RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 PSCAO43653 123 aa9.31□□□□□ -0.92
MSRA-201ENST00000317173 HNRNPA3P51991 378 aaKnown RBP9.31□□□□□ -0.92
MSRA-201ENST00000317173 SCGB1D4Q6XE38 83 aa9.31□□□□□ -0.92
MSRA-201ENST00000317173 C15orf56Q8N910 161 aa9.31□□□□□ -0.92
MSRA-201ENST00000317173 FRAS1Q86XX4 4008 aa9.31□□□□□ -0.92
MSRA-201ENST00000317173 ZNF561-AS1K7EIQ3 104 aa9.31□□□□□ -0.92
MSRA-201ENST00000317173 DDTP30046 118 aa9.31□□□□□ -0.92
MSRA-201ENST00000317173 CKS1BP61024 79 aa9.31□□□□□ -0.92
MSRA-201ENST00000317173 LINC00587B1AMM8 73 aa9.3□□□□□ -0.92
MSRA-201ENST00000317173 C2orf91Q6ZV80 131 aa9.3□□□□□ -0.92
MSRA-201ENST00000317173 C6orf223Q8N319 242 aa9.3□□□□□ -0.92
MSRA-201ENST00000317173 C2orf48Q96LS8 159 aa9.3□□□□□ -0.92
MSRA-201ENST00000317173 A0A0J9YXY3 114 aa9.29□□□□□ -0.92
MSRA-201ENST00000317173 USP17L23D6RBM5 183 aa9.29□□□□□ -0.92
MSRA-201ENST00000317173 TIMM17BO60830 172 aa9.29□□□□□ -0.92
MSRA-201ENST00000317173 Q6ZRN7 208 aaPredicted RBP9.29□□□□□ -0.92
MSRA-201ENST00000317173 NTN5Q8WTR8 489 aaPredicted RBP9.29□□□□□ -0.92
MSRA-201ENST00000317173 TP73-AS1Q9UF72 201 aa9.29□□□□□ -0.92
MSRA-201ENST00000317173 C1orf134Q5TEV5 83 aa9.28□□□□□ -0.92
MSRA-201ENST00000317173 RTL8CO15255 209 aa9.27□□□□□ -0.93
MSRA-201ENST00000317173 CIRBPQ14011 172 aaKnown RBP9.27□□□□□ -0.93
MSRA-201ENST00000317173 C14orf177Q52M58 125 aa9.27□□□□□ -0.93
MSRA-201ENST00000317173 TMEM238C9JI98 176 aa9.26□□□□□ -0.93
MSRA-201ENST00000317173 CTAG1AP78358 180 aa9.26□□□□□ -0.93
MSRA-201ENST00000317173 HIGD2BQ4VC39 106 aa9.26□□□□□ -0.93
MSRA-201ENST00000317173 SPANXB1Q9NS25 103 aaPredicted RBP9.26□□□□□ -0.93
MSRA-201ENST00000317173 DNAH2Q9P225 4427 aa9.26□□□□□ -0.93
MSRA-201ENST00000317173 PCP4L1A6NKN8 68 aa9.26□□□□□ -0.93
MSRA-201ENST00000317173 TAL2Q16559 108 aa9.26□□□□□ -0.93
MSRA-201ENST00000317173 CAMK2N2Q96S95 79 aa9.26□□□□□ -0.93
MSRA-201ENST00000317173 MEIG1Q5JSS6 88 aa9.25□□□□□ -0.93
MSRA-201ENST00000317173 C2orf82Q6UX34 121 aa9.25□□□□□ -0.93
MSRA-201ENST00000317173 Q6ZVH6 145 aa9.25□□□□□ -0.93
MSRA-201ENST00000317173 HECTD4Q9Y4D8 3996 aa9.24□□□□□ -0.93
MSRA-201ENST00000317173 TRBV30A0A0K0K1B3 111 aa9.24□□□□□ -0.93
MSRA-201ENST00000317173 HSD52Q0P140 79 aa9.24□□□□□ -0.93
MSRA-201ENST00000317173 COX17Q14061 63 aa9.24□□□□□ -0.93
MSRA-201ENST00000317173 DNAH17Q9UFH2 4485 aa9.23□□□□□ -0.93
MSRA-201ENST00000317173 LINC00526Q96FQ7 95 aa9.23□□□□□ -0.93
MSRA-201ENST00000317173 LITAFQ99732 161 aa9.23□□□□□ -0.93
MSRA-201ENST00000317173 SPANXDQ9BXN6 97 aa9.23□□□□□ -0.93
MSRA-201ENST00000317173 SPANXCQ9NY87 97 aa9.23□□□□□ -0.93
MSRA-201ENST00000317173 ERG28Q9UKR5 140 aa9.23□□□□□ -0.93
MSRA-201ENST00000317173 FAT2Q9NYQ8 4349 aa9.23□□□□□ -0.93
MSRA-201ENST00000317173 A0A1B0GVY2 172 aa9.22□□□□□ -0.93
MSRA-201ENST00000317173 LRCOL1A6NCL2 159 aa9.22□□□□□ -0.93
MSRA-201ENST00000317173 GCSHP23434 173 aa9.22□□□□□ -0.93
MSRA-201ENST00000317173 SYCNQ0VAF6 134 aa9.22□□□□□ -0.93
MSRA-201ENST00000317173 UNQ6190/PRO20217Q6UXQ8 127 aa9.22□□□□□ -0.93
MSRA-201ENST00000317173 SRSF9Q13242 221 aaKnown RBP eCLIP9.21□□□□□ -0.93
MSRA-201ENST00000317173 RNF151Q2KHN1 245 aa9.21□□□□□ -0.93
MSRA-201ENST00000317173 HIST1H4GQ99525 98 aa9.21□□□□□ -0.93
MSRA-201ENST00000317173 LECT2O14960 151 aa9.21□□□□□ -0.94
MSRA-201ENST00000317173 SMIM13P0DJ93 91 aa9.21□□□□□ -0.94
MSRA-201ENST00000317173 WFDC2Q14508 124 aa9.21□□□□□ -0.94
MSRA-201ENST00000317173 C10orf25Q5T742 122 aa9.21□□□□□ -0.94
MSRA-201ENST00000317173 Q6ZRU5 148 aa9.21□□□□□ -0.94
MSRA-201ENST00000317173 COPS9Q8WXC6 57 aa9.21□□□□□ -0.94
MSRA-201ENST00000317173 PPDPFQ9H3Y8 114 aa9.21□□□□□ -0.94
MSRA-201ENST00000317173 C6orf48Q9UBA6 75 aa9.21□□□□□ -0.94
MSRA-201ENST00000317173 M0R143 59 aa9.2□□□□□ -0.94
MSRA-201ENST00000317173 IFITM1P13164 125 aa9.2□□□□□ -0.94
MSRA-201ENST00000317173 PTTG1IPP53801 180 aa9.2□□□□□ -0.94
MSRA-201ENST00000317173 LINC00158P58513 81 aa9.2□□□□□ -0.94
MSRA-201ENST00000317173 CARD19Q96LW7 228 aa9.2□□□□□ -0.94
MSRA-201ENST00000317173 CNBPP62633 177 aaKnown RBP9.19□□□□□ -0.94
MSRA-201ENST00000317173 ADAMTSL4-AS1Q5T5F5 129 aa9.19□□□□□ -0.94
MSRA-201ENST00000317173 A0A087WTM6 91 aa9.18□□□□□ -0.94
MSRA-201ENST00000317173 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.18□□□□□ -0.94
MSRA-201ENST00000317173 PFN2P35080 140 aa9.18□□□□□ -0.94
MSRA-201ENST00000317173 CEND1Q8N111 149 aa9.18□□□□□ -0.94
MSRA-201ENST00000317173 MIR7-3HGQ8N6C7 128 aa9.17□□□□□ -0.94
MSRA-201ENST00000317173 A0A0U1RRA0 63 aa9.16□□□□□ -0.94
MSRA-201ENST00000317173 SLPIP03973 132 aa9.16□□□□□ -0.94
MSRA-201ENST00000317173 TLX1NBP0CAT3 122 aa9.16□□□□□ -0.94
MSRA-201ENST00000317173 Q8N814 137 aa9.16□□□□□ -0.94
MSRA-201ENST00000317173 TMEM238LA0A1B0GVL6 79 aa9.15□□□□□ -0.94
MSRA-201ENST00000317173 A6NJY4 79 aa9.15□□□□□ -0.94
MSRA-201ENST00000317173 NDUFC2-KCTD14E9PQ53 114 aa9.15□□□□□ -0.94
MSRA-201ENST00000317173 RPL24P83731 157 aaKnown RBP9.15□□□□□ -0.94
MSRA-201ENST00000317173 TNP2Q05952 138 aa9.15□□□□□ -0.94
MSRA-201ENST00000317173 C9orf116Q5BN46 136 aaPredicted RBP9.15□□□□□ -0.94
MSRA-201ENST00000317173 BVES-AS1Q5T3Y7 98 aa9.15□□□□□ -0.94
MSRA-201ENST00000317173 PKIGQ9Y2B9 76 aa9.15□□□□□ -0.94
MSRA-201ENST00000317173 EREGO14944 169 aa9.15□□□□□ -0.95
MSRA-201ENST00000317173 MUSTN1Q8IVN3 82 aa9.15□□□□□ -0.95
MSRA-201ENST00000317173 DAND5Q8N907 189 aa9.15□□□□□ -0.95
MSRA-201ENST00000317173 LINC00308Q8TCZ7 52 aa9.15□□□□□ -0.95
MSRA-201ENST00000317173 LOC107984156A0A0G2JMH3 177 aa9.14□□□□□ -0.95
MSRA-201ENST00000317173 HINT1P49773 126 aaPredicted RBP9.14□□□□□ -0.95
MSRA-201ENST00000317173 ARL17AQ8IVW1 177 aa9.14□□□□□ -0.95
MSRA-201ENST00000317173 PKHD1P08F94 4074 aa9.14□□□□□ -0.95
MSRA-201ENST00000317173 PKD1P98161 4303 aa9.13□□□□□ -0.95
MSRA-201ENST00000317173 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.12□□□□□ -0.95
MSRA-201ENST00000317173 DNAH11Q96DT5 4516 aa9.12□□□□□ -0.95
MSRA-201ENST00000317173 LOC107984640A0A0U1RRK4 108 aa9.11□□□□□ -0.95
MSRA-201ENST00000317173 FXYD2P54710 66 aa9.11□□□□□ -0.95
MSRA-201ENST00000317173 SOSTDC1Q6X4U4 206 aa9.11□□□□□ -0.95
MSRA-201ENST00000317173 C9orf163Q8N9P6 203 aa9.11□□□□□ -0.95
MSRA-201ENST00000317173 SND1-IT1Q9HBX3 110 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms