RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 TRBV20-1A0A075B6N2 111 aa7.95□□□□□ -1.14
SSRP1-201ENST00000278412 ZNF815PA8K554 130 aa7.95□□□□□ -1.14
SSRP1-201ENST00000278412 PPDPFQ9H3Y8 114 aa7.95□□□□□ -1.14
SSRP1-201ENST00000278412 ZNF625Q96I27 306 aaPredicted RBP7.94□□□□□ -1.14
SSRP1-201ENST00000278412 TMEM126AQ9H061 195 aa7.94□□□□□ -1.14
SSRP1-201ENST00000278412 J3QQQ9 107 aa7.94□□□□□ -1.14
SSRP1-201ENST00000278412 M0QXV9 152 aa7.94□□□□□ -1.14
SSRP1-201ENST00000278412 SNCGO76070 127 aa7.94□□□□□ -1.14
SSRP1-201ENST00000278412 PSMB2P49721 201 aa7.94□□□□□ -1.14
SSRP1-201ENST00000278412 LYRM7Q5U5X0 104 aa7.94□□□□□ -1.14
SSRP1-201ENST00000278412 LINC00588Q9Y4M8 146 aa7.94□□□□□ -1.14
SSRP1-201ENST00000278412 KMT2AQ03164 3969 aa7.94□□□□□ -1.14
SSRP1-201ENST00000278412 SMIM1B2RUZ4 78 aa7.93□□□□□ -1.14
SSRP1-201ENST00000278412 C5orf47Q569G3 176 aa7.93□□□□□ -1.14
SSRP1-201ENST00000278412 MYMXA0A1B0GTQ4 84 aa7.93□□□□□ -1.14
SSRP1-201ENST00000278412 A0A1B0GUV1 79 aa7.93□□□□□ -1.14
SSRP1-201ENST00000278412 H7C423 109 aa7.93□□□□□ -1.14
SSRP1-201ENST00000278412 REG3AQ06141 175 aa7.93□□□□□ -1.14
SSRP1-201ENST00000278412 ENHOQ6UWT2 76 aa7.93□□□□□ -1.14
SSRP1-201ENST00000278412 C10orf126Q8N4M7 172 aa7.93□□□□□ -1.14
SSRP1-201ENST00000278412 LINC00526Q96FQ7 95 aa7.93□□□□□ -1.14
SSRP1-201ENST00000278412 IGLV5-45A0A087WSX0 123 aa7.92□□□□□ -1.14
SSRP1-201ENST00000278412 IGHV3OR16-9A0A0B4J2B5 98 aa7.92□□□□□ -1.14
SSRP1-201ENST00000278412 A0A0U1RRA0 63 aa7.92□□□□□ -1.14
SSRP1-201ENST00000278412 KRTAP21-3Q3LHN1 58 aa7.92□□□□□ -1.14
SSRP1-201ENST00000278412 ANKRD29Q8N6D5 301 aa7.92□□□□□ -1.14
SSRP1-201ENST00000278412 H3BNG1 76 aa7.92□□□□□ -1.14
SSRP1-201ENST00000278412 UBE2WQ96B02 151 aa7.92□□□□□ -1.14
SSRP1-201ENST00000278412 TIRAPP58753 221 aa7.91□□□□□ -1.14
SSRP1-201ENST00000278412 MEIG1Q5JSS6 88 aa7.91□□□□□ -1.14
SSRP1-201ENST00000278412 DAND5Q8N907 189 aa7.91□□□□□ -1.14
SSRP1-201ENST00000278412 IGHV1-58A0A0C4DH39 117 aa7.91□□□□□ -1.14
SSRP1-201ENST00000278412 EIF4EBP3O60516 100 aaPredicted RBP7.91□□□□□ -1.14
SSRP1-201ENST00000278412 CHCHD10Q8WYQ3 142 aaPredicted RBP7.91□□□□□ -1.14
SSRP1-201ENST00000278412 TOMM7Q9P0U1 55 aa7.91□□□□□ -1.14
SSRP1-201ENST00000278412 LEPROTO15243 131 aa7.9□□□□□ -1.14
SSRP1-201ENST00000278412 HERVK_113P63121 156 aa7.9□□□□□ -1.14
SSRP1-201ENST00000278412 LOC107984156A0A0G2JMH3 177 aa7.9□□□□□ -1.15
SSRP1-201ENST00000278412 LGALS3P17931 250 aaKnown RBP7.9□□□□□ -1.15
SSRP1-201ENST00000278412 HERVK_113P61574 105 aa7.9□□□□□ -1.15
SSRP1-201ENST00000278412 ARL17AQ8IVW1 177 aa7.9□□□□□ -1.15
SSRP1-201ENST00000278412 TCL1BO95988 128 aa7.89□□□□□ -1.15
SSRP1-201ENST00000278412 NPC2P61916 151 aa7.89□□□□□ -1.15
SSRP1-201ENST00000278412 SCGB1D4Q6XE38 83 aa7.89□□□□□ -1.15
SSRP1-201ENST00000278412 Q9HAA7 133 aa7.89□□□□□ -1.15
SSRP1-201ENST00000278412 ADAMTSL4-AS1Q5T5F5 129 aa7.88□□□□□ -1.15
SSRP1-201ENST00000278412 FAM19A3Q7Z5A8 133 aa7.88□□□□□ -1.15
SSRP1-201ENST00000278412 IGLV5-39A0A0G2JS06 123 aa7.88□□□□□ -1.15
SSRP1-201ENST00000278412 C2orf82Q6UX34 121 aa7.88□□□□□ -1.15
SSRP1-201ENST00000278412 NDUFA12Q9UI09 145 aa7.88□□□□□ -1.15
SSRP1-201ENST00000278412 SCGB1C2P0DMR2 95 aa7.88□□□□□ -1.15
SSRP1-201ENST00000278412 KRTAP1-5Q9BYS1 174 aa7.88□□□□□ -1.15
SSRP1-201ENST00000278412 CASC10Q5T4H9 136 aa7.87□□□□□ -1.15
SSRP1-201ENST00000278412 Q9H8V8 135 aa7.87□□□□□ -1.15
SSRP1-201ENST00000278412 PRR34Q9NV39 138 aa7.87□□□□□ -1.15
SSRP1-201ENST00000278412 A0A0J9YXY3 114 aa7.86□□□□□ -1.15
SSRP1-201ENST00000278412 SS18Q15532 418 aa7.86□□□□□ -1.15
SSRP1-201ENST00000278412 VPS13DQ5THJ4 4388 aa7.86□□□□□ -1.15
SSRP1-201ENST00000278412 C6orf223Q8N319 242 aa7.86□□□□□ -1.15
SSRP1-201ENST00000278412 APLNQ9ULZ1 77 aa7.86□□□□□ -1.15
SSRP1-201ENST00000278412 A0A087WZ39 114 aa7.85□□□□□ -1.15
SSRP1-201ENST00000278412 LINC01600Q96MT4 127 aa7.85□□□□□ -1.15
SSRP1-201ENST00000278412 SLC25A20O43772 301 aa7.85□□□□□ -1.15
SSRP1-201ENST00000278412 LITAFQ99732 161 aa7.85□□□□□ -1.15
SSRP1-201ENST00000278412 SFTA2Q6UW10 78 aa7.84□□□□□ -1.15
SSRP1-201ENST00000278412 C15orf53Q8NAA6 179 aa7.84□□□□□ -1.15
SSRP1-201ENST00000278412 C9orf116Q5BN46 136 aaPredicted RBP7.84□□□□□ -1.16
SSRP1-201ENST00000278412 KRTAP26-1Q6PEX3 210 aa7.84□□□□□ -1.16
SSRP1-201ENST00000278412 CD164L2Q6UWJ8 174 aa7.83□□□□□ -1.16
SSRP1-201ENST00000278412 CRPP02741 224 aa7.83□□□□□ -1.16
SSRP1-201ENST00000278412 RPL13AP40429 203 aaKnown RBP7.83□□□□□ -1.16
SSRP1-201ENST00000278412 CCL18P55774 89 aa7.83□□□□□ -1.16
SSRP1-201ENST00000278412 LINC01556Q5JQF7 62 aa7.83□□□□□ -1.16
SSRP1-201ENST00000278412 COX7B2Q8TF08 81 aa7.83□□□□□ -1.16
SSRP1-201ENST00000278412 HIGD2BQ4VC39 106 aa7.82□□□□□ -1.16
SSRP1-201ENST00000278412 C10orf25Q5T742 122 aa7.82□□□□□ -1.16
SSRP1-201ENST00000278412 TRAV8-4A0A0B4J246 113 aa7.82□□□□□ -1.16
SSRP1-201ENST00000278412 COX7A2LO14548 114 aa7.82□□□□□ -1.16
SSRP1-201ENST00000278412 LECT2O14960 151 aa7.82□□□□□ -1.16
SSRP1-201ENST00000278412 SRSF9Q13242 221 aaKnown RBP eCLIP7.82□□□□□ -1.16
SSRP1-201ENST00000278412 IGKV2D-24A0A075B6R9 120 aa7.81□□□□□ -1.16
SSRP1-201ENST00000278412 DNAH10OSP0CZ25 163 aa7.81□□□□□ -1.16
SSRP1-201ENST00000278412 KLK5Q9Y337 293 aaPredicted RBP7.81□□□□□ -1.16
SSRP1-201ENST00000278412 HYDINQ4G0P3 5121 aa7.81□□□□□ -1.16
SSRP1-201ENST00000278412 DNAH2Q9P225 4427 aa7.81□□□□□ -1.16
SSRP1-201ENST00000278412 C9JAW5 83 aa7.8□□□□□ -1.16
SSRP1-201ENST00000278412 NDUFA1O15239 70 aa7.8□□□□□ -1.16
SSRP1-201ENST00000278412 KIAA0087Q14695 138 aa7.8□□□□□ -1.16
SSRP1-201ENST00000278412 PRSS2P07478 247 aa7.8□□□□□ -1.16
SSRP1-201ENST00000278412 MALP21145 153 aa7.8□□□□□ -1.16
SSRP1-201ENST00000278412 NTN5Q8WTR8 489 aaPredicted RBP7.8□□□□□ -1.16
SSRP1-201ENST00000278412 TRBV7-7A0A0K0K1E9 115 aa7.79□□□□□ -1.16
SSRP1-201ENST00000278412 A0A1B0GX51 115 aa7.79□□□□□ -1.16
SSRP1-201ENST00000278412 CFC1BP0CG36 223 aa7.79□□□□□ -1.16
SSRP1-201ENST00000278412 CFC1P0CG37 223 aa7.79□□□□□ -1.16
SSRP1-201ENST00000278412 PFN2P35080 140 aa7.79□□□□□ -1.16
SSRP1-201ENST00000278412 SOSTDC1Q6X4U4 206 aa7.79□□□□□ -1.16
SSRP1-201ENST00000278412 MUSTN1Q8IVN3 82 aa7.79□□□□□ -1.16
SSRP1-201ENST00000278412 C6orf226Q5I0X4 101 aa7.79□□□□□ -1.16
SSRP1-201ENST00000278412 UNQ6190/PRO20217Q6UXQ8 127 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms