RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 STPG4Q8N801 248 aa6.74□□□□□ -1.33
SNF8-201ENST00000290330 SRRM2Q9UQ35 2752 aaKnown RBP6.73□□□□□ -1.33
SNF8-201ENST00000290330 CNBPP62633 177 aaKnown RBP6.73□□□□□ -1.33
SNF8-201ENST00000290330 MRPS36P82909 103 aaKnown RBP6.73□□□□□ -1.33
SNF8-201ENST00000290330 COL5A1-AS1Q5SY13 56 aa6.73□□□□□ -1.33
SNF8-201ENST00000290330 SNHG12Q9BXW3 62 aa6.73□□□□□ -1.33
SNF8-201ENST00000290330 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.73□□□□□ -1.33
SNF8-201ENST00000290330 IGLV4-3A0A075B6K6 122 aa6.72□□□□□ -1.33
SNF8-201ENST00000290330 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.72□□□□□ -1.33
SNF8-201ENST00000290330 IGKV2-29A2NJV5 120 aaPredicted RBP6.72□□□□□ -1.33
SNF8-201ENST00000290330 C11orf86A6NJI1 115 aa6.72□□□□□ -1.33
SNF8-201ENST00000290330 E9PLD3 99 aa6.72□□□□□ -1.33
SNF8-201ENST00000290330 XP32Q5T750 250 aa6.72□□□□□ -1.33
SNF8-201ENST00000290330 HIGD1BQ9P298 99 aa6.72□□□□□ -1.33
SNF8-201ENST00000290330 CSDC2Q9Y534 153 aaKnown RBP6.72□□□□□ -1.33
SNF8-201ENST00000290330 IGKV3OR2-268A0A0C4DH90 116 aa6.71□□□□□ -1.34
SNF8-201ENST00000290330 GAGE12HA6NDE8 117 aa6.71□□□□□ -1.34
SNF8-201ENST00000290330 KRTAP29-1A8MX34 341 aaPredicted RBP6.71□□□□□ -1.34
SNF8-201ENST00000290330 PANO1I0J062 215 aa6.71□□□□□ -1.34
SNF8-201ENST00000290330 SLPIP03973 132 aa6.71□□□□□ -1.34
SNF8-201ENST00000290330 FGF6P10767 208 aa6.71□□□□□ -1.34
SNF8-201ENST00000290330 SEC11AP67812 179 aa6.71□□□□□ -1.34
SNF8-201ENST00000290330 AMMECR1LQ6DCA0 310 aa6.71□□□□□ -1.34
SNF8-201ENST00000290330 TMEM101Q96IK0 257 aa6.71□□□□□ -1.34
SNF8-201ENST00000290330 AMELXQ99217 191 aa6.71□□□□□ -1.34
SNF8-201ENST00000290330 UBE2D4Q9Y2X8 147 aa6.71□□□□□ -1.34
SNF8-201ENST00000290330 IGLV4-69A0A075B6H9 119 aa6.7□□□□□ -1.34
SNF8-201ENST00000290330 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.7□□□□□ -1.34
SNF8-201ENST00000290330 ZNF25P17030 456 aaPredicted RBP6.7□□□□□ -1.34
SNF8-201ENST00000290330 HSD52Q0P140 79 aa6.7□□□□□ -1.34
SNF8-201ENST00000290330 VPS13BQ7Z7G8 4022 aa6.69□□□□□ -1.34
SNF8-201ENST00000290330 CIRBPQ14011 172 aaKnown RBP6.69□□□□□ -1.34
SNF8-201ENST00000290330 BATFQ16520 125 aa6.69□□□□□ -1.34
SNF8-201ENST00000290330 TAL2Q16559 108 aa6.69□□□□□ -1.34
SNF8-201ENST00000290330 TMEM170BQ5T4T1 132 aa6.69□□□□□ -1.34
SNF8-201ENST00000290330 CFAP161Q6P656 301 aa6.69□□□□□ -1.34
SNF8-201ENST00000290330 C15orf56Q8N910 161 aa6.69□□□□□ -1.34
SNF8-201ENST00000290330 CHCHD10Q8WYQ3 142 aaPredicted RBP6.69□□□□□ -1.34
SNF8-201ENST00000290330 IGHV3-64A0A075B6Q5 118 aa6.68□□□□□ -1.34
SNF8-201ENST00000290330 MYMXA0A1B0GTQ4 84 aa6.68□□□□□ -1.34
SNF8-201ENST00000290330 TINCRA0A1B0GVN0 87 aa6.68□□□□□ -1.34
SNF8-201ENST00000290330 A6NDN8 102 aa6.68□□□□□ -1.34
SNF8-201ENST00000290330 HINT1P49773 126 aaPredicted RBP6.68□□□□□ -1.34
SNF8-201ENST00000290330 RPL37AP61513 92 aaKnown RBP6.68□□□□□ -1.34
SNF8-201ENST00000290330 C2orf91Q6ZV80 131 aa6.68□□□□□ -1.34
SNF8-201ENST00000290330 OR5A1Q8NGJ0 315 aa6.68□□□□□ -1.34
SNF8-201ENST00000290330 PLEKHB2Q96CS7 222 aa6.68□□□□□ -1.34
SNF8-201ENST00000290330 IGKV2D-26A0A0A0MRZ7 120 aa6.67□□□□□ -1.34
SNF8-201ENST00000290330 H3BRM9 83 aa6.67□□□□□ -1.34
SNF8-201ENST00000290330 HIGD2BQ4VC39 106 aa6.67□□□□□ -1.34
SNF8-201ENST00000290330 PCP2Q8IVA1 136 aa6.67□□□□□ -1.34
SNF8-201ENST00000290330 GEMIN7Q9H840 131 aaKnown RBP6.67□□□□□ -1.34
SNF8-201ENST00000290330 LINC00959A0A1B0GUT2 108 aa6.66□□□□□ -1.34
SNF8-201ENST00000290330 LEPROTO15243 131 aa6.66□□□□□ -1.34
SNF8-201ENST00000290330 CHTF8P0CG12 524 aa6.66□□□□□ -1.34
SNF8-201ENST00000290330 LGALS3P17931 250 aaKnown RBP6.66□□□□□ -1.34
SNF8-201ENST00000290330 HERVK_113P63121 156 aa6.66□□□□□ -1.34
SNF8-201ENST00000290330 FOXI1Q12951 378 aa6.66□□□□□ -1.34
SNF8-201ENST00000290330 BVES-AS1Q5T3Y7 98 aa6.66□□□□□ -1.34
SNF8-201ENST00000290330 Q6ZUT4 128 aa6.66□□□□□ -1.34
SNF8-201ENST00000290330 FAM19A3Q7Z5A8 133 aa6.66□□□□□ -1.34
SNF8-201ENST00000290330 DPH3Q96FX2 82 aa6.66□□□□□ -1.34
SNF8-201ENST00000290330 KRTAP4-8Q9BYQ9 185 aa6.66□□□□□ -1.34
SNF8-201ENST00000290330 A0A087WYN8 130 aa6.65□□□□□ -1.34
SNF8-201ENST00000290330 GVQW2A0A096LPI5 108 aaPredicted RBP6.65□□□□□ -1.34
SNF8-201ENST00000290330 A0A0J9YXV3 536 aa6.65□□□□□ -1.34
SNF8-201ENST00000290330 TMEM223A0PJW6 202 aa6.65□□□□□ -1.34
SNF8-201ENST00000290330 ZNF815PA8K554 130 aa6.65□□□□□ -1.34
SNF8-201ENST00000290330 OXTP01178 125 aa6.65□□□□□ -1.34
SNF8-201ENST00000290330 ZNF22P17026 224 aaPredicted RBP6.65□□□□□ -1.34
SNF8-201ENST00000290330 XCL1P47992 114 aa6.65□□□□□ -1.34
SNF8-201ENST00000290330 SPACA4Q8TDM5 124 aa6.65□□□□□ -1.34
SNF8-201ENST00000290330 ORAOV1Q8WV07 137 aa6.65□□□□□ -1.34
SNF8-201ENST00000290330 OPRPNQ99935 248 aaPredicted RBP6.65□□□□□ -1.34
SNF8-201ENST00000290330 CDC42SE2Q9NRR3 84 aa6.65□□□□□ -1.34
SNF8-201ENST00000290330 J3QQQ9 107 aa6.64□□□□□ -1.35
SNF8-201ENST00000290330 CCL25O15444 150 aa6.64□□□□□ -1.35
SNF8-201ENST00000290330 UBE2D1P51668 147 aa6.64□□□□□ -1.35
SNF8-201ENST00000290330 COX6A2Q02221 97 aa6.64□□□□□ -1.35
SNF8-201ENST00000290330 SCGB1D4Q6XE38 83 aa6.64□□□□□ -1.35
SNF8-201ENST00000290330 IGLV5-45A0A087WSX0 123 aa6.63□□□□□ -1.35
SNF8-201ENST00000290330 TMEM238LA0A1B0GVL6 79 aa6.63□□□□□ -1.35
SNF8-201ENST00000290330 A6NJY4 79 aa6.63□□□□□ -1.35
SNF8-201ENST00000290330 SS18Q15532 418 aa6.63□□□□□ -1.35
SNF8-201ENST00000290330 PLAC8Q9NZF1 115 aa6.63□□□□□ -1.35
SNF8-201ENST00000290330 LRP1Q07954 4544 aaKnown RBP6.62□□□□□ -1.35
SNF8-201ENST00000290330 IGHV1-58A0A0C4DH39 117 aa6.62□□□□□ -1.35
SNF8-201ENST00000290330 A0A1B0GV90 55 aa6.62□□□□□ -1.35
SNF8-201ENST00000290330 CD164L2Q6UWJ8 174 aa6.62□□□□□ -1.35
SNF8-201ENST00000290330 LINC00469Q8N7U9 141 aa6.62□□□□□ -1.35
SNF8-201ENST00000290330 FAM104AQ969W3 186 aa6.62□□□□□ -1.35
SNF8-201ENST00000290330 HIST1H4GQ99525 98 aa6.62□□□□□ -1.35
SNF8-201ENST00000290330 IGKV2-24A0A0C4DH68 120 aa6.61□□□□□ -1.35
SNF8-201ENST00000290330 PTTG1IPP53801 180 aa6.61□□□□□ -1.35
SNF8-201ENST00000290330 CEND1Q8N111 149 aa6.61□□□□□ -1.35
SNF8-201ENST00000290330 LINC00526Q96FQ7 95 aa6.61□□□□□ -1.35
SNF8-201ENST00000290330 SPANXB1Q9NS25 103 aaPredicted RBP6.61□□□□□ -1.35
SNF8-201ENST00000290330 TP73-AS1Q9UF72 201 aa6.61□□□□□ -1.35
SNF8-201ENST00000290330 RNASE13Q5GAN3 156 aaKnown RBP6.6□□□□□ -1.35
SNF8-201ENST00000290330 TTTY13Q9BZ97 58 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms