RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 COX7B2Q8TF08 81 aa14.58□□□□□ -0.08
LINC01116-201ENST00000295549 RNF151Q2KHN1 245 aa14.57□□□□□ -0.08
LINC01116-201ENST00000295549 UNQ6190/PRO20217Q6UXQ8 127 aa14.56□□□□□ -0.08
LINC01116-201ENST00000295549 SDIM1Q6ZPB5 146 aa14.56□□□□□ -0.08
LINC01116-201ENST00000295549 CXCL5P42830 114 aa14.55□□□□□ -0.08
LINC01116-201ENST00000295549 CKS1BP61024 79 aa14.55□□□□□ -0.08
LINC01116-201ENST00000295549 C10orf25Q5T742 122 aa14.55□□□□□ -0.08
LINC01116-201ENST00000295549 C2orf82Q6UX34 121 aa14.55□□□□□ -0.08
LINC01116-201ENST00000295549 DNAH8Q96JB1 4490 aa14.54□□□□□ -0.08
LINC01116-201ENST00000295549 TRBV30A0A0K0K1B3 111 aa14.53□□□□□ -0.08
LINC01116-201ENST00000295549 C20orf202A1L168 122 aa14.52□□□□□ -0.08
LINC01116-201ENST00000295549 BIRC6Q9NR09 4857 aa14.52□□□□□ -0.09
LINC01116-201ENST00000295549 C6orf48Q9UBA6 75 aa14.51□□□□□ -0.09
LINC01116-201ENST00000295549 PKIGQ9Y2B9 76 aa14.51□□□□□ -0.09
LINC01116-201ENST00000295549 Q6ZSA8 131 aa14.5□□□□□ -0.09
LINC01116-201ENST00000295549 AKR1D1P51857 326 aa14.49□□□□□ -0.09
LINC01116-201ENST00000295549 TMA7Q9Y2S6 64 aaKnown RBP14.49□□□□□ -0.09
LINC01116-201ENST00000295549 HERVK_113P61574 105 aa14.49□□□□□ -0.09
LINC01116-201ENST00000295549 FAM30AQ9NZY2 134 aa14.48□□□□□ -0.09
LINC01116-201ENST00000295549 LOC107984640A0A0U1RRK4 108 aa14.47□□□□□ -0.09
LINC01116-201ENST00000295549 SFTA2Q6UW10 78 aa14.47□□□□□ -0.09
LINC01116-201ENST00000295549 TLX1NBP0CAT3 122 aa14.46□□□□□ -0.09
LINC01116-201ENST00000295549 APOBP04114 4563 aaKnown RBP14.45□□□□□ -0.1
LINC01116-201ENST00000295549 LEPROTO15243 131 aa14.45□□□□□ -0.1
LINC01116-201ENST00000295549 CDK2AP2O75956 126 aa14.44□□□□□ -0.1
LINC01116-201ENST00000295549 CIRBPQ14011 172 aaKnown RBP14.44□□□□□ -0.1
LINC01116-201ENST00000295549 C9orf116Q5BN46 136 aaPredicted RBP14.44□□□□□ -0.1
LINC01116-201ENST00000295549 PLEKHB2Q96CS7 222 aa14.44□□□□□ -0.1
LINC01116-201ENST00000295549 ZNF625Q96I27 306 aaPredicted RBP14.44□□□□□ -0.1
LINC01116-201ENST00000295549 LINC00474Q9P2X8 69 aa14.43□□□□□ -0.1
LINC01116-201ENST00000295549 A0A096LNI7 61 aa14.42□□□□□ -0.1
LINC01116-201ENST00000295549 E9PLD3 99 aa14.42□□□□□ -0.1
LINC01116-201ENST00000295549 STPG4Q8N801 248 aa14.42□□□□□ -0.1
LINC01116-201ENST00000295549 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.42□□□□□ -0.1
LINC01116-201ENST00000295549 NDUFC2-KCTD14E9PQ53 114 aa14.41□□□□□ -0.1
LINC01116-201ENST00000295549 PANO1I0J062 215 aa14.41□□□□□ -0.1
LINC01116-201ENST00000295549 J3QQQ9 107 aa14.41□□□□□ -0.1
LINC01116-201ENST00000295549 PTTG1IPP53801 180 aa14.41□□□□□ -0.1
LINC01116-201ENST00000295549 XGP55808 180 aa14.41□□□□□ -0.1
LINC01116-201ENST00000295549 RPL18AQ02543 176 aaKnown RBP14.41□□□□□ -0.1
LINC01116-201ENST00000295549 Q6ZRP5 223 aa14.41□□□□□ -0.1
LINC01116-201ENST00000295549 SPACA4Q8TDM5 124 aa14.41□□□□□ -0.1
LINC01116-201ENST00000295549 IGKV2-24A0A0C4DH68 120 aa14.4□□□□□ -0.1
LINC01116-201ENST00000295549 CHTF8P0CG12 524 aa14.4□□□□□ -0.1
LINC01116-201ENST00000295549 TSPEAR-AS2P59090 65 aa14.4□□□□□ -0.1
LINC01116-201ENST00000295549 GAGE2BQ13066 116 aa14.4□□□□□ -0.1
LINC01116-201ENST00000295549 NDUFA12Q9UI09 145 aa14.4□□□□□ -0.1
LINC01116-201ENST00000295549 ATOH7Q8N100 152 aa14.39□□□□□ -0.11
LINC01116-201ENST00000295549 KIAA1109Q2LD37 5005 aa14.38□□□□□ -0.11
LINC01116-201ENST00000295549 NMUP48645 174 aa14.37□□□□□ -0.11
LINC01116-201ENST00000295549 HERV-K104P63124 156 aa14.37□□□□□ -0.11
LINC01116-201ENST00000295549 MYMXA0A1B0GTQ4 84 aa14.36□□□□□ -0.11
LINC01116-201ENST00000295549 SCGB1D1O95968 90 aa14.36□□□□□ -0.11
LINC01116-201ENST00000295549 LGALS3P17931 250 aaKnown RBP14.36□□□□□ -0.11
LINC01116-201ENST00000295549 COX17Q14061 63 aa14.36□□□□□ -0.11
LINC01116-201ENST00000295549 MAJINQ3KP22 176 aa14.36□□□□□ -0.11
LINC01116-201ENST00000295549 SCXQ7RTU7 201 aa14.36□□□□□ -0.11
LINC01116-201ENST00000295549 RYR1P21817 5038 aa14.35□□□□□ -0.11
LINC01116-201ENST00000295549 CIRBP-AS1Q8TBR5 109 aa14.35□□□□□ -0.11
LINC01116-201ENST00000295549 DPH3Q96FX2 82 aa14.35□□□□□ -0.11
LINC01116-201ENST00000295549 ERG28Q9UKR5 140 aa14.35□□□□□ -0.11
LINC01116-201ENST00000295549 GAGE2EQ4V326 116 aa14.34□□□□□ -0.11
LINC01116-201ENST00000295549 GAGE2DQ9UEU5 116 aa14.34□□□□□ -0.11
LINC01116-201ENST00000295549 HSPG2P98160 4391 aa14.34□□□□□ -0.11
LINC01116-201ENST00000295549 A0A087WYN8 130 aa14.32□□□□□ -0.12
LINC01116-201ENST00000295549 IGKV2D-26A0A0A0MRZ7 120 aa14.32□□□□□ -0.12
LINC01116-201ENST00000295549 HAMPP81172 84 aa14.32□□□□□ -0.12
LINC01116-201ENST00000295549 PLAC8Q9NZF1 115 aa14.32□□□□□ -0.12
LINC01116-201ENST00000295549 PFN2P35080 140 aa14.32□□□□□ -0.12
LINC01116-201ENST00000295549 LINC00587B1AMM8 73 aa14.31□□□□□ -0.12
LINC01116-201ENST00000295549 ANKRD39Q53RE8 183 aa14.31□□□□□ -0.12
LINC01116-201ENST00000295549 JOSD1Q15040 202 aaPredicted RBP14.29□□□□□ -0.12
LINC01116-201ENST00000295549 C9orf129Q5T035 196 aaKnown RBP14.29□□□□□ -0.12
LINC01116-201ENST00000295549 EPM2AB3EWF7 344 aa14.28□□□□□ -0.12
LINC01116-201ENST00000295549 HSBP1L1C9JCN9 74 aa14.28□□□□□ -0.12
LINC01116-201ENST00000295549 MEIG1Q5JSS6 88 aa14.27□□□□□ -0.12
LINC01116-201ENST00000295549 XAGE1AQ9HD64 81 aa14.27□□□□□ -0.12
LINC01116-201ENST00000295549 A0A1W2PNN7 141 aa14.26□□□□□ -0.13
LINC01116-201ENST00000295549 LINC00158P58513 81 aa14.26□□□□□ -0.13
LINC01116-201ENST00000295549 SMIM13P0DJ93 91 aa14.25□□□□□ -0.13
LINC01116-201ENST00000295549 A0A0J9YXY3 114 aa14.24□□□□□ -0.13
LINC01116-201ENST00000295549 ZNF815PA8K554 130 aa14.24□□□□□ -0.13
LINC01116-201ENST00000295549 TTTY13Q9BZ97 58 aa14.24□□□□□ -0.13
LINC01116-201ENST00000295549 SND1-IT1Q9HBX3 110 aa14.24□□□□□ -0.13
LINC01116-201ENST00000295549 A0A0U1RRA0 63 aa14.23□□□□□ -0.13
LINC01116-201ENST00000295549 FAM168BA1KXE4 195 aa14.22□□□□□ -0.13
LINC01116-201ENST00000295549 SMR3BP02814 79 aaPredicted RBP14.2□□□□□ -0.14
LINC01116-201ENST00000295549 PYY3Q5JQD4 70 aa14.2□□□□□ -0.14
LINC01116-201ENST00000295549 KRTAP7-1Q8IUC3 87 aa14.2□□□□□ -0.14
LINC01116-201ENST00000295549 PCP2Q8IVA1 136 aa14.2□□□□□ -0.14
LINC01116-201ENST00000295549 MIR7-3HGQ8N6C7 128 aa14.2□□□□□ -0.14
LINC01116-201ENST00000295549 PLA2G2DQ9UNK4 145 aa14.2□□□□□ -0.14
LINC01116-201ENST00000295549 FAT1Q14517 4588 aa14.19□□□□□ -0.14
LINC01116-201ENST00000295549 FAM19A5Q7Z5A7 132 aaPredicted RBP14.18□□□□□ -0.14
LINC01116-201ENST00000295549 TIMM17BO60830 172 aa14.17□□□□□ -0.14
LINC01116-201ENST00000295549 SERTAD4-AS1Q5TG53 156 aa14.17□□□□□ -0.14
LINC01116-201ENST00000295549 HERC2O95714 4834 aa14.17□□□□□ -0.14
LINC01116-201ENST00000295549 Q8N1X5 172 aa14.16□□□□□ -0.14
LINC01116-201ENST00000295549 LITAFQ99732 161 aa14.15□□□□□ -0.14
LINC01116-201ENST00000295549 LOC107984156A0A0G2JMH3 177 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms