RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 TRBV30A0A0K0K1B3 111 aa7.03□□□□□ -1.28
CSPG4P1Y-201ENST00000306641 ZNF22P17026 224 aaPredicted RBP7.03□□□□□ -1.28
CSPG4P1Y-201ENST00000306641 GAGE2BQ13066 116 aa7.03□□□□□ -1.28
CSPG4P1Y-201ENST00000306641 KIAA0087Q14695 138 aa7.03□□□□□ -1.28
CSPG4P1Y-201ENST00000306641 TMEM170BQ5T4T1 132 aa7.03□□□□□ -1.28
CSPG4P1Y-201ENST00000306641 UNQ6190/PRO20217Q6UXQ8 127 aa7.03□□□□□ -1.28
CSPG4P1Y-201ENST00000306641 COX7B2Q8TF08 81 aa7.03□□□□□ -1.28
CSPG4P1Y-201ENST00000306641 F8VRH5 84 aa7.02□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 PANO1I0J062 215 aa7.02□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 NUPR1O60356 82 aa7.02□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 FABP4P15090 132 aa7.02□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 CIRBPQ14011 172 aaKnown RBP7.02□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 Q5VSD8 79 aa7.02□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 C6orf48Q9UBA6 75 aa7.02□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 A0A087WYN8 130 aa7.01□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 C11orf86A6NJI1 115 aa7.01□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 PTTG1IPP53801 180 aa7.01□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 C10orf25Q5T742 122 aa7.01□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 C2orf82Q6UX34 121 aa7.01□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 LINC00528Q8N1L1 170 aa7.01□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 STPG4Q8N801 248 aa7.01□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 MAP1LC3CQ9BXW4 147 aa7□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 KIAA1109Q2LD37 5005 aa6.99□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 PLA2G1BP04054 148 aaKnown RBP6.99□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 TLX1NBP0CAT3 122 aa6.99□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 ODF1Q14990 250 aa6.99□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 PLAC8Q9NZF1 115 aa6.99□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 NDUFC2-KCTD14E9PQ53 114 aa6.98□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 PLNP26678 52 aa6.98□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 GAGE2EQ4V326 116 aa6.98□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 C7orf33Q8WU49 177 aa6.98□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 GAGE2DQ9UEU5 116 aa6.98□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 APOBP04114 4563 aaKnown RBP6.98□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 IGLV5-39A0A0G2JS06 123 aa6.97□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 C9orf116Q5BN46 136 aaPredicted RBP6.97□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 SFTA2Q6UW10 78 aa6.97□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 Q6ZRP5 223 aa6.97□□□□□ -1.29
CSPG4P1Y-201ENST00000306641 TMEM223A0PJW6 202 aa6.96□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 DPM2O94777 84 aa6.96□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 RPL37AP61513 92 aaKnown RBP6.96□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 HERVK_113P61574 105 aa6.96□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 COA6Q5JTJ3 125 aaKnown RBP6.96□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 HSPG2P98160 4391 aa6.96□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 RYR1P21817 5038 aa6.96□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 IGKCP01834 107 aa6.95□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 SYS1-DBNDD2H3BUS1 97 aa6.94□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 S100A6P06703 90 aa6.94□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 PMCHL2Q9BQD1 86 aa6.94□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 KRTAP17-1Q9BYP8 105 aa6.94□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 KRTAP4-5Q9BYR2 181 aa6.94□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 DNAH8Q96JB1 4490 aa6.93□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 FAM19A5Q7Z5A7 132 aaPredicted RBP6.93□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 A0A1W2PNN7 141 aa6.92□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 INAFM2P0DMQ5 153 aa6.92□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 S100A2P29034 98 aa6.92□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 KRTDAPP60985 99 aa6.92□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 PET117Q6UWS5 81 aa6.92□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 ERG28Q9UKR5 140 aa6.92□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 HERC2O95714 4834 aa6.91□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 C20orf202A1L168 122 aa6.91□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 PFN2P35080 140 aa6.91□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 COX17Q14061 63 aa6.91□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 PLEKHB2Q96CS7 222 aa6.91□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 ZNF625Q96I27 306 aaPredicted RBP6.91□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 FAM168BA1KXE4 195 aa6.9□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 M0QXV9 152 aa6.9□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 LEPROTO15243 131 aa6.9□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 C3orf79P0CE67 100 aa6.9□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 HERV-K104P63124 156 aa6.9□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 MEIG1Q5JSS6 88 aa6.9□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 C9orf129Q5T035 196 aaKnown RBP6.9□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 XAGE1AQ9HD64 81 aa6.9□□□□□ -1.3
CSPG4P1Y-201ENST00000306641 MYMXA0A1B0GTQ4 84 aa6.89□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 LGALS3P17931 250 aaKnown RBP6.89□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 LINC01545Q5VT33 79 aa6.89□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 PHF5AQ7RTV0 110 aaKnown RBP6.89□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 NDUFA12Q9UI09 145 aa6.89□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 LINC00587B1AMM8 73 aa6.88□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 J3QQQ9 107 aa6.88□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 LINC00158P58513 81 aa6.88□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 UBE2BP63146 152 aa6.88□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 NMUP48645 174 aa6.87□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 AKR1D1P51857 326 aa6.87□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 PRR3P79522 188 aaKnown RBP6.87□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 HIST3H2BBQ8N257 126 aa6.87□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 E9PLD3 99 aa6.86□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 TSPEAR-AS2P59090 65 aa6.86□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 LBHQ53QV2 105 aaPredicted RBP6.86□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 SERTAD4-AS1Q5TG53 156 aa6.86□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 NKAPP1Q8N9T2 125 aa6.86□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 A0A0U1RRA0 63 aa6.85□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 KRTAP10-4P60372 401 aaPredicted RBP6.85□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 SND1-IT1Q9HBX3 110 aa6.85□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 PLA2G2DQ9UNK4 145 aa6.85□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 SMIM13P0DJ93 91 aa6.84□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 RPL24P83731 157 aaKnown RBP6.84□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 MRPL55Q7Z7F7 128 aaKnown RBP6.84□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 HIST1H2BLQ99880 126 aa6.84□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 TP73-AS1Q9UF72 201 aa6.84□□□□□ -1.31
CSPG4P1Y-201ENST00000306641 C22orf24Q9Y442 160 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms