RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 Q6ZSN1 163 aa8.22□□□□□ -1.09
USP53-201ENST00000274030 NTM-AS1Q6ZSK4 140 aa8.22□□□□□ -1.09
USP53-201ENST00000274030 NDUFC2-KCTD14E9PQ53 114 aa8.22□□□□□ -1.09
USP53-201ENST00000274030 FHL2Q14192 279 aa8.22□□□□□ -1.09
USP53-201ENST00000274030 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.22□□□□□ -1.09
USP53-201ENST00000274030 ADAMTSL4-AS1Q5T5F5 129 aa8.21□□□□□ -1.09
USP53-201ENST00000274030 Q8N9L7 120 aa8.21□□□□□ -1.1
USP53-201ENST00000274030 FASNP49327 2511 aaKnown RBP8.21□□□□□ -1.1
USP53-201ENST00000274030 TET2Q6N021 2002 aaPredicted RBP8.2□□□□□ -1.1
USP53-201ENST00000274030 PTPRSQ13332 1948 aa8.2□□□□□ -1.1
USP53-201ENST00000274030 AGRNO00468 2067 aa8.2□□□□□ -1.1
USP53-201ENST00000274030 A0A087WYN8 130 aa8.2□□□□□ -1.1
USP53-201ENST00000274030 FAM240AA0A1B0GVK7 77 aa8.2□□□□□ -1.1
USP53-201ENST00000274030 CIRBP-AS1Q8TBR5 109 aa8.2□□□□□ -1.1
USP53-201ENST00000274030 LRP4O75096 1905 aa8.2□□□□□ -1.1
USP53-201ENST00000274030 A0A087WVE0 104 aa8.19□□□□□ -1.1
USP53-201ENST00000274030 EGFEM1PQ0D2K5 195 aa8.19□□□□□ -1.1
USP53-201ENST00000274030 POLQO75417 2590 aa8.19□□□□□ -1.1
USP53-201ENST00000274030 C10orf25Q5T742 122 aa8.19□□□□□ -1.1
USP53-201ENST00000274030 Q8N814 137 aa8.18□□□□□ -1.1
USP53-201ENST00000274030 F8P00451 2351 aa8.18□□□□□ -1.1
USP53-201ENST00000274030 K7ERS5 55 aa8.18□□□□□ -1.1
USP53-201ENST00000274030 LINC00474Q9P2X8 69 aa8.18□□□□□ -1.1
USP53-201ENST00000274030 C1orf137Q5JT78 98 aa8.18□□□□□ -1.1
USP53-201ENST00000274030 A8MTW9 85 aa8.17□□□□□ -1.1
USP53-201ENST00000274030 IMUPQ9GZP8 106 aa8.17□□□□□ -1.1
USP53-201ENST00000274030 A6NED7 52 aa8.17□□□□□ -1.1
USP53-201ENST00000274030 COX7CP15954 63 aa8.17□□□□□ -1.1
USP53-201ENST00000274030 Q6Q795 121 aa8.17□□□□□ -1.1
USP53-201ENST00000274030 RETNLBQ9BQ08 111 aa8.16□□□□□ -1.1
USP53-201ENST00000274030 A0A096LNJ9 63 aa8.16□□□□□ -1.1
USP53-201ENST00000274030 REG3GQ6UW15 175 aa8.16□□□□□ -1.1
USP53-201ENST00000274030 DEFB116Q30KQ4 102 aa8.15□□□□□ -1.1
USP53-201ENST00000274030 ESRGQ1W209 222 aa8.15□□□□□ -1.1
USP53-201ENST00000274030 RPL28P46779 137 aaKnown RBP8.14□□□□□ -1.11
USP53-201ENST00000274030 IGLV5-52A0A0A0MRZ9 124 aa8.14□□□□□ -1.11
USP53-201ENST00000274030 NDUFC1O43677 76 aa8.14□□□□□ -1.11
USP53-201ENST00000274030 LINC00208Q96KT6 92 aa8.14□□□□□ -1.11
USP53-201ENST00000274030 AMELXQ99217 191 aa8.14□□□□□ -1.11
USP53-201ENST00000274030 NUPR2A6NF83 97 aa8.14□□□□□ -1.11
USP53-201ENST00000274030 LINC01556Q5JQF7 62 aa8.14□□□□□ -1.11
USP53-201ENST00000274030 Q6JHZ5 121 aa8.14□□□□□ -1.11
USP53-201ENST00000274030 PRR15LQ9BU68 103 aa8.14□□□□□ -1.11
USP53-201ENST00000274030 IGHV6-1A0A0B4J1U7 121 aa8.13□□□□□ -1.11
USP53-201ENST00000274030 SERP1Q9Y6X1 66 aa8.13□□□□□ -1.11
USP53-201ENST00000274030 ACANP16112 2415 aa8.13□□□□□ -1.11
USP53-201ENST00000274030 LYPD5Q6UWN5 251 aa8.12□□□□□ -1.11
USP53-201ENST00000274030 MUC7Q8TAX7 377 aa8.12□□□□□ -1.11
USP53-201ENST00000274030 LINC01547P58512 204 aaPredicted RBP8.12□□□□□ -1.11
USP53-201ENST00000274030 Q6ZVQ6 151 aa8.11□□□□□ -1.11
USP53-201ENST00000274030 BEAN1Q3B7T3 259 aa8.11□□□□□ -1.11
USP53-201ENST00000274030 MRPL55Q7Z7F7 128 aaKnown RBP8.11□□□□□ -1.11
USP53-201ENST00000274030 LINC00575Q6W349 94 aa8.11□□□□□ -1.11
USP53-201ENST00000274030 SOSTDC1Q6X4U4 206 aa8.11□□□□□ -1.11
USP53-201ENST00000274030 C16orf95Q9H693 158 aa8.11□□□□□ -1.11
USP53-201ENST00000274030 A0A087WSZ3 146 aa8.1□□□□□ -1.11
USP53-201ENST00000274030 Q9BRP9 147 aa8.1□□□□□ -1.11
USP53-201ENST00000274030 CSDC2Q9Y534 153 aaKnown RBP8.1□□□□□ -1.11
USP53-201ENST00000274030 V9GYY9 64 aa8.1□□□□□ -1.11
USP53-201ENST00000274030 Q6ZRU5 148 aa8.09□□□□□ -1.11
USP53-201ENST00000274030 UTRNP46939 3433 aa8.09□□□□□ -1.11
USP53-201ENST00000274030 PCOTHQ58A44 107 aa8.09□□□□□ -1.11
USP53-201ENST00000274030 COX8CQ7Z4L0 72 aa8.09□□□□□ -1.11
USP53-201ENST00000274030 ATP5EP56381 51 aaPredicted RBP8.09□□□□□ -1.11
USP53-201ENST00000274030 PRLHP81277 87 aa8.09□□□□□ -1.11
USP53-201ENST00000274030 X6R8D5 127 aa8.09□□□□□ -1.11
USP53-201ENST00000274030 CPAMD8Q8IZJ3 1885 aa8.08□□□□□ -1.12
USP53-201ENST00000274030 Q8N3U1 123 aa8.08□□□□□ -1.12
USP53-201ENST00000274030 A0A1B0GUV1 79 aa8.07□□□□□ -1.12
USP53-201ENST00000274030 TRAV7A0A075B6U4 112 aa8.06□□□□□ -1.12
USP53-201ENST00000274030 SPINK1P00995 79 aa8.06□□□□□ -1.12
USP53-201ENST00000274030 LINC00337Q8N6G1 96 aa8.06□□□□□ -1.12
USP53-201ENST00000274030 TRBV7-6A0A0J9YX20 115 aa8.05□□□□□ -1.12
USP53-201ENST00000274030 C1orf134Q5TEV5 83 aa8.05□□□□□ -1.12
USP53-201ENST00000274030 SBSPONQ8IVN8 264 aa8.04□□□□□ -1.12
USP53-201ENST00000274030 KIF25-AS1Q9Y6Z4 181 aa8.04□□□□□ -1.12
USP53-201ENST00000274030 LINC00846Q9NV44 126 aa8.03□□□□□ -1.12
USP53-201ENST00000274030 C11orf72Q8NBR9 251 aa8.02□□□□□ -1.12
USP53-201ENST00000274030 C2orf48Q96LS8 159 aa8.02□□□□□ -1.13
USP53-201ENST00000274030 FHL3Q13643 280 aa8.02□□□□□ -1.13
USP53-201ENST00000274030 ADAMTS20P59510 1910 aa8.02□□□□□ -1.13
USP53-201ENST00000274030 PRYO14603 147 aa8.01□□□□□ -1.13
USP53-201ENST00000274030 C22orf24Q9Y442 160 aa8.01□□□□□ -1.13
USP53-201ENST00000274030 Q9UF83 564 aa8.01□□□□□ -1.13
USP53-201ENST00000274030 SMIM26A0A096LP01 95 aa8.01□□□□□ -1.13
USP53-201ENST00000274030 PSPHP1O15172 72 aa7.99□□□□□ -1.13
USP53-201ENST00000274030 SMCR5Q8TEV8 140 aa7.99□□□□□ -1.13
USP53-201ENST00000274030 PRRC2CQ9Y520 2896 aaKnown RBP7.99□□□□□ -1.13
USP53-201ENST00000274030 ANKRD17O75179 2603 aaKnown RBP7.99□□□□□ -1.13
USP53-201ENST00000274030 TRBV7-7A0A0K0K1E9 115 aa7.99□□□□□ -1.13
USP53-201ENST00000274030 H0Y9P7 68 aa7.99□□□□□ -1.13
USP53-201ENST00000274030 Q8N2B8 174 aa7.98□□□□□ -1.13
USP53-201ENST00000274030 IGHV3OR16-9A0A0B4J2B5 98 aa7.97□□□□□ -1.13
USP53-201ENST00000274030 HCG22E2RYF7 251 aa7.97□□□□□ -1.13
USP53-201ENST00000274030 LINC00315P59091 139 aa7.97□□□□□ -1.13
USP53-201ENST00000274030 KIAA0087Q14695 138 aa7.96□□□□□ -1.13
USP53-201ENST00000274030 EPG5Q9HCE0 2579 aa7.96□□□□□ -1.13
USP53-201ENST00000274030 COL5A1P20908 1838 aaPredicted RBP7.96□□□□□ -1.14
USP53-201ENST00000274030 MDFIQ99750 246 aa7.96□□□□□ -1.14
USP53-201ENST00000274030 IGLV5-39A0A0G2JS06 123 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms