RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 SMIM1B2RUZ4 78 aa11.43□□□□□ -0.58
SPSB3-201ENST00000301717 SPINK8P0C7L1 97 aa11.43□□□□□ -0.58
SPSB3-201ENST00000301717 RNF151Q2KHN1 245 aa11.43□□□□□ -0.58
SPSB3-201ENST00000301717 Q6ZRP5 223 aa11.43□□□□□ -0.58
SPSB3-201ENST00000301717 IGLV5-45A0A087WSX0 123 aa11.43□□□□□ -0.58
SPSB3-201ENST00000301717 HIST1H2BKO60814 126 aa11.43□□□□□ -0.58
SPSB3-201ENST00000301717 HIST1H2BJP06899 126 aa11.43□□□□□ -0.58
SPSB3-201ENST00000301717 PRSS2P07478 247 aa11.43□□□□□ -0.58
SPSB3-201ENST00000301717 HIST1H2BOP23527 126 aa11.43□□□□□ -0.58
SPSB3-201ENST00000301717 HIST1H2BBP33778 126 aa11.43□□□□□ -0.58
SPSB3-201ENST00000301717 HIST1H2BDP58876 126 aa11.43□□□□□ -0.58
SPSB3-201ENST00000301717 HIST1H2BCP62807 126 aa11.43□□□□□ -0.58
SPSB3-201ENST00000301717 HIST2H2BEQ16778 126 aa11.43□□□□□ -0.58
SPSB3-201ENST00000301717 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.43□□□□□ -0.58
SPSB3-201ENST00000301717 BAGE3Q86Y29 109 aa11.43□□□□□ -0.58
SPSB3-201ENST00000301717 FAM19A2Q8N3H0 131 aa11.43□□□□□ -0.58
SPSB3-201ENST00000301717 HIST1H2BHQ93079 126 aa11.43□□□□□ -0.58
SPSB3-201ENST00000301717 HIST1H2BNQ99877 126 aa11.43□□□□□ -0.58
SPSB3-201ENST00000301717 HIST1H2BMQ99879 126 aa11.43□□□□□ -0.58
SPSB3-201ENST00000301717 LINC00474Q9P2X8 69 aa11.43□□□□□ -0.58
SPSB3-201ENST00000301717 LINC00310P59036 64 aa11.42□□□□□ -0.58
SPSB3-201ENST00000301717 C6orf226Q5I0X4 101 aa11.42□□□□□ -0.58
SPSB3-201ENST00000301717 CHCHD1Q96BP2 118 aaKnown RBP11.42□□□□□ -0.58
SPSB3-201ENST00000301717 PKIGQ9Y2B9 76 aa11.42□□□□□ -0.58
SPSB3-201ENST00000301717 F8WDY8 70 aa11.41□□□□□ -0.58
SPSB3-201ENST00000301717 GAGE2EQ4V326 116 aa11.41□□□□□ -0.58
SPSB3-201ENST00000301717 Q8IZM0 81 aa11.41□□□□□ -0.58
SPSB3-201ENST00000301717 GAGE2DQ9UEU5 116 aa11.41□□□□□ -0.58
SPSB3-201ENST00000301717 PKHD1L1Q86WI1 4243 aa11.41□□□□□ -0.58
SPSB3-201ENST00000301717 LRP1Q07954 4544 aaKnown RBP11.4□□□□□ -0.58
SPSB3-201ENST00000301717 FAM168BA1KXE4 195 aa11.4□□□□□ -0.58
SPSB3-201ENST00000301717 IGLC3P0DOY3 106 aa11.4□□□□□ -0.58
SPSB3-201ENST00000301717 CKS1BP61024 79 aa11.4□□□□□ -0.58
SPSB3-201ENST00000301717 ATP5LO75964 103 aa11.39□□□□□ -0.59
SPSB3-201ENST00000301717 DMBT1Q9UGM3 2413 aaPredicted RBP11.39□□□□□ -0.59
SPSB3-201ENST00000301717 TRBV30A0A0K0K1B3 111 aa11.38□□□□□ -0.59
SPSB3-201ENST00000301717 NUPR1O60356 82 aa11.38□□□□□ -0.59
SPSB3-201ENST00000301717 SERF1AO75920 110 aa11.38□□□□□ -0.59
SPSB3-201ENST00000301717 HSBP1O75506 76 aa11.37□□□□□ -0.59
SPSB3-201ENST00000301717 TLX1NBP0CAT3 122 aa11.37□□□□□ -0.59
SPSB3-201ENST00000301717 ZNF22P17026 224 aaPredicted RBP11.37□□□□□ -0.59
SPSB3-201ENST00000301717 COX7B2Q8TF08 81 aa11.37□□□□□ -0.59
SPSB3-201ENST00000301717 C7orf33Q8WU49 177 aa11.37□□□□□ -0.59
SPSB3-201ENST00000301717 C11orf86A6NJI1 115 aa11.36□□□□□ -0.59
SPSB3-201ENST00000301717 S100A6P06703 90 aa11.36□□□□□ -0.59
SPSB3-201ENST00000301717 PHF5AQ7RTV0 110 aaKnown RBP11.35□□□□□ -0.59
SPSB3-201ENST00000301717 IFI27L1Q96BM0 104 aa11.35□□□□□ -0.59
SPSB3-201ENST00000301717 NDUFC2-KCTD14E9PQ53 114 aa11.35□□□□□ -0.59
SPSB3-201ENST00000301717 FAM19A5Q7Z5A7 132 aaPredicted RBP11.35□□□□□ -0.59
SPSB3-201ENST00000301717 KRTAP7-1Q8IUC3 87 aa11.35□□□□□ -0.59
SPSB3-201ENST00000301717 HERC1Q15751 4861 aa11.34□□□□□ -0.59
SPSB3-201ENST00000301717 F8VRH5 84 aa11.34□□□□□ -0.59
SPSB3-201ENST00000301717 C9orf129Q5T035 196 aaKnown RBP11.34□□□□□ -0.59
SPSB3-201ENST00000301717 CHTOPQ9Y3Y2 248 aaKnown RBP11.34□□□□□ -0.59
SPSB3-201ENST00000301717 FAT3Q8TDW7 4589 aa11.33□□□□□ -0.6
SPSB3-201ENST00000301717 H3BRM9 83 aa11.33□□□□□ -0.6
SPSB3-201ENST00000301717 PRR3P79522 188 aaKnown RBP11.33□□□□□ -0.6
SPSB3-201ENST00000301717 COA6Q5JTJ3 125 aaKnown RBP11.33□□□□□ -0.6
SPSB3-201ENST00000301717 H0Y8G0 127 aa11.32□□□□□ -0.6
SPSB3-201ENST00000301717 TMEM170BQ5T4T1 132 aa11.32□□□□□ -0.6
SPSB3-201ENST00000301717 XAGE1AQ9HD64 81 aa11.32□□□□□ -0.6
SPSB3-201ENST00000301717 IGLV5-39A0A0G2JS06 123 aa11.31□□□□□ -0.6
SPSB3-201ENST00000301717 KRTAP11-1Q8IUC1 163 aa11.31□□□□□ -0.6
SPSB3-201ENST00000301717 AKR1D1P51857 326 aa11.3□□□□□ -0.6
SPSB3-201ENST00000301717 TRAV12-1A0A0B4J245 112 aa11.29□□□□□ -0.6
SPSB3-201ENST00000301717 FABP4P15090 132 aa11.29□□□□□ -0.6
SPSB3-201ENST00000301717 CXCL5P42830 114 aa11.29□□□□□ -0.6
SPSB3-201ENST00000301717 LEPROTL1O95214 131 aa11.28□□□□□ -0.6
SPSB3-201ENST00000301717 SERTAD4-AS1Q5TG53 156 aa11.28□□□□□ -0.6
SPSB3-201ENST00000301717 SNRPEP62304 92 aaKnown RBP11.26□□□□□ -0.61
SPSB3-201ENST00000301717 PSORS1C2Q9UIG4 136 aa11.26□□□□□ -0.61
SPSB3-201ENST00000301717 J3QL48 77 aa11.26□□□□□ -0.61
SPSB3-201ENST00000301717 M0QXV9 152 aa11.26□□□□□ -0.61
SPSB3-201ENST00000301717 ODF1Q14990 250 aa11.26□□□□□ -0.61
SPSB3-201ENST00000301717 ZNF625Q96I27 306 aaPredicted RBP11.26□□□□□ -0.61
SPSB3-201ENST00000301717 PMCHL2Q9BQD1 86 aa11.26□□□□□ -0.61
SPSB3-201ENST00000301717 TMEM223A0PJW6 202 aa11.25□□□□□ -0.61
SPSB3-201ENST00000301717 KRTAP29-1A8MX34 341 aaPredicted RBP11.25□□□□□ -0.61
SPSB3-201ENST00000301717 C5orf52A6NGY3 159 aa11.24□□□□□ -0.61
SPSB3-201ENST00000301717 S100A2P29034 98 aa11.24□□□□□ -0.61
SPSB3-201ENST00000301717 HIST3H2BBQ8N257 126 aa11.23□□□□□ -0.61
SPSB3-201ENST00000301717 PFN2P35080 140 aa11.22□□□□□ -0.61
SPSB3-201ENST00000301717 C1orf137Q5JT78 98 aa11.2□□□□□ -0.62
SPSB3-201ENST00000301717 LINC00518Q8N0U6 118 aa11.2□□□□□ -0.62
SPSB3-201ENST00000301717 HSPB8Q9UJY1 196 aa11.2□□□□□ -0.62
SPSB3-201ENST00000301717 C22orf24Q9Y442 160 aa11.2□□□□□ -0.62
SPSB3-201ENST00000301717 UBE2BP63146 152 aa11.19□□□□□ -0.62
SPSB3-201ENST00000301717 ERG28Q9UKR5 140 aa11.19□□□□□ -0.62
SPSB3-201ENST00000301717 OXTP01178 125 aa11.18□□□□□ -0.62
SPSB3-201ENST00000301717 SRSF9Q13242 221 aaKnown RBP eCLIP11.18□□□□□ -0.62
SPSB3-201ENST00000301717 A0A0U1RRA0 63 aa11.17□□□□□ -0.62
SPSB3-201ENST00000301717 HIST1H2BLQ99880 126 aa11.17□□□□□ -0.62
SPSB3-201ENST00000301717 TSPEAR-AS2P59090 65 aa11.16□□□□□ -0.62
SPSB3-201ENST00000301717 C12orf57Q99622 126 aa11.16□□□□□ -0.62
SPSB3-201ENST00000301717 GAGE10A6NGK3 116 aa11.15□□□□□ -0.62
SPSB3-201ENST00000301717 SMIM6P0DI80 62 aa11.15□□□□□ -0.62
SPSB3-201ENST00000301717 SND1-IT1Q9HBX3 110 aa11.15□□□□□ -0.62
SPSB3-201ENST00000301717 DPM2O94777 84 aa11.14□□□□□ -0.63
SPSB3-201ENST00000301717 MT1HL1P0DM35 61 aa11.14□□□□□ -0.63
SPSB3-201ENST00000301717 SPINK6Q6UWN8 80 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms