RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 Q6ZRP5 223 aa18.23■□□□□ 0.51
SYNGR1-202ENST00000318801 GAGE2EQ4V326 116 aa18.22■□□□□ 0.51
SYNGR1-202ENST00000318801 GAGE2DQ9UEU5 116 aa18.22■□□□□ 0.51
SYNGR1-202ENST00000318801 NDUFC2-KCTD14E9PQ53 114 aa18.2■□□□□ 0.5
SYNGR1-202ENST00000318801 HBDP02042 147 aa18.2■□□□□ 0.5
SYNGR1-202ENST00000318801 NDUFA6P56556 154 aa18.19■□□□□ 0.5
SYNGR1-202ENST00000318801 HERC1Q15751 4861 aa18.18■□□□□ 0.5
SYNGR1-202ENST00000318801 H3BRM9 83 aa18.17■□□□□ 0.5
SYNGR1-202ENST00000318801 CXCL5P42830 114 aa18.17■□□□□ 0.5
SYNGR1-202ENST00000318801 PDZD11Q5EBL8 140 aa18.17■□□□□ 0.5
SYNGR1-202ENST00000318801 F8VRH5 84 aa18.16■□□□□ 0.5
SYNGR1-202ENST00000318801 ATP5LO75964 103 aa18.16■□□□□ 0.5
SYNGR1-202ENST00000318801 IGLV5-45A0A087WSX0 123 aa18.15■□□□□ 0.5
SYNGR1-202ENST00000318801 URB1-AS1Q96HZ7 61 aa18.14■□□□□ 0.49
SYNGR1-202ENST00000318801 YPEL4Q96NS1 127 aa18.14■□□□□ 0.49
SYNGR1-202ENST00000318801 SMIM1B2RUZ4 78 aa18.13■□□□□ 0.49
SYNGR1-202ENST00000318801 COX7B2Q8TF08 81 aa18.12■□□□□ 0.49
SYNGR1-202ENST00000318801 A0A096LNJ9 63 aa18.11■□□□□ 0.49
SYNGR1-202ENST00000318801 PMCHL1Q16048 86 aa18.11■□□□□ 0.49
SYNGR1-202ENST00000318801 SPINK6Q6UWN8 80 aa18.11■□□□□ 0.49
SYNGR1-202ENST00000318801 PHF5AQ7RTV0 110 aaKnown RBP18.11■□□□□ 0.49
SYNGR1-202ENST00000318801 FAM19A5Q7Z5A7 132 aaPredicted RBP18.1■□□□□ 0.49
SYNGR1-202ENST00000318801 CBLN2Q8IUK8 224 aa18.1■□□□□ 0.49
SYNGR1-202ENST00000318801 CHCHD1Q96BP2 118 aaKnown RBP18.1■□□□□ 0.49
SYNGR1-202ENST00000318801 SLC7A5P1Q8MH63 180 aa18.09■□□□□ 0.49
SYNGR1-202ENST00000318801 FAM168BA1KXE4 195 aa18.08■□□□□ 0.49
SYNGR1-202ENST00000318801 SPINK8P0C7L1 97 aa18.08■□□□□ 0.49
SYNGR1-202ENST00000318801 IGLC3P0DOY3 106 aa18.07■□□□□ 0.48
SYNGR1-202ENST00000318801 PKHD1L1Q86WI1 4243 aa18.07■□□□□ 0.48
SYNGR1-202ENST00000318801 PSORS1C2Q9UIG4 136 aa18.06■□□□□ 0.48
SYNGR1-202ENST00000318801 LRP1Q07954 4544 aaKnown RBP18.06■□□□□ 0.48
SYNGR1-202ENST00000318801 REG3GQ6UW15 175 aa18.05■□□□□ 0.48
SYNGR1-202ENST00000318801 BAGE3Q86Y29 109 aa18.05■□□□□ 0.48
SYNGR1-202ENST00000318801 M0QXV9 152 aa18.03■□□□□ 0.48
SYNGR1-202ENST00000318801 C1orf137Q5JT78 98 aa18.03■□□□□ 0.48
SYNGR1-202ENST00000318801 C9orf129Q5T035 196 aaKnown RBP18.03■□□□□ 0.48
SYNGR1-202ENST00000318801 SERTAD4-AS1Q5TG53 156 aa18.03■□□□□ 0.48
SYNGR1-202ENST00000318801 UBE2BP63146 152 aa18.02■□□□□ 0.47
SYNGR1-202ENST00000318801 HSBP1O75506 76 aa18■□□□□ 0.47
SYNGR1-202ENST00000318801 SRSF9Q13242 221 aaKnown RBP eCLIP18■□□□□ 0.47
SYNGR1-202ENST00000318801 XAGE1AQ9HD64 81 aa17.99■□□□□ 0.47
SYNGR1-202ENST00000318801 TRGC2P03986 189 aa17.98■□□□□ 0.47
SYNGR1-202ENST00000318801 ZNF22P17026 224 aaPredicted RBP17.97■□□□□ 0.47
SYNGR1-202ENST00000318801 TMEM170BQ5T4T1 132 aa17.97■□□□□ 0.47
SYNGR1-202ENST00000318801 IFI27L1Q96BM0 104 aa17.97■□□□□ 0.47
SYNGR1-202ENST00000318801 CHTOPQ9Y3Y2 248 aaKnown RBP17.97■□□□□ 0.47
SYNGR1-202ENST00000318801 LBHQ53QV2 105 aaPredicted RBP17.96■□□□□ 0.47
SYNGR1-202ENST00000318801 FAT3Q8TDW7 4589 aa17.96■□□□□ 0.47
SYNGR1-202ENST00000318801 IGLV5-39A0A0G2JS06 123 aa17.95■□□□□ 0.46
SYNGR1-202ENST00000318801 LINC01600Q96MT4 127 aa17.94■□□□□ 0.46
SYNGR1-202ENST00000318801 SFTA2Q6UW10 78 aa17.93■□□□□ 0.46
SYNGR1-202ENST00000318801 TRAV12-1A0A0B4J245 112 aa17.92■□□□□ 0.46
SYNGR1-202ENST00000318801 C11orf86A6NJI1 115 aa17.92■□□□□ 0.46
SYNGR1-202ENST00000318801 KRTAP7-1Q8IUC3 87 aa17.92■□□□□ 0.46
SYNGR1-202ENST00000318801 IGLV7-43P04211 117 aa17.91■□□□□ 0.46
SYNGR1-202ENST00000318801 ODF1Q14990 250 aa17.91■□□□□ 0.46
SYNGR1-202ENST00000318801 C22orf24Q9Y442 160 aa17.91■□□□□ 0.46
SYNGR1-202ENST00000318801 MT1HL1P0DM35 61 aa17.9■□□□□ 0.46
SYNGR1-202ENST00000318801 DIRC1Q969H9 104 aa17.9■□□□□ 0.46
SYNGR1-202ENST00000318801 FAM19A2Q8N3H0 131 aa17.89■□□□□ 0.45
SYNGR1-202ENST00000318801 TP73-AS1Q9UF72 201 aa17.88■□□□□ 0.45
SYNGR1-202ENST00000318801 PFN2P35080 140 aa17.86■□□□□ 0.45
SYNGR1-202ENST00000318801 COX17Q14061 63 aa17.86■□□□□ 0.45
SYNGR1-202ENST00000318801 COLCA2A8K830 154 aa17.85■□□□□ 0.45
SYNGR1-202ENST00000318801 MRPL55Q7Z7F7 128 aaKnown RBP17.85■□□□□ 0.45
SYNGR1-202ENST00000318801 LEPROTL1O95214 131 aa17.84■□□□□ 0.45
SYNGR1-202ENST00000318801 KRTAP11-1Q8IUC1 163 aa17.84■□□□□ 0.45
SYNGR1-202ENST00000318801 PLA2G2DQ9UNK4 145 aa17.84■□□□□ 0.45
SYNGR1-202ENST00000318801 SERF1AO75920 110 aa17.83■□□□□ 0.45
SYNGR1-202ENST00000318801 ERG28Q9UKR5 140 aa17.82■□□□□ 0.44
SYNGR1-202ENST00000318801 NUPR1O60356 82 aa17.81■□□□□ 0.44
SYNGR1-202ENST00000318801 NKAPP1Q8N9T2 125 aa17.81■□□□□ 0.44
SYNGR1-202ENST00000318801 HSPB8Q9UJY1 196 aa17.81■□□□□ 0.44
SYNGR1-202ENST00000318801 TMEM223A0PJW6 202 aa17.79■□□□□ 0.44
SYNGR1-202ENST00000318801 H0Y8G0 127 aa17.79■□□□□ 0.44
SYNGR1-202ENST00000318801 ZNF625Q96I27 306 aaPredicted RBP17.79■□□□□ 0.44
SYNGR1-202ENST00000318801 H0Y9J4 135 aa17.77■□□□□ 0.43
SYNGR1-202ENST00000318801 IGLV5-37A0A075B6J1 123 aa17.74■□□□□ 0.43
SYNGR1-202ENST00000318801 RPL24P83731 157 aaKnown RBP17.74■□□□□ 0.43
SYNGR1-202ENST00000318801 LINC00167Q96N53 147 aa17.74■□□□□ 0.43
SYNGR1-202ENST00000318801 SND1-IT1Q9HBX3 110 aa17.74■□□□□ 0.43
SYNGR1-202ENST00000318801 FABP4P15090 132 aa17.73■□□□□ 0.43
SYNGR1-202ENST00000318801 KRTAP10-8P60410 259 aa17.73■□□□□ 0.43
SYNGR1-202ENST00000318801 ATP6V1G1O75348 118 aa17.72■□□□□ 0.43
SYNGR1-202ENST00000318801 PLNP26678 52 aa17.72■□□□□ 0.43
SYNGR1-202ENST00000318801 LINC00158P58513 81 aa17.72■□□□□ 0.43
SYNGR1-202ENST00000318801 RPL37AP8A6NKH3 93 aa17.71■□□□□ 0.43
SYNGR1-202ENST00000318801 LINC00310P59036 64 aa17.71■□□□□ 0.43
SYNGR1-202ENST00000318801 GAGE10A6NGK3 116 aa17.7■□□□□ 0.42
SYNGR1-202ENST00000318801 ZNF861PO60384 105 aa17.7■□□□□ 0.42
SYNGR1-202ENST00000318801 LINC00587B1AMM8 73 aa17.69■□□□□ 0.42
SYNGR1-202ENST00000318801 RPL28P46779 137 aaKnown RBP17.68■□□□□ 0.42
SYNGR1-202ENST00000318801 HERV-K104P63124 156 aa17.68■□□□□ 0.42
SYNGR1-202ENST00000318801 BCE1O60756 84 aa17.67■□□□□ 0.42
SYNGR1-202ENST00000318801 MAP1LC3CQ9BXW4 147 aa17.67■□□□□ 0.42
SYNGR1-202ENST00000318801 SCO1O75880 301 aa17.65■□□□□ 0.42
SYNGR1-202ENST00000318801 DPM2O94777 84 aa17.65■□□□□ 0.42
SYNGR1-202ENST00000318801 MEIG1Q5JSS6 88 aa17.65■□□□□ 0.42
SYNGR1-202ENST00000318801 MYMXA0A1B0GTQ4 84 aa17.64■□□□□ 0.41
SYNGR1-202ENST00000318801 HERVK_113P61574 105 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms