RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 BBC3Q96PG8 261 aaPredicted RBP5.83□□□□□ -1.48
LIMD1-201ENST00000273317 IGIPA6NJ69 53 aa5.83□□□□□ -1.48
LIMD1-201ENST00000273317 UTRNP46939 3433 aa5.83□□□□□ -1.48
LIMD1-201ENST00000273317 SPINK1P00995 79 aa5.83□□□□□ -1.48
LIMD1-201ENST00000273317 CRYGAP11844 174 aa5.83□□□□□ -1.48
LIMD1-201ENST00000273317 RPL28P46779 137 aaKnown RBP5.83□□□□□ -1.48
LIMD1-201ENST00000273317 CDC42SE2Q9NRR3 84 aa5.83□□□□□ -1.48
LIMD1-201ENST00000273317 PRYO14603 147 aa5.83□□□□□ -1.48
LIMD1-201ENST00000273317 EP400Q96L91 3159 aa5.82□□□□□ -1.48
LIMD1-201ENST00000273317 Q9UF83 564 aa5.82□□□□□ -1.48
LIMD1-201ENST00000273317 CSDC2Q9Y534 153 aaKnown RBP5.82□□□□□ -1.48
LIMD1-201ENST00000273317 LINC01561Q8N1V8 128 aa5.81□□□□□ -1.48
LIMD1-201ENST00000273317 REG3GQ6UW15 175 aa5.81□□□□□ -1.48
LIMD1-201ENST00000273317 PROK1P58294 105 aa5.81□□□□□ -1.48
LIMD1-201ENST00000273317 PCNTO95613 3336 aa5.81□□□□□ -1.48
LIMD1-201ENST00000273317 Q6ZS46 218 aa5.81□□□□□ -1.48
LIMD1-201ENST00000273317 C11orf21Q9P2W6 132 aa5.81□□□□□ -1.48
LIMD1-201ENST00000273317 C1orf137Q5JT78 98 aa5.8□□□□□ -1.48
LIMD1-201ENST00000273317 ZNF580Q9UK33 172 aa5.8□□□□□ -1.48
LIMD1-201ENST00000273317 AKAP13Q12802 2813 aa5.8□□□□□ -1.48
LIMD1-201ENST00000273317 ESRGQ1W209 222 aa5.8□□□□□ -1.48
LIMD1-201ENST00000273317 CR1P17927 2039 aa5.8□□□□□ -1.48
LIMD1-201ENST00000273317 A8MZ25 164 aa5.8□□□□□ -1.48
LIMD1-201ENST00000273317 CYSRT1A8MQ03 144 aa5.79□□□□□ -1.48
LIMD1-201ENST00000273317 COX8CQ7Z4L0 72 aa5.79□□□□□ -1.48
LIMD1-201ENST00000273317 CRIP2P52943 208 aaPredicted RBP5.79□□□□□ -1.48
LIMD1-201ENST00000273317 Q6ZVQ6 151 aa5.79□□□□□ -1.48
LIMD1-201ENST00000273317 LINC00242Q5T6M2 205 aa5.79□□□□□ -1.48
LIMD1-201ENST00000273317 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.79□□□□□ -1.48
LIMD1-201ENST00000273317 IGLV9-49A0A0B4J1Y8 123 aa5.79□□□□□ -1.48
LIMD1-201ENST00000273317 BRI3O95415 125 aa5.79□□□□□ -1.48
LIMD1-201ENST00000273317 CXCL6P80162 114 aa5.79□□□□□ -1.48
LIMD1-201ENST00000273317 AMELXQ99217 191 aa5.79□□□□□ -1.48
LIMD1-201ENST00000273317 NUPR2A6NF83 97 aa5.78□□□□□ -1.48
LIMD1-201ENST00000273317 RPL37AP8A6NKH3 93 aa5.78□□□□□ -1.48
LIMD1-201ENST00000273317 SMIM1B2RUZ4 78 aa5.78□□□□□ -1.48
LIMD1-201ENST00000273317 MAST4O15021 2626 aa5.78□□□□□ -1.48
LIMD1-201ENST00000273317 PCOTHQ58A44 107 aa5.78□□□□□ -1.48
LIMD1-201ENST00000273317 TRBV7-6A0A0J9YX20 115 aa5.78□□□□□ -1.48
LIMD1-201ENST00000273317 C2orf48Q96LS8 159 aa5.78□□□□□ -1.48
LIMD1-201ENST00000273317 TRBV10-3A0A0K0K1G6 114 aa5.77□□□□□ -1.49
LIMD1-201ENST00000273317 LOC100131303A0A0U1RQF7 123 aa5.77□□□□□ -1.49
LIMD1-201ENST00000273317 C19orf84I3L1E1 186 aa5.77□□□□□ -1.49
LIMD1-201ENST00000273317 LINC00310P59036 64 aa5.77□□□□□ -1.49
LIMD1-201ENST00000273317 LINC00482Q8N8I6 264 aa5.76□□□□□ -1.49
LIMD1-201ENST00000273317 A0A087WYN8 130 aa5.76□□□□□ -1.49
LIMD1-201ENST00000273317 TRBV7-7A0A0K0K1E9 115 aa5.76□□□□□ -1.49
LIMD1-201ENST00000273317 A0A1B0GUV1 79 aa5.76□□□□□ -1.49
LIMD1-201ENST00000273317 LINC01546A6NGU7 62 aa5.75□□□□□ -1.49
LIMD1-201ENST00000273317 HECTD1Q9ULT8 2610 aa5.75□□□□□ -1.49
LIMD1-201ENST00000273317 ZNF843Q8N446 348 aa5.75□□□□□ -1.49
LIMD1-201ENST00000273317 HCG22E2RYF7 251 aa5.75□□□□□ -1.49
LIMD1-201ENST00000273317 INAFM1C9JVW0 142 aa5.75□□□□□ -1.49
LIMD1-201ENST00000273317 hDV103S1A0JD37 113 aa5.75□□□□□ -1.49
LIMD1-201ENST00000273317 LINC00208Q96KT6 92 aa5.74□□□□□ -1.49
LIMD1-201ENST00000273317 C10orf99Q6UWK7 81 aa5.74□□□□□ -1.49
LIMD1-201ENST00000273317 LINC01006Q8NI28 216 aa5.74□□□□□ -1.49
LIMD1-201ENST00000273317 GAS8-AS1O95177 125 aa5.74□□□□□ -1.49
LIMD1-201ENST00000273317 LIMD2Q9BT23 127 aa5.74□□□□□ -1.49
LIMD1-201ENST00000273317 TMEM254Q8TBM7 123 aa5.74□□□□□ -1.49
LIMD1-201ENST00000273317 H0Y9P7 68 aa5.74□□□□□ -1.49
LIMD1-201ENST00000273317 Q8N3U1 123 aa5.74□□□□□ -1.49
LIMD1-201ENST00000273317 Q9BRP9 147 aa5.73□□□□□ -1.49
LIMD1-201ENST00000273317 LY6G6DO95868 133 aa5.73□□□□□ -1.49
LIMD1-201ENST00000273317 TSPEAR-AS2P59090 65 aa5.73□□□□□ -1.49
LIMD1-201ENST00000273317 IGHV6-1A0A0B4J1U7 121 aa5.73□□□□□ -1.49
LIMD1-201ENST00000273317 UNQ6190/PRO20217Q6UXQ8 127 aa5.73□□□□□ -1.49
LIMD1-201ENST00000273317 M0R2N4 97 aa5.73□□□□□ -1.49
LIMD1-201ENST00000273317 BAHCC1Q9P281 2608 aa5.73□□□□□ -1.49
LIMD1-201ENST00000273317 A0A087WVE0 104 aa5.73□□□□□ -1.49
LIMD1-201ENST00000273317 A0A1B0GW54 56 aa5.73□□□□□ -1.49
LIMD1-201ENST00000273317 DEFB116Q30KQ4 102 aa5.73□□□□□ -1.49
LIMD1-201ENST00000273317 WISP2O76076 250 aa5.72□□□□□ -1.49
LIMD1-201ENST00000273317 PRM2P04554 102 aa5.72□□□□□ -1.49
LIMD1-201ENST00000273317 ATRQ13535 2644 aa5.72□□□□□ -1.49
LIMD1-201ENST00000273317 ADAMTSL4-AS1Q5T5F5 129 aa5.72□□□□□ -1.49
LIMD1-201ENST00000273317 C4orf26Q17RF5 130 aa5.72□□□□□ -1.49
LIMD1-201ENST00000273317 IGLV8-61A0A075B6I0 122 aa5.72□□□□□ -1.49
LIMD1-201ENST00000273317 BCE1O60756 84 aa5.72□□□□□ -1.49
LIMD1-201ENST00000273317 LINC01547P58512 204 aaPredicted RBP5.71□□□□□ -1.49
LIMD1-201ENST00000273317 COX6A2Q02221 97 aa5.71□□□□□ -1.49
LIMD1-201ENST00000273317 LINC00575Q6W349 94 aa5.71□□□□□ -1.5
LIMD1-201ENST00000273317 TP53AIP1Q9HCN2 124 aa5.71□□□□□ -1.5
LIMD1-201ENST00000273317 Q8N2B8 174 aa5.7□□□□□ -1.5
LIMD1-201ENST00000273317 URB1-AS1Q96HZ7 61 aa5.7□□□□□ -1.5
LIMD1-201ENST00000273317 C9orf116Q5BN46 136 aaPredicted RBP5.7□□□□□ -1.5
LIMD1-201ENST00000273317 IGLV2-18A0A075B6J9 118 aa5.7□□□□□ -1.5
LIMD1-201ENST00000273317 IGLV1-51P01701 117 aa5.7□□□□□ -1.5
LIMD1-201ENST00000273317 ODF3L2Q3SX64 289 aa5.7□□□□□ -1.5
LIMD1-201ENST00000273317 NBEAL1Q6ZS30 2694 aa5.7□□□□□ -1.5
LIMD1-201ENST00000273317 FHL2Q14192 279 aa5.7□□□□□ -1.5
LIMD1-201ENST00000273317 CIRBP-AS1Q8TBR5 109 aa5.7□□□□□ -1.5
LIMD1-201ENST00000273317 C18orf65Q6ZTR6 163 aa5.7□□□□□ -1.5
LIMD1-201ENST00000273317 IGLV5-52A0A0A0MRZ9 124 aa5.69□□□□□ -1.5
LIMD1-201ENST00000273317 PRO0628Q9UI54 55 aa5.69□□□□□ -1.5
LIMD1-201ENST00000273317 PRLHP81277 87 aa5.69□□□□□ -1.5
LIMD1-201ENST00000273317 SPINT4Q6UDR6 99 aa5.69□□□□□ -1.5
LIMD1-201ENST00000273317 C16orf95Q9H693 158 aa5.69□□□□□ -1.5
LIMD1-201ENST00000273317 SBSPONQ8IVN8 264 aa5.69□□□□□ -1.5
LIMD1-201ENST00000273317 IGLV5-39A0A0G2JS06 123 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms