RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 SETD2Q9BYW2 2564 aaPredicted RBP8.9□□□□□ -0.98
ABCA3-201ENST00000301732 AVPP01185 164 aa8.9□□□□□ -0.98
ABCA3-201ENST00000301732 TRAV7A0A075B6U4 112 aa8.9□□□□□ -0.98
ABCA3-201ENST00000301732 SMIM1B2RUZ4 78 aa8.9□□□□□ -0.99
ABCA3-201ENST00000301732 LINC01006Q8NI28 216 aa8.9□□□□□ -0.99
ABCA3-201ENST00000301732 IMUPQ9GZP8 106 aa8.9□□□□□ -0.99
ABCA3-201ENST00000301732 CSDC2Q9Y534 153 aaKnown RBP8.9□□□□□ -0.99
ABCA3-201ENST00000301732 PLA2G1BP04054 148 aaKnown RBP8.9□□□□□ -0.99
ABCA3-201ENST00000301732 MRPS36P82909 103 aaKnown RBP8.9□□□□□ -0.99
ABCA3-201ENST00000301732 LINC00846Q9NV44 126 aa8.89□□□□□ -0.99
ABCA3-201ENST00000301732 PRLHP81277 87 aa8.89□□□□□ -0.99
ABCA3-201ENST00000301732 H0Y9P7 68 aa8.89□□□□□ -0.99
ABCA3-201ENST00000301732 ATP5EP56381 51 aaPredicted RBP8.88□□□□□ -0.99
ABCA3-201ENST00000301732 LINC01556Q5JQF7 62 aa8.88□□□□□ -0.99
ABCA3-201ENST00000301732 LELP1Q5T871 98 aa8.88□□□□□ -0.99
ABCA3-201ENST00000301732 KLLNB2CW77 178 aa8.87□□□□□ -0.99
ABCA3-201ENST00000301732 SHISA2Q6UWI4 295 aa8.87□□□□□ -0.99
ABCA3-201ENST00000301732 ZFYVE26Q68DK2 2539 aa8.87□□□□□ -0.99
ABCA3-201ENST00000301732 TRAV10A0A0B4J240 114 aa8.87□□□□□ -0.99
ABCA3-201ENST00000301732 CHCHD7Q9BUK0 85 aa8.87□□□□□ -0.99
ABCA3-201ENST00000301732 RAI1Q7Z5J4 1906 aaPredicted RBP8.86□□□□□ -0.99
ABCA3-201ENST00000301732 TLN1Q9Y490 2541 aaKnown RBP8.86□□□□□ -0.99
ABCA3-201ENST00000301732 LINC00574Q9H8X3 128 aa8.86□□□□□ -0.99
ABCA3-201ENST00000301732 CEP192Q8TEP8 1941 aa8.86□□□□□ -0.99
ABCA3-201ENST00000301732 Q9BRP9 147 aa8.86□□□□□ -0.99
ABCA3-201ENST00000301732 REG3GQ6UW15 175 aa8.86□□□□□ -0.99
ABCA3-201ENST00000301732 IGKV2D-30A0A075B6S6 120 aa8.85□□□□□ -0.99
ABCA3-201ENST00000301732 IGKV2-30P06310 120 aa8.85□□□□□ -0.99
ABCA3-201ENST00000301732 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.85□□□□□ -0.99
ABCA3-201ENST00000301732 HCG22E2RYF7 251 aa8.85□□□□□ -0.99
ABCA3-201ENST00000301732 Q6ZTC4 211 aa8.84□□□□□ -0.99
ABCA3-201ENST00000301732 Q8IZM0 81 aa8.84□□□□□ -0.99
ABCA3-201ENST00000301732 FSTL3O95633 263 aa8.84□□□□□ -0.99
ABCA3-201ENST00000301732 MRGPRG-AS1Q2M3A8 158 aa8.83□□□□□ -1
ABCA3-201ENST00000301732 SMIM29Q86T20 159 aa8.83□□□□□ -1
ABCA3-201ENST00000301732 A0A096LNJ9 63 aa8.83□□□□□ -1
ABCA3-201ENST00000301732 KRTAP10-9P60411 292 aa8.82□□□□□ -1
ABCA3-201ENST00000301732 C11orf71Q6IPW1 123 aa8.82□□□□□ -1
ABCA3-201ENST00000301732 LRP4O75096 1905 aa8.81□□□□□ -1
ABCA3-201ENST00000301732 ODF3L2Q3SX64 289 aa8.81□□□□□ -1
ABCA3-201ENST00000301732 FSHBP01225 129 aa8.81□□□□□ -1
ABCA3-201ENST00000301732 SPAG11AQ6PDA7 123 aa8.81□□□□□ -1
ABCA3-201ENST00000301732 TMEM254Q8TBM7 123 aa8.81□□□□□ -1
ABCA3-201ENST00000301732 FN1P02751 2386 aaKnown RBP8.8□□□□□ -1
ABCA3-201ENST00000301732 SERTAD4-AS1Q5TG53 156 aa8.8□□□□□ -1
ABCA3-201ENST00000301732 ZNF706Q9Y5V0 76 aaPredicted RBP8.8□□□□□ -1
ABCA3-201ENST00000301732 CDIP1Q9H305 208 aa8.8□□□□□ -1
ABCA3-201ENST00000301732 COX17Q14061 63 aa8.79□□□□□ -1
ABCA3-201ENST00000301732 FBXL19-AS1Q494R0 122 aa8.79□□□□□ -1
ABCA3-201ENST00000301732 PSMG3-AS1Q96PY0 264 aa8.79□□□□□ -1
ABCA3-201ENST00000301732 RPL28P46779 137 aaKnown RBP8.79□□□□□ -1
ABCA3-201ENST00000301732 LINC00337Q8N6G1 96 aa8.78□□□□□ -1
ABCA3-201ENST00000301732 Q8N6K4 173 aa8.78□□□□□ -1
ABCA3-201ENST00000301732 IGLV5-52A0A0A0MRZ9 124 aa8.77□□□□□ -1.01
ABCA3-201ENST00000301732 PRORYQ9H606 182 aa8.77□□□□□ -1.01
ABCA3-201ENST00000301732 ABCA12Q86UK0 2595 aa8.77□□□□□ -1.01
ABCA3-201ENST00000301732 FHL2Q14192 279 aa8.77□□□□□ -1.01
ABCA3-201ENST00000301732 IGLV1-40P01703 118 aa8.76□□□□□ -1.01
ABCA3-201ENST00000301732 Q6ZRU5 148 aa8.76□□□□□ -1.01
ABCA3-201ENST00000301732 C1orf64Q8NEQ6 169 aa8.76□□□□□ -1.01
ABCA3-201ENST00000301732 Q8N2B8 174 aa8.76□□□□□ -1.01
ABCA3-201ENST00000301732 C7orf65Q6ZTY9 151 aa8.75□□□□□ -1.01
ABCA3-201ENST00000301732 IL17DQ8TAD2 202 aa8.75□□□□□ -1.01
ABCA3-201ENST00000301732 F8P00451 2351 aa8.74□□□□□ -1.01
ABCA3-201ENST00000301732 RPL37AP61513 92 aaKnown RBP8.74□□□□□ -1.01
ABCA3-201ENST00000301732 KIAA0087Q14695 138 aa8.74□□□□□ -1.01
ABCA3-201ENST00000301732 MUC7Q8TAX7 377 aa8.72□□□□□ -1.01
ABCA3-201ENST00000301732 ZNF462Q96JM2 2506 aa8.72□□□□□ -1.01
ABCA3-201ENST00000301732 SPACA4Q8TDM5 124 aa8.72□□□□□ -1.01
ABCA3-201ENST00000301732 FAM218AQ96MZ4 157 aa8.72□□□□□ -1.01
ABCA3-201ENST00000301732 CHTF8P0CG12 524 aa8.71□□□□□ -1.02
ABCA3-201ENST00000301732 NUPR2A6NF83 97 aa8.71□□□□□ -1.02
ABCA3-201ENST00000301732 CNFNQ9BYD5 112 aa8.71□□□□□ -1.02
ABCA3-201ENST00000301732 SMCPP49901 116 aaPredicted RBP8.7□□□□□ -1.02
ABCA3-201ENST00000301732 C2orf48Q96LS8 159 aa8.7□□□□□ -1.02
ABCA3-201ENST00000301732 EGFEM1PQ0D2K5 195 aa8.7□□□□□ -1.02
ABCA3-201ENST00000301732 EP400Q96L91 3159 aa8.7□□□□□ -1.02
ABCA3-201ENST00000301732 AMELXQ99217 191 aa8.69□□□□□ -1.02
ABCA3-201ENST00000301732 A0A1B0GU69 56 aa8.69□□□□□ -1.02
ABCA3-201ENST00000301732 SMCR5Q8TEV8 140 aa8.69□□□□□ -1.02
ABCA3-201ENST00000301732 SPATA3Q8NHX4 192 aa8.68□□□□□ -1.02
ABCA3-201ENST00000301732 PKD1L2Q7Z442 2459 aa8.68□□□□□ -1.02
ABCA3-201ENST00000301732 SPINT4Q6UDR6 99 aa8.68□□□□□ -1.02
ABCA3-201ENST00000301732 PTPRSQ13332 1948 aa8.68□□□□□ -1.02
ABCA3-201ENST00000301732 PIEZO1Q92508 2521 aa8.67□□□□□ -1.02
ABCA3-201ENST00000301732 PTPRBP23467 1997 aa8.67□□□□□ -1.02
ABCA3-201ENST00000301732 C22orf24Q9Y442 160 aa8.67□□□□□ -1.02
ABCA3-201ENST00000301732 USP9XQ93008 2570 aaPredicted RBP8.67□□□□□ -1.02
ABCA3-201ENST00000301732 A0A1W2PPR1 153 aa8.67□□□□□ -1.02
ABCA3-201ENST00000301732 COL5A1P20908 1838 aaPredicted RBP8.67□□□□□ -1.02
ABCA3-201ENST00000301732 LYPD5Q6UWN5 251 aa8.66□□□□□ -1.02
ABCA3-201ENST00000301732 LRRK2Q5S007 2527 aa8.66□□□□□ -1.02
ABCA3-201ENST00000301732 MOBPQ13875 183 aa8.66□□□□□ -1.02
ABCA3-201ENST00000301732 TM2D3Q9BRN9 247 aa8.65□□□□□ -1.02
ABCA3-201ENST00000301732 LINC00474Q9P2X8 69 aa8.64□□□□□ -1.03
ABCA3-201ENST00000301732 ADAMTS20P59510 1910 aa8.64□□□□□ -1.03
ABCA3-201ENST00000301732 COL4A4P53420 1690 aaPredicted RBP8.64□□□□□ -1.03
ABCA3-201ENST00000301732 ST20-AS1Q8NBB2 130 aa8.63□□□□□ -1.03
ABCA3-201ENST00000301732 PRO0628Q9UI54 55 aa8.63□□□□□ -1.03
ABCA3-201ENST00000301732 UTRNP46939 3433 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms