RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 SETD2Q9BYW2 2564 aaPredicted RBP2.9□□□□□ -1.94
USH2A-201ENST00000307340 DEFB131BA0A096LNP1 70 aa2.9□□□□□ -1.94
USH2A-201ENST00000307340 LINC01556Q5JQF7 62 aa2.9□□□□□ -1.94
USH2A-201ENST00000307340 PLA2G2EQ9NZK7 142 aa2.9□□□□□ -1.94
USH2A-201ENST00000307340 A8MTW9 85 aa2.9□□□□□ -1.95
USH2A-201ENST00000307340 ACYP2P14621 99 aa2.9□□□□□ -1.95
USH2A-201ENST00000307340 LINC00242Q5T6M2 205 aa2.9□□□□□ -1.95
USH2A-201ENST00000307340 ENHOQ6UWT2 76 aa2.89□□□□□ -1.95
USH2A-201ENST00000307340 Q6ZPA2 131 aa2.89□□□□□ -1.95
USH2A-201ENST00000307340 ESRGQ1W209 222 aa2.89□□□□□ -1.95
USH2A-201ENST00000307340 CFAP54Q96N23 3096 aa2.89□□□□□ -1.95
USH2A-201ENST00000307340 LYPD5Q6UWN5 251 aa2.89□□□□□ -1.95
USH2A-201ENST00000307340 IGF2RP11717 2491 aa2.89□□□□□ -1.95
USH2A-201ENST00000307340 LINC00337Q8N6G1 96 aa2.89□□□□□ -1.95
USH2A-201ENST00000307340 C8orf87E5RJ46 101 aa2.89□□□□□ -1.95
USH2A-201ENST00000307340 C11orf72Q8NBR9 251 aa2.89□□□□□ -1.95
USH2A-201ENST00000307340 SNURFQ9Y675 71 aa2.89□□□□□ -1.95
USH2A-201ENST00000307340 IGHV3OR16-9A0A0B4J2B5 98 aa2.89□□□□□ -1.95
USH2A-201ENST00000307340 PLA2G2DQ9UNK4 145 aa2.89□□□□□ -1.95
USH2A-201ENST00000307340 KPRPQ5T749 579 aaPredicted RBP2.89□□□□□ -1.95
USH2A-201ENST00000307340 CAMK2N1Q7Z7J9 78 aa2.89□□□□□ -1.95
USH2A-201ENST00000307340 A8MZ25 164 aa2.89□□□□□ -1.95
USH2A-201ENST00000307340 PLAC8L1A1L4L8 177 aa2.88□□□□□ -1.95
USH2A-201ENST00000307340 ZNF702PQ9H963 129 aa2.88□□□□□ -1.95
USH2A-201ENST00000307340 MTORP42345 2549 aa2.88□□□□□ -1.95
USH2A-201ENST00000307340 Q8N3U1 123 aa2.88□□□□□ -1.95
USH2A-201ENST00000307340 F8W735 103 aaPredicted RBP2.88□□□□□ -1.95
USH2A-201ENST00000307340 C1orf137Q5JT78 98 aa2.88□□□□□ -1.95
USH2A-201ENST00000307340 SPINK2P20155 84 aa2.88□□□□□ -1.95
USH2A-201ENST00000307340 TRIOO75962 3097 aa2.88□□□□□ -1.95
USH2A-201ENST00000307340 NANOS2P60321 138 aaKnown RBP2.88□□□□□ -1.95
USH2A-201ENST00000307340 RETNLBQ9BQ08 111 aa2.88□□□□□ -1.95
USH2A-201ENST00000307340 GDF5OSQ5U4N7 250 aa2.88□□□□□ -1.95
USH2A-201ENST00000307340 CYSRT1A8MQ03 144 aa2.88□□□□□ -1.95
USH2A-201ENST00000307340 A8MUN3 132 aa2.88□□□□□ -1.95
USH2A-201ENST00000307340 PRM2P04554 102 aa2.88□□□□□ -1.95
USH2A-201ENST00000307340 Q6ZTI0 123 aa2.88□□□□□ -1.95
USH2A-201ENST00000307340 LOC101927531A0A1B0GV80 90 aa2.87□□□□□ -1.95
USH2A-201ENST00000307340 LINC01547P58512 204 aaPredicted RBP2.87□□□□□ -1.95
USH2A-201ENST00000307340 DEFB135Q30KP9 77 aa2.87□□□□□ -1.95
USH2A-201ENST00000307340 Q6ZQY7 126 aa2.87□□□□□ -1.95
USH2A-201ENST00000307340 LINC01006Q8NI28 216 aa2.87□□□□□ -1.95
USH2A-201ENST00000307340 LAMA1P25391 3075 aa2.87□□□□□ -1.95
USH2A-201ENST00000307340 IGLV4-60A0A075B6I1 120 aa2.86□□□□□ -1.95
USH2A-201ENST00000307340 ZNF292O60281 2723 aa2.86□□□□□ -1.95
USH2A-201ENST00000307340 MT-ATP8P03928 68 aa2.86□□□□□ -1.95
USH2A-201ENST00000307340 EDN2P20800 178 aa2.86□□□□□ -1.95
USH2A-201ENST00000307340 XGP55808 180 aa2.86□□□□□ -1.95
USH2A-201ENST00000307340 ASB16-AS1Q495Z4 193 aa2.86□□□□□ -1.95
USH2A-201ENST00000307340 SPAG11AQ6PDA7 123 aa2.86□□□□□ -1.95
USH2A-201ENST00000307340 WFDC10AQ9H1F0 79 aa2.86□□□□□ -1.95
USH2A-201ENST00000307340 TRAV22A0A0B4J277 110 aa2.86□□□□□ -1.95
USH2A-201ENST00000307340 IGFL4Q6B9Z1 124 aa2.86□□□□□ -1.95
USH2A-201ENST00000307340 Q6ZRP5 223 aa2.86□□□□□ -1.95
USH2A-201ENST00000307340 Q6ZRX8 168 aa2.86□□□□□ -1.95
USH2A-201ENST00000307340 LINC00208Q96KT6 92 aa2.86□□□□□ -1.95
USH2A-201ENST00000307340 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.86□□□□□ -1.95
USH2A-201ENST00000307340 KIF25-AS1Q9Y6Z4 181 aa2.86□□□□□ -1.95
USH2A-201ENST00000307340 C16orf90A8MZG2 172 aa2.85□□□□□ -1.95
USH2A-201ENST00000307340 PRAC2D3DTV9 90 aa2.85□□□□□ -1.95
USH2A-201ENST00000307340 TLX1NBP0CAT3 122 aa2.85□□□□□ -1.95
USH2A-201ENST00000307340 LINC00336Q6ZUF6 198 aa2.85□□□□□ -1.95
USH2A-201ENST00000307340 IGLV6-57P01721 117 aa2.85□□□□□ -1.95
USH2A-201ENST00000307340 DNAH10OSP0CZ25 163 aa2.85□□□□□ -1.95
USH2A-201ENST00000307340 TFF1P04155 84 aa2.85□□□□□ -1.95
USH2A-201ENST00000307340 FRYLO94915 3013 aa2.85□□□□□ -1.95
USH2A-201ENST00000307340 FAM229AH3BQW9 127 aa2.85□□□□□ -1.95
USH2A-201ENST00000307340 HTTP42858 3142 aa2.85□□□□□ -1.95
USH2A-201ENST00000307340 IGKV3D-7A0A0C4DH55 119 aa2.85□□□□□ -1.95
USH2A-201ENST00000307340 FHL2Q14192 279 aa2.85□□□□□ -1.95
USH2A-201ENST00000307340 DEFB105AQ8NG35 78 aa2.85□□□□□ -1.95
USH2A-201ENST00000307340 MPLKIPQ8TAP9 179 aa2.85□□□□□ -1.95
USH2A-201ENST00000307340 FAM19A5Q7Z5A7 132 aaPredicted RBP2.84□□□□□ -1.95
USH2A-201ENST00000307340 NCR3O14931 201 aa2.84□□□□□ -1.95
USH2A-201ENST00000307340 C1orf158Q8N1D5 194 aa2.84□□□□□ -1.95
USH2A-201ENST00000307340 ZNF843Q8N446 348 aa2.84□□□□□ -1.95
USH2A-201ENST00000307340 TNP2Q05952 138 aa2.84□□□□□ -1.95
USH2A-201ENST00000307340 Q6ZQT7 251 aa2.84□□□□□ -1.95
USH2A-201ENST00000307340 CENPEQ02224 2701 aa2.84□□□□□ -1.96
USH2A-201ENST00000307340 WIPF1O43516 503 aa2.84□□□□□ -1.96
USH2A-201ENST00000307340 AVPP01185 164 aa2.84□□□□□ -1.96
USH2A-201ENST00000307340 MSMPQ1L6U9 139 aa2.84□□□□□ -1.96
USH2A-201ENST00000307340 ADAMTSL4-AS1Q5T5F5 129 aa2.83□□□□□ -1.96
USH2A-201ENST00000307340 CHD9Q3L8U1 2897 aa2.83□□□□□ -1.96
USH2A-201ENST00000307340 LINC00310P59036 64 aa2.83□□□□□ -1.96
USH2A-201ENST00000307340 Q6ZTC4 211 aa2.83□□□□□ -1.96
USH2A-201ENST00000307340 Q8NBF4 154 aa2.83□□□□□ -1.96
USH2A-201ENST00000307340 MAP1AP78559 2803 aaPredicted RBP2.83□□□□□ -1.96
USH2A-201ENST00000307340 A0A1W2PNU3 283 aaPredicted RBP2.83□□□□□ -1.96
USH2A-201ENST00000307340 RNASE13Q5GAN3 156 aaKnown RBP2.83□□□□□ -1.96
USH2A-201ENST00000307340 DEFB136Q30KP8 78 aa2.83□□□□□ -1.96
USH2A-201ENST00000307340 A8MWP4 228 aa2.83□□□□□ -1.96
USH2A-201ENST00000307340 C6orf223Q8N319 242 aa2.83□□□□□ -1.96
USH2A-201ENST00000307340 FRYQ5TBA9 3013 aa2.83□□□□□ -1.96
USH2A-201ENST00000307340 Q6ZQT0 140 aa2.83□□□□□ -1.96
USH2A-201ENST00000307340 Q9HAA7 133 aa2.83□□□□□ -1.96
USH2A-201ENST00000307340 PRR34Q9NV39 138 aa2.83□□□□□ -1.96
USH2A-201ENST00000307340 MAPKAPK5-AS1Q8N8E1 139 aa2.82□□□□□ -1.96
USH2A-201ENST00000307340 H3BS24 57 aa2.82□□□□□ -1.96
USH2A-201ENST00000307340 Q6ZVQ6 151 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms