown RBP9.98□□□□□ -0.81
TPM3-206ENST00000330188 CHCHD10Q8WYQ3 142 aaPredicted RBP9.98□□□□□ -0.81
TPM3-206ENST00000330188 TRRAPQ9Y4A5 3859 aa9.98□□□□□ -0.81
TPM3-206ENST00000330188 REG3AQ06141 175 aa9.98□□□□□ -0.81
TPM3-206ENST00000330188 HTN3P15516 51 aa9.97□□□□□ -0.81
TPM3-206ENST00000330188 KIAA0087Q14695 138 aa9.97□□□□□ -0.81
TPM3-206ENST00000330188 MRPL23Q16540 153 aaKnown RBP9.97□□□□□ -0.81
TPM3-206ENST00000330188 SMIM11BQ8TCY0 68 aa9.97□□□□□ -0.81
TPM3-206ENST00000330188 IGLV10-54A0A075B6I4 117 aa9.97□□□□□ -0.81
TPM3-206ENST00000330188 TEP1Q99973 2627 aaKnown RBP9.96□□□□□ -0.81
TPM3-206ENST00000330188 CKS1BP61024 79 aa9.95□□□□□ -0.82
TPM3-206ENST00000330188 LELP1Q5T871 98 aa9.95□□□□□ -0.82
TPM3-206ENST00000330188 ATRQ13535 2644 aa9.95□□□□□ -0.82
TPM3-206ENST00000330188 C22orf24Q9Y442 160 aa9.94□□□□□ -0.82
TPM3-206ENST00000330188 BAALC-AS2P0C853 105 aa9.94□□□□□ -0.82
TPM3-206ENST00000330188 FAM240AA0A1B0GVK7 77 aa9.93□□□□□ -0.82
TPM3-206ENST00000330188 CXCL5P42830 114 aa9.93□□□□□ -0.82
TPM3-206ENST00000330188 CFAP161Q6P656 301 aa9.93□□□□□ -0.82
TPM3-206ENST00000330188 MALP21145 153 aa9.92□□□□□ -0.82
TPM3-206ENST00000330188 Q9HAA7 133 aa9.92□□□□□ -0.82
TPM3-206ENST00000330188 A0A087WYN8 130 aa9.91□□□□□ -0.82
TPM3-206ENST00000330188 OXLD1Q5BKU9 147 aa9.91□□□□□ -0.82
TPM3-206ENST00000330188 OR13C6PQ8NH95 151 aa9.91□□□□□ -0.82
TPM3-206ENST00000330188 H0YGX0 51 aa9.91□□□□□ -0.82
TPM3-206ENST00000330188 SNCGO76070 127 aa9.91□□□□□ -0.82
TPM3-206ENST00000330188 COX17Q14061 63 aa9.91□□□□□ -0.82
TPM3-206ENST00000330188 KRTAP10-11P60412 298 aa9.9□□□□□ -0.82
TPM3-206ENST00000330188 A0A1B0GV72 72 aa9.89□□□□□ -0.83
TPM3-206ENST00000330188 C15orf53Q8NAA6 179 aa9.89□□□□□ -0.83
TPM3-206ENST00000330188 PRR34Q9NV39 138 aa9.89□□□□□ -0.83
TPM3-206ENST00000330188 C9orf116Q5BN46 136 aaPredicted RBP9.89□□□□□ -0.83
TPM3-206ENST00000330188 RETNQ9HD89 108 aa9.88□□□□□ -0.83
TPM3-206ENST00000330188 KLK12Q9UKR0 248 aa9.88□□□□□ -0.83
TPM3-206ENST00000330188 KLK5Q9Y337 293 aaPredicted RBP9.88□□□□□ -0.83
TPM3-206ENST00000330188 LYPD5Q6UWN5 251 aa9.88□□□□□ -0.83
TPM3-206ENST00000330188 NDUFC2O95298 119 aa9.87□□□□□ -0.83
TPM3-206ENST00000330188 DNAL4O96015 105 aa9.87□□□□□ -0.83
TPM3-206ENST00000330188 PRR3P79522 188 aaKnown RBP9.86□□□□□ -0.83
TPM3-206ENST00000330188 ENHOQ6UWT2 76 aa9.86□□□□□ -0.83
TPM3-206ENST00000330188 NANOS2P60321 138 aaKnown RBP9.86□□□□□ -0.83
TPM3-206ENST00000330188 SPAG11BQ08648 103 aa9.86□□□□□ -0.83
TPM3-206ENST00000330188 TTC32Q5I0X7 151 aa9.86□□□□□ -0.83
TPM3-206ENST00000330188 C6orf223Q8N319 242 aa9.86□□□□□ -0.83
TPM3-206ENST00000330188 LECT2O14960 151 aa9.85□□□□□ -0.83
TPM3-206ENST00000330188 GAGE2BQ13066 116 aa9.85□□□□□ -0.83
TPM3-206ENST00000330188 GAGE2EQ4V326 116 aa9.85□□□□□ -0.83
TPM3-206ENST00000330188 C10orf25Q5T742 122 aa9.85□□□□□ -0.83
TPM3-206ENST00000330188 GAGE2DQ9UEU5 116 aa9.85□□□□□ -0.83
TPM3-206ENST00000330188 ACYP1P07311 99 aa9.85□□□□□ -0.83
TPM3-206ENST00000330188 KRTAP24-1Q3LI83 254 aa9.85□□□□□ -0.83
TPM3-206ENST00000330188 Q6Q795 121 aa9.84□□□□□ -0.83
TPM3-206ENST00000330188 UNQ6190/PRO20217Q6UXQ8 127 aa9.84□□□□□ -0.83
TPM3-206ENST00000330188 FLNBO75369 2602 aaKnown RBP9.84□□□□□ -0.83
TPM3-206ENST00000330188 EGFEM1PQ0D2K5 195 aa9.83□□□□□ -0.84
TPM3-206ENST00000330188 Q8NDZ9 215 aa9.83□□□□□ -0.84
TPM3-206ENST00000330188 LINC00526Q96FQ7 95 aa9.83□□□□□ -0.84
TPM3-206ENST00000330188 H3BNG1 76 aa9.83□□□□□ -0.84
TPM3-206ENST00000330188 CYSRT1A8MQ03 144 aa9.82□□□□□ -0.84
TPM3-206ENST00000330188 INAFM2P0DMQ5 153 aa9.82□□□□□ -0.84
TPM3-206ENST00000330188 KPRPQ5T749 579 aaPredicted RBP9.82□□□□□ -0.84
TPM3-206ENST00000330188 A0A0J9YWU9 116 aa9.82□□□□□ -0.84
TPM3-206ENST00000330188 Q6ZTC4 211 aa9.82□□□□□ -0.84
TPM3-206ENST00000330188 TMEM126AQ9H061 195 aa9.82□□□□□ -0.84
TPM3-206ENST00000330188 C9orf129Q5T035 196 aaKnown RBP9.81□□□□□ -0.84
TPM3-206ENST00000330188 WFDC10BQ8IUB3 73 aa9.8□□□□□ -0.84
TPM3-206ENST00000330188 MUC7Q8TAX7 377 aa9.8□□□□□ -0.84
TPM3-206ENST00000330188 CMYA5Q8N3K9 4069 aa9.8□□□□□ -0.84
TPM3-206ENST00000330188 F8P00451 2351 aa9.8□□□□□ -0.84
TPM3-206ENST00000330188 NCR3O14931 201 aa9.8□□□□□ -0.84
TPM3-206ENST00000330188 SLPIP03973 132 aa9.8□□□□□ -0.84
TPM3-206ENST00000330188 BAHCC1Q9P281 2608 aa9.8□□□□□ -0.84
TPM3-206ENST00000330188 SMCR5Q8TEV8 140 aa9.79□□□□□ -0.84
TPM3-206ENST00000330188 OBSCN-AS1Q96MR7 158 aa9.79□□□□□ -0.84
TPM3-206ENST00000330188 LINC00167Q96N53 147 aa9.79□□□□□ -0.84
TPM3-206ENST00000330188 GVQW2A0A096LPI5 108 aaPredicted RBP9.78□□□□□ -0.84
TPM3-206ENST00000330188 A0A1B0GX51 115 aa9.78□□□□□ -0.84
TPM3-206ENST00000330188 SDIM1Q6ZPB5 146 aa9.78□□□□□ -0.84
TPM3-206ENST00000330188 ANAPC13Q9BS18 74 aa9.78□□□□□ -0.84
TPM3-206ENST00000330188 TRBV7-7A0A0K0K1E9 115 aa9.77□□□□□ -0.84
TPM3-206ENST00000330188 C3orf56Q8N813 242 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms