RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 Q8N3U1 123 aa3.71□□□□□ -1.82
USP8-201ENST00000307179 WFDC9Q8NEX5 89 aa3.71□□□□□ -1.82
USP8-201ENST00000307179 COX7BP24311 80 aa3.71□□□□□ -1.82
USP8-201ENST00000307179 HAMPP81172 84 aa3.71□□□□□ -1.82
USP8-201ENST00000307179 C6orf99Q4VX62 202 aa3.71□□□□□ -1.82
USP8-201ENST00000307179 RMI2Q96E14 147 aa3.71□□□□□ -1.82
USP8-201ENST00000307179 CSMD2Q7Z408 3487 aa3.71□□□□□ -1.82
USP8-201ENST00000307179 IGLV4-60A0A075B6I1 120 aa3.71□□□□□ -1.82
USP8-201ENST00000307179 A0A0U1RQV1 116 aa3.71□□□□□ -1.82
USP8-201ENST00000307179 PRR15Q8IV56 129 aa3.71□□□□□ -1.82
USP8-201ENST00000307179 LINC00612Q8N6U2 182 aa3.71□□□□□ -1.82
USP8-201ENST00000307179 PCNX1Q96RV3 2341 aa3.71□□□□□ -1.82
USP8-201ENST00000307179 BPY2O14599 106 aa3.7□□□□□ -1.82
USP8-201ENST00000307179 FUSP35637 526 aaKnown RBP eCLIP3.7□□□□□ -1.82
USP8-201ENST00000307179 OTOGLQ3ZCN5 2332 aa3.7□□□□□ -1.82
USP8-201ENST00000307179 TPRP12270 2363 aaKnown RBP3.7□□□□□ -1.82
USP8-201ENST00000307179 TRAV10A0A0B4J240 114 aa3.7□□□□□ -1.82
USP8-201ENST00000307179 DIRC1Q969H9 104 aa3.7□□□□□ -1.82
USP8-201ENST00000307179 NOP10Q9NPE3 64 aaKnown RBP3.7□□□□□ -1.82
USP8-201ENST00000307179 PTPRZ1P23471 2315 aaPredicted RBP3.7□□□□□ -1.82
USP8-201ENST00000307179 KIAA0087Q14695 138 aa3.7□□□□□ -1.82
USP8-201ENST00000307179 A0A0J9YWU9 116 aa3.69□□□□□ -1.82
USP8-201ENST00000307179 IGHV4-30-4P0DP06 118 aa3.69□□□□□ -1.82
USP8-201ENST00000307179 RPL35AP18077 110 aaKnown RBP3.69□□□□□ -1.82
USP8-201ENST00000307179 C10orf99Q6UWK7 81 aa3.69□□□□□ -1.82
USP8-201ENST00000307179 LCE6AA0A183 80 aa3.69□□□□□ -1.82
USP8-201ENST00000307179 SPATA3Q8NHX4 192 aa3.69□□□□□ -1.82
USP8-201ENST00000307179 SNURFQ9Y675 71 aa3.69□□□□□ -1.82
USP8-201ENST00000307179 Q1T7F1 81 aa3.68□□□□□ -1.82
USP8-201ENST00000307179 BRK1Q8WUW1 75 aa3.68□□□□□ -1.82
USP8-201ENST00000307179 OCR1Q9BZK8 76 aa3.68□□□□□ -1.82
USP8-201ENST00000307179 GNLYP22749 145 aa3.68□□□□□ -1.82
USP8-201ENST00000307179 ELOF1P60002 83 aaKnown RBP3.68□□□□□ -1.82
USP8-201ENST00000307179 SEC61GP60059 68 aa3.68□□□□□ -1.82
USP8-201ENST00000307179 CELA1Q9UNI1 258 aa3.68□□□□□ -1.82
USP8-201ENST00000307179 PRM2P04554 102 aa3.68□□□□□ -1.82
USP8-201ENST00000307179 TM2D3Q9BRN9 247 aa3.68□□□□□ -1.82
USP8-201ENST00000307179 CACNA1HO95180 2353 aa3.67□□□□□ -1.82
USP8-201ENST00000307179 AVPP01185 164 aa3.67□□□□□ -1.82
USP8-201ENST00000307179 LRBAP50851 2863 aa3.67□□□□□ -1.82
USP8-201ENST00000307179 IGKV3OR2-268A0A0C4DH90 116 aa3.67□□□□□ -1.82
USP8-201ENST00000307179 LYRM9A8MSI8 78 aa3.67□□□□□ -1.82
USP8-201ENST00000307179 Q6ZQY7 126 aa3.67□□□□□ -1.82
USP8-201ENST00000307179 Q6ZRU5 148 aa3.67□□□□□ -1.82
USP8-201ENST00000307179 ZNF843Q8N446 348 aa3.67□□□□□ -1.82
USP8-201ENST00000307179 KMT2BQ9UMN6 2715 aaPredicted RBP3.67□□□□□ -1.82
USP8-201ENST00000307179 SPTAN1Q13813 2472 aaKnown RBP3.67□□□□□ -1.82
USP8-201ENST00000307179 C19orf84I3L1E1 186 aa3.67□□□□□ -1.82
USP8-201ENST00000307179 IGKV4-1P06312 121 aa3.67□□□□□ -1.82
USP8-201ENST00000307179 WFDC11Q8NEX6 87 aa3.67□□□□□ -1.82
USP8-201ENST00000307179 CEP295Q9C0D2 2601 aa3.67□□□□□ -1.82
USP8-201ENST00000307179 CSNK1G2-AS1Q8NCQ2 148 aa3.66□□□□□ -1.82
USP8-201ENST00000307179 CELSR1Q9NYQ6 3014 aa3.66□□□□□ -1.82
USP8-201ENST00000307179 ZFHX2Q9C0A1 2572 aaPredicted RBP3.66□□□□□ -1.82
USP8-201ENST00000307179 Q6ZTC4 211 aa3.66□□□□□ -1.82
USP8-201ENST00000307179 CHCHD10Q8WYQ3 142 aaPredicted RBP3.66□□□□□ -1.82
USP8-201ENST00000307179 CYP4F30PQ9H0H9 118 aa3.66□□□□□ -1.82
USP8-201ENST00000307179 PRO0255Q9UI72 69 aa3.66□□□□□ -1.82
USP8-201ENST00000307179 PKIGQ9Y2B9 76 aa3.66□□□□□ -1.82
USP8-201ENST00000307179 ZNF73O43830 326 aaPredicted RBP3.65□□□□□ -1.82
USP8-201ENST00000307179 RNASE1P07998 156 aaKnown RBP3.65□□□□□ -1.82
USP8-201ENST00000307179 hDV103S1A0JD37 113 aa3.65□□□□□ -1.82
USP8-201ENST00000307179 GIG44P09565 113 aaPredicted RBP3.65□□□□□ -1.82
USP8-201ENST00000307179 DEFB136Q30KP8 78 aa3.65□□□□□ -1.82
USP8-201ENST00000307179 NDUFB1O75438 58 aa3.65□□□□□ -1.83
USP8-201ENST00000307179 ZFHX3Q15911 3703 aa3.65□□□□□ -1.83
USP8-201ENST00000307179 AKAP13Q12802 2813 aa3.65□□□□□ -1.83
USP8-201ENST00000307179 GYPEP15421 78 aa3.65□□□□□ -1.83
USP8-201ENST00000307179 DAD1P61803 113 aa3.65□□□□□ -1.83
USP8-201ENST00000307179 SPAG11BQ08648 103 aa3.65□□□□□ -1.83
USP8-201ENST00000307179 SPTBN1Q01082 2364 aaKnown RBP3.64□□□□□ -1.83
USP8-201ENST00000307179 M0R378 163 aa3.64□□□□□ -1.83
USP8-201ENST00000307179 LINC00474Q9P2X8 69 aa3.64□□□□□ -1.83
USP8-201ENST00000307179 REG3AQ06141 175 aa3.64□□□□□ -1.83
USP8-201ENST00000307179 ACACAQ13085 2346 aa3.64□□□□□ -1.83
USP8-201ENST00000307179 SPTA1P02549 2419 aa3.64□□□□□ -1.83
USP8-201ENST00000307179 HIGD2BQ4VC39 106 aa3.64□□□□□ -1.83
USP8-201ENST00000307179 C18orf65Q6ZTR6 163 aa3.64□□□□□ -1.83
USP8-201ENST00000307179 DCHS2Q6V1P9 2916 aa3.63□□□□□ -1.83
USP8-201ENST00000307179 KHDC1LQ5JSQ8 128 aa3.63□□□□□ -1.83
USP8-201ENST00000307179 HRNRQ86YZ3 2850 aaPredicted RBP3.63□□□□□ -1.83
USP8-201ENST00000307179 AKAP6Q13023 2319 aa3.63□□□□□ -1.83
USP8-201ENST00000307179 M0R2N4 97 aa3.63□□□□□ -1.83
USP8-201ENST00000307179 IGLV1-51P01701 117 aa3.63□□□□□ -1.83
USP8-201ENST00000307179 PRR3P79522 188 aaKnown RBP3.63□□□□□ -1.83
USP8-201ENST00000307179 PMAIP1Q13794 54 aa3.63□□□□□ -1.83
USP8-201ENST00000307179 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.63□□□□□ -1.832e-6■■■■■ 37.7
USP8-201ENST00000307179 LINC00528Q8N1L1 170 aa3.62□□□□□ -1.83
USP8-201ENST00000307179 ANKRD11Q6UB99 2663 aaPredicted RBP3.62□□□□□ -1.83
USP8-201ENST00000307179 ZCCHC13Q8WW36 166 aaKnown RBP3.62□□□□□ -1.83
USP8-201ENST00000307179 C19orf73Q9NVV2 129 aa3.62□□□□□ -1.83
USP8-201ENST00000307179 VPS13CQ709C8 3753 aa3.62□□□□□ -1.83
USP8-201ENST00000307179 H3BPC8 53 aa3.62□□□□□ -1.83
USP8-201ENST00000307179 EGFEM1PQ0D2K5 195 aa3.62□□□□□ -1.83
USP8-201ENST00000307179 LINC00269Q8N2A0 174 aa3.62□□□□□ -1.83
USP8-201ENST00000307179 COL6A6A6NMZ7 2263 aa3.62□□□□□ -1.83
USP8-201ENST00000307179 IGLV5-48A0A075B6I7 105 aa3.62□□□□□ -1.83
USP8-201ENST00000307179 PRR34Q9NV39 138 aa3.62□□□□□ -1.83
USP8-201ENST00000307179 LELP1Q5T871 98 aa3.61□□□□□ -1.83
USP8-201ENST00000307179 FAM229BQ4G0N7 80 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms