RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 LINC01561Q8N1V8 128 aa5.82□□□□□ -1.48
PDE4D-201ENST00000309641 C2orf48Q96LS8 159 aa5.82□□□□□ -1.48
PDE4D-201ENST00000309641 PACRGQ96M98 296 aaPredicted RBP5.82□□□□□ -1.48
PDE4D-201ENST00000309641 HSPB8Q9UJY1 196 aa5.82□□□□□ -1.48
PDE4D-201ENST00000309641 F8VRH5 84 aa5.81□□□□□ -1.48
PDE4D-201ENST00000309641 TMEM170BQ5T4T1 132 aa5.81□□□□□ -1.48
PDE4D-201ENST00000309641 C6orf48Q9UBA6 75 aa5.81□□□□□ -1.48
PDE4D-201ENST00000309641 HERC2O95714 4834 aa5.81□□□□□ -1.48
PDE4D-201ENST00000309641 C9orf116Q5BN46 136 aaPredicted RBP5.81□□□□□ -1.48
PDE4D-201ENST00000309641 FAT1Q14517 4588 aa5.8□□□□□ -1.48
PDE4D-201ENST00000309641 A0A096LNI7 61 aa5.8□□□□□ -1.48
PDE4D-201ENST00000309641 IGKV2-24A0A0C4DH68 120 aa5.8□□□□□ -1.48
PDE4D-201ENST00000309641 C6orf226Q5I0X4 101 aa5.8□□□□□ -1.48
PDE4D-201ENST00000309641 SCXQ7RTU7 201 aa5.8□□□□□ -1.48
PDE4D-201ENST00000309641 Q8IZM0 81 aa5.8□□□□□ -1.48
PDE4D-201ENST00000309641 IGLV5-39A0A0G2JS06 123 aa5.79□□□□□ -1.48
PDE4D-201ENST00000309641 NDUFA1O15239 70 aa5.79□□□□□ -1.48
PDE4D-201ENST00000309641 SMR3BP02814 79 aaPredicted RBP5.79□□□□□ -1.48
PDE4D-201ENST00000309641 PRSS2P07478 247 aa5.79□□□□□ -1.48
PDE4D-201ENST00000309641 CIRBP-AS1Q8TBR5 109 aa5.79□□□□□ -1.48
PDE4D-201ENST00000309641 MAP1LC3CQ9BXW4 147 aa5.79□□□□□ -1.48
PDE4D-201ENST00000309641 H3BRM9 83 aa5.79□□□□□ -1.48
PDE4D-201ENST00000309641 SYS1-DBNDD2H3BUS1 97 aa5.79□□□□□ -1.48
PDE4D-201ENST00000309641 COX7B2Q8TF08 81 aa5.79□□□□□ -1.48
PDE4D-201ENST00000309641 TMEM223A0PJW6 202 aa5.78□□□□□ -1.48
PDE4D-201ENST00000309641 C3orf79P0CE67 100 aa5.78□□□□□ -1.48
PDE4D-201ENST00000309641 CTAG1AP78358 180 aa5.78□□□□□ -1.48
PDE4D-201ENST00000309641 HIST3H2BBQ8N257 126 aa5.78□□□□□ -1.48
PDE4D-201ENST00000309641 KRTAP4-5Q9BYR2 181 aa5.78□□□□□ -1.48
PDE4D-201ENST00000309641 LOC100996750A0A140TA64 210 aa5.77□□□□□ -1.49
PDE4D-201ENST00000309641 CKS1BP61024 79 aa5.77□□□□□ -1.49
PDE4D-201ENST00000309641 CIRBPQ14011 172 aaKnown RBP5.77□□□□□ -1.49
PDE4D-201ENST00000309641 Q6ZRP5 223 aa5.77□□□□□ -1.49
PDE4D-201ENST00000309641 SPACA4Q8TDM5 124 aa5.77□□□□□ -1.49
PDE4D-201ENST00000309641 KRTAP4-6Q9BYQ5 205 aa5.77□□□□□ -1.49
PDE4D-201ENST00000309641 SRRM2Q9UQ35 2752 aaKnown RBP5.77□□□□□ -1.49
PDE4D-201ENST00000309641 A0A087WYN8 130 aa5.77□□□□□ -1.49
PDE4D-201ENST00000309641 KRTDAPP60985 99 aa5.77□□□□□ -1.49
PDE4D-201ENST00000309641 RPL18AQ02543 176 aaKnown RBP5.77□□□□□ -1.49
PDE4D-201ENST00000309641 GAGE2BQ13066 116 aa5.77□□□□□ -1.49
PDE4D-201ENST00000309641 LOC107984640A0A0U1RRK4 108 aa5.76□□□□□ -1.49
PDE4D-201ENST00000309641 F8WDY8 70 aa5.76□□□□□ -1.49
PDE4D-201ENST00000309641 DPM2O94777 84 aa5.76□□□□□ -1.49
PDE4D-201ENST00000309641 PTTG1IPP53801 180 aa5.76□□□□□ -1.49
PDE4D-201ENST00000309641 SNRPEP62304 92 aaKnown RBP5.76□□□□□ -1.49
PDE4D-201ENST00000309641 MAJINQ3KP22 176 aa5.76□□□□□ -1.49
PDE4D-201ENST00000309641 DPH3Q96FX2 82 aa5.76□□□□□ -1.49
PDE4D-201ENST00000309641 HIST1H2BLQ99880 126 aa5.76□□□□□ -1.49
PDE4D-201ENST00000309641 TRBV30A0A0K0K1B3 111 aa5.75□□□□□ -1.49
PDE4D-201ENST00000309641 IGKCP01834 107 aa5.75□□□□□ -1.49
PDE4D-201ENST00000309641 RNF151Q2KHN1 245 aa5.75□□□□□ -1.49
PDE4D-201ENST00000309641 LINC01545Q5VT33 79 aa5.75□□□□□ -1.49
PDE4D-201ENST00000309641 ZNF625Q96I27 306 aaPredicted RBP5.75□□□□□ -1.49
PDE4D-201ENST00000309641 S100A6P06703 90 aa5.75□□□□□ -1.49
PDE4D-201ENST00000309641 PLNP26678 52 aa5.75□□□□□ -1.49
PDE4D-201ENST00000309641 TSPEAR-AS2P59090 65 aa5.75□□□□□ -1.49
PDE4D-201ENST00000309641 GAGE2EQ4V326 116 aa5.75□□□□□ -1.49
PDE4D-201ENST00000309641 GAGE2DQ9UEU5 116 aa5.75□□□□□ -1.49
PDE4D-201ENST00000309641 A0A1W2PNN7 141 aa5.74□□□□□ -1.49
PDE4D-201ENST00000309641 C5orf52A6NGY3 159 aa5.74□□□□□ -1.49
PDE4D-201ENST00000309641 PET117Q6UWS5 81 aa5.74□□□□□ -1.49
PDE4D-201ENST00000309641 STPG4Q8N801 248 aa5.74□□□□□ -1.49
PDE4D-201ENST00000309641 FAM168BA1KXE4 195 aa5.74□□□□□ -1.49
PDE4D-201ENST00000309641 NDUFC2-KCTD14E9PQ53 114 aa5.74□□□□□ -1.49
PDE4D-201ENST00000309641 TLX1NBP0CAT3 122 aa5.74□□□□□ -1.49
PDE4D-201ENST00000309641 CXCL5P42830 114 aa5.74□□□□□ -1.49
PDE4D-201ENST00000309641 S100A2P29034 98 aa5.73□□□□□ -1.49
PDE4D-201ENST00000309641 KRTAP7-1Q8IUC3 87 aa5.73□□□□□ -1.49
PDE4D-201ENST00000309641 Q8N1X5 172 aa5.73□□□□□ -1.49
PDE4D-201ENST00000309641 XAGE1AQ9HD64 81 aa5.73□□□□□ -1.49
PDE4D-201ENST00000309641 PLAC8Q9NZF1 115 aa5.73□□□□□ -1.49
PDE4D-201ENST00000309641 VPS13BQ7Z7G8 4022 aa5.72□□□□□ -1.49
PDE4D-201ENST00000309641 C9orf129Q5T035 196 aaKnown RBP5.72□□□□□ -1.49
PDE4D-201ENST00000309641 ATOH7Q8N100 152 aa5.72□□□□□ -1.49
PDE4D-201ENST00000309641 PFN2P35080 140 aa5.72□□□□□ -1.49
PDE4D-201ENST00000309641 Q5VSD8 79 aa5.71□□□□□ -1.5
PDE4D-201ENST00000309641 LINC00528Q8N1L1 170 aa5.71□□□□□ -1.5
PDE4D-201ENST00000309641 LINC00474Q9P2X8 69 aa5.71□□□□□ -1.5
PDE4D-201ENST00000309641 A0A0U1RRA0 63 aa5.7□□□□□ -1.5
PDE4D-201ENST00000309641 LEPROTO15243 131 aa5.7□□□□□ -1.5
PDE4D-201ENST00000309641 NDUFA12Q9UI09 145 aa5.7□□□□□ -1.5
PDE4D-201ENST00000309641 IGKV2D-26A0A0A0MRZ7 120 aa5.7□□□□□ -1.5
PDE4D-201ENST00000309641 EPM2AB3EWF7 344 aa5.7□□□□□ -1.5
PDE4D-201ENST00000309641 J3QQQ9 107 aa5.7□□□□□ -1.5
PDE4D-201ENST00000309641 ERG28Q9UKR5 140 aa5.7□□□□□ -1.5
PDE4D-201ENST00000309641 PKIGQ9Y2B9 76 aa5.7□□□□□ -1.5
PDE4D-201ENST00000309641 ABCA13Q86UQ4 5058 aa5.7□□□□□ -1.5
PDE4D-201ENST00000309641 E9PLD3 99 aa5.69□□□□□ -1.5
PDE4D-201ENST00000309641 HERVK_113P61574 105 aa5.69□□□□□ -1.5
PDE4D-201ENST00000309641 SERTAD4-AS1Q5TG53 156 aa5.69□□□□□ -1.5
PDE4D-201ENST00000309641 FAM19A5Q7Z5A7 132 aaPredicted RBP5.69□□□□□ -1.5
PDE4D-201ENST00000309641 TTTY13Q9BZ97 58 aa5.69□□□□□ -1.5
PDE4D-201ENST00000309641 KRTAP10-4P60372 401 aaPredicted RBP5.69□□□□□ -1.5
PDE4D-201ENST00000309641 PHF5AQ7RTV0 110 aaKnown RBP5.69□□□□□ -1.5
PDE4D-201ENST00000309641 SMIM13P0DJ93 91 aa5.68□□□□□ -1.5
PDE4D-201ENST00000309641 KRTAP11-1Q8IUC1 163 aa5.68□□□□□ -1.5
PDE4D-201ENST00000309641 PLEKHB2Q96CS7 222 aa5.68□□□□□ -1.5
PDE4D-201ENST00000309641 C20orf202A1L168 122 aa5.67□□□□□ -1.5
PDE4D-201ENST00000309641 FAM229AH3BQW9 127 aa5.67□□□□□ -1.5
PDE4D-201ENST00000309641 Q8NDZ9 215 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms