RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 S100A12P80511 92 aa9.95□□□□□ -0.82
UBXN1-202ENST00000301935 Q5VSD8 79 aa9.95□□□□□ -0.82
UBXN1-202ENST00000301935 SFTA2Q6UW10 78 aa9.95□□□□□ -0.82
UBXN1-202ENST00000301935 Q8IZM0 81 aa9.95□□□□□ -0.82
UBXN1-202ENST00000301935 VAMP8Q9BV40 100 aa9.95□□□□□ -0.82
UBXN1-202ENST00000301935 MYCBP2O75592 4640 aa9.95□□□□□ -0.82
UBXN1-202ENST00000301935 STPG4Q8N801 248 aa9.94□□□□□ -0.82
UBXN1-202ENST00000301935 ORAOV1Q8WV07 137 aa9.94□□□□□ -0.82
UBXN1-202ENST00000301935 VPS13BQ7Z7G8 4022 aa9.94□□□□□ -0.82
UBXN1-202ENST00000301935 ZNF561-AS1K7EIQ3 104 aa9.93□□□□□ -0.82
UBXN1-202ENST00000301935 CXCL5P42830 114 aa9.93□□□□□ -0.82
UBXN1-202ENST00000301935 C6orf226Q5I0X4 101 aa9.93□□□□□ -0.82
UBXN1-202ENST00000301935 COX7B2Q8TF08 81 aa9.93□□□□□ -0.82
UBXN1-202ENST00000301935 DMBT1Q9UGM3 2413 aaPredicted RBP9.92□□□□□ -0.82
UBXN1-202ENST00000301935 GVQW2A0A096LPI5 108 aaPredicted RBP9.92□□□□□ -0.82
UBXN1-202ENST00000301935 hDV102S1A0JD36 115 aa9.92□□□□□ -0.82
UBXN1-202ENST00000301935 USP17L23D6RBM5 183 aa9.92□□□□□ -0.82
UBXN1-202ENST00000301935 NMUP48645 174 aa9.92□□□□□ -0.82
UBXN1-202ENST00000301935 C2orf48Q96LS8 159 aa9.92□□□□□ -0.82
UBXN1-202ENST00000301935 A0A087WTM6 91 aa9.91□□□□□ -0.82
UBXN1-202ENST00000301935 J3QQQ9 107 aa9.91□□□□□ -0.82
UBXN1-202ENST00000301935 SPAG11BQ08648 103 aa9.91□□□□□ -0.82
UBXN1-202ENST00000301935 C15orf56Q8N910 161 aa9.91□□□□□ -0.82
UBXN1-202ENST00000301935 LGALS3P17931 250 aaKnown RBP9.9□□□□□ -0.82
UBXN1-202ENST00000301935 KRTAP10-1P60331 282 aa9.9□□□□□ -0.82
UBXN1-202ENST00000301935 CKS1BP61024 79 aa9.9□□□□□ -0.82
UBXN1-202ENST00000301935 TOMM7Q9P0U1 55 aa9.9□□□□□ -0.82
UBXN1-202ENST00000301935 LRCOL1A6NCL2 159 aa9.89□□□□□ -0.83
UBXN1-202ENST00000301935 KIAA0087Q14695 138 aa9.89□□□□□ -0.83
UBXN1-202ENST00000301935 ANKRD39Q53RE8 183 aa9.89□□□□□ -0.83
UBXN1-202ENST00000301935 MYMXA0A1B0GTQ4 84 aa9.88□□□□□ -0.83
UBXN1-202ENST00000301935 HERV-K104P63124 156 aa9.88□□□□□ -0.83
UBXN1-202ENST00000301935 MAJINQ3KP22 176 aa9.88□□□□□ -0.83
UBXN1-202ENST00000301935 SPATA45Q537H7 98 aa9.88□□□□□ -0.83
UBXN1-202ENST00000301935 NTN5Q8WTR8 489 aaPredicted RBP9.88□□□□□ -0.83
UBXN1-202ENST00000301935 PAM16Q9Y3D7 125 aa9.88□□□□□ -0.83
UBXN1-202ENST00000301935 LINC00587B1AMM8 73 aa9.87□□□□□ -0.83
UBXN1-202ENST00000301935 NDUFA1O15239 70 aa9.87□□□□□ -0.83
UBXN1-202ENST00000301935 NDUFA12Q9UI09 145 aa9.87□□□□□ -0.83
UBXN1-202ENST00000301935 HIGD2BQ4VC39 106 aa9.86□□□□□ -0.83
UBXN1-202ENST00000301935 IGKV2D-26A0A0A0MRZ7 120 aa9.85□□□□□ -0.83
UBXN1-202ENST00000301935 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.85□□□□□ -0.83
UBXN1-202ENST00000301935 LECT2O14960 151 aa9.85□□□□□ -0.83
UBXN1-202ENST00000301935 SMR3BP02814 79 aaPredicted RBP9.85□□□□□ -0.83
UBXN1-202ENST00000301935 GCSHP23434 173 aa9.85□□□□□ -0.83
UBXN1-202ENST00000301935 RNF151Q2KHN1 245 aa9.85□□□□□ -0.83
UBXN1-202ENST00000301935 CAMK2N2Q96S95 79 aa9.85□□□□□ -0.83
UBXN1-202ENST00000301935 C12orf57Q99622 126 aa9.85□□□□□ -0.83
UBXN1-202ENST00000301935 TRBV30A0A0K0K1B3 111 aa9.84□□□□□ -0.83
UBXN1-202ENST00000301935 DLEU1O43261 78 aa9.84□□□□□ -0.83
UBXN1-202ENST00000301935 COX8AP10176 69 aa9.84□□□□□ -0.83
UBXN1-202ENST00000301935 CNBPP62633 177 aaKnown RBP9.84□□□□□ -0.83
UBXN1-202ENST00000301935 SYCNQ0VAF6 134 aa9.84□□□□□ -0.83
UBXN1-202ENST00000301935 Q8N814 137 aa9.84□□□□□ -0.83
UBXN1-202ENST00000301935 ZNF625Q96I27 306 aaPredicted RBP9.84□□□□□ -0.83
UBXN1-202ENST00000301935 ZNF815PA8K554 130 aa9.83□□□□□ -0.84
UBXN1-202ENST00000301935 TSPEAR-AS2P59090 65 aa9.83□□□□□ -0.84
UBXN1-202ENST00000301935 LINC00518Q8N0U6 118 aa9.83□□□□□ -0.84
UBXN1-202ENST00000301935 PKIGQ9Y2B9 76 aa9.83□□□□□ -0.84
UBXN1-202ENST00000301935 DNAH8Q96JB1 4490 aa9.82□□□□□ -0.84
UBXN1-202ENST00000301935 HAMPP81172 84 aa9.82□□□□□ -0.84
UBXN1-202ENST00000301935 WFDC2Q14508 124 aa9.82□□□□□ -0.84
UBXN1-202ENST00000301935 SLC25A34Q6PIV7 304 aa9.82□□□□□ -0.84
UBXN1-202ENST00000301935 BOD1L2Q8IYS8 172 aa9.82□□□□□ -0.84
UBXN1-202ENST00000301935 FAM229AH3BQW9 127 aa9.81□□□□□ -0.84
UBXN1-202ENST00000301935 CIRBPQ14011 172 aaKnown RBP9.81□□□□□ -0.84
UBXN1-202ENST00000301935 COX17Q14061 63 aa9.81□□□□□ -0.84
UBXN1-202ENST00000301935 UNQ6190/PRO20217Q6UXQ8 127 aa9.81□□□□□ -0.84
UBXN1-202ENST00000301935 PCP2Q8IVA1 136 aa9.81□□□□□ -0.84
UBXN1-202ENST00000301935 CARD19Q96LW7 228 aa9.81□□□□□ -0.84
UBXN1-202ENST00000301935 SRRM2Q9UQ35 2752 aaKnown RBP9.8□□□□□ -0.84
UBXN1-202ENST00000301935 IGLV5-52A0A0A0MRZ9 124 aa9.8□□□□□ -0.84
UBXN1-202ENST00000301935 C2orf82Q6UX34 121 aa9.8□□□□□ -0.84
UBXN1-202ENST00000301935 LINC00526Q96FQ7 95 aa9.8□□□□□ -0.84
UBXN1-202ENST00000301935 FLG2Q5D862 2391 aaPredicted RBP9.8□□□□□ -0.84
UBXN1-202ENST00000301935 TIMM17BO60830 172 aa9.79□□□□□ -0.84
UBXN1-202ENST00000301935 SCGB1D4Q6XE38 83 aa9.79□□□□□ -0.84
UBXN1-202ENST00000301935 Q6ZRU5 148 aa9.79□□□□□ -0.84
UBXN1-202ENST00000301935 C14orf144Q96I85 54 aa9.79□□□□□ -0.84
UBXN1-202ENST00000301935 UQCR10Q9UDW1 63 aa9.78□□□□□ -0.84
UBXN1-202ENST00000301935 A0A0J9YXY3 114 aa9.77□□□□□ -0.85
UBXN1-202ENST00000301935 SLPIP03973 132 aa9.77□□□□□ -0.85
UBXN1-202ENST00000301935 MEIG1Q5JSS6 88 aa9.77□□□□□ -0.85
UBXN1-202ENST00000301935 C10orf25Q5T742 122 aa9.77□□□□□ -0.85
UBXN1-202ENST00000301935 C6orf48Q9UBA6 75 aa9.77□□□□□ -0.85
UBXN1-202ENST00000301935 ERG28Q9UKR5 140 aa9.77□□□□□ -0.85
UBXN1-202ENST00000301935 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.76□□□□□ -0.85
UBXN1-202ENST00000301935 TSTD3H0UI37 97 aa9.76□□□□□ -0.85
UBXN1-202ENST00000301935 C9orf163Q8N9P6 203 aa9.76□□□□□ -0.85
UBXN1-202ENST00000301935 TTTY13Q9BZ97 58 aa9.76□□□□□ -0.85
UBXN1-202ENST00000301935 TMEM238C9JI98 176 aa9.75□□□□□ -0.85
UBXN1-202ENST00000301935 TLX1NBP0CAT3 122 aa9.75□□□□□ -0.85
UBXN1-202ENST00000301935 Q6ZVH6 145 aa9.75□□□□□ -0.85
UBXN1-202ENST00000301935 HIGD1BQ9P298 99 aa9.75□□□□□ -0.85
UBXN1-202ENST00000301935 LOC107984640A0A0U1RRK4 108 aa9.74□□□□□ -0.85
UBXN1-202ENST00000301935 NDUFC2-KCTD14E9PQ53 114 aa9.74□□□□□ -0.85
UBXN1-202ENST00000301935 J3QL48 77 aa9.74□□□□□ -0.85
UBXN1-202ENST00000301935 LINC00158P58513 81 aa9.74□□□□□ -0.85
UBXN1-202ENST00000301935 COPS9Q8WXC6 57 aa9.74□□□□□ -0.85
UBXN1-202ENST00000301935 MIEN1Q9BRT3 115 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms