RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 IGLV5-45A0A087WSX0 123 aa11.36□□□□□ -0.59
MAP1LC3B-201ENST00000268607 C9orf129Q5T035 196 aaKnown RBP11.36□□□□□ -0.59
MAP1LC3B-201ENST00000268607 DGAT2L7PQ6IED9 249 aa11.36□□□□□ -0.59
MAP1LC3B-201ENST00000268607 NOTCH1P46531 2555 aa11.35□□□□□ -0.59
MAP1LC3B-201ENST00000268607 DNAL4O96015 105 aa11.35□□□□□ -0.59
MAP1LC3B-201ENST00000268607 MALP21145 153 aa11.35□□□□□ -0.59
MAP1LC3B-201ENST00000268607 ODF3L2Q3SX64 289 aa11.35□□□□□ -0.59
MAP1LC3B-201ENST00000268607 LINC01561Q8N1V8 128 aa11.35□□□□□ -0.59
MAP1LC3B-201ENST00000268607 PIK3CD-AS1Q5SR53 167 aa11.34□□□□□ -0.59
MAP1LC3B-201ENST00000268607 FAM222AQ5U5X8 452 aa11.34□□□□□ -0.59
MAP1LC3B-201ENST00000268607 PRIMA1Q86XR5 153 aa11.34□□□□□ -0.59
MAP1LC3B-201ENST00000268607 C14orf132Q9NPU4 83 aa11.34□□□□□ -0.59
MAP1LC3B-201ENST00000268607 LINC00846Q9NV44 126 aa11.34□□□□□ -0.59
MAP1LC3B-201ENST00000268607 USP17L23D6RBM5 183 aa11.33□□□□□ -0.59
MAP1LC3B-201ENST00000268607 LINC00242Q5T6M2 205 aa11.33□□□□□ -0.59
MAP1LC3B-201ENST00000268607 IGLV5-39A0A0G2JS06 123 aa11.33□□□□□ -0.6
MAP1LC3B-201ENST00000268607 SMIM1B2RUZ4 78 aa11.32□□□□□ -0.6
MAP1LC3B-201ENST00000268607 FHL2Q14192 279 aa11.32□□□□□ -0.6
MAP1LC3B-201ENST00000268607 WFDC10AQ9H1F0 79 aa11.31□□□□□ -0.6
MAP1LC3B-201ENST00000268607 A8MTW9 85 aa11.31□□□□□ -0.6
MAP1LC3B-201ENST00000268607 STHQ8IWL8 128 aa11.3□□□□□ -0.6
MAP1LC3B-201ENST00000268607 COPS9Q8WXC6 57 aa11.3□□□□□ -0.6
MAP1LC3B-201ENST00000268607 Q6JHZ5 121 aa11.29□□□□□ -0.6
MAP1LC3B-201ENST00000268607 ZNF415Q09FC8 603 aa11.29□□□□□ -0.6
MAP1LC3B-201ENST00000268607 MRAPQ8TCY5 172 aa11.29□□□□□ -0.6
MAP1LC3B-201ENST00000268607 INSP01308 110 aa11.28□□□□□ -0.6
MAP1LC3B-201ENST00000268607 IGHV3-53P01767 116 aa11.28□□□□□ -0.6
MAP1LC3B-201ENST00000268607 C11orf72Q8NBR9 251 aa11.28□□□□□ -0.6
MAP1LC3B-201ENST00000268607 PF4P02776 101 aa11.27□□□□□ -0.6
MAP1LC3B-201ENST00000268607 C1orf158Q8N1D5 194 aa11.26□□□□□ -0.61
MAP1LC3B-201ENST00000268607 A0A087WYN8 130 aa11.25□□□□□ -0.61
MAP1LC3B-201ENST00000268607 KRTAP24-1Q3LI83 254 aa11.25□□□□□ -0.61
MAP1LC3B-201ENST00000268607 RPL28P46779 137 aaKnown RBP11.25□□□□□ -0.61
MAP1LC3B-201ENST00000268607 LINC00337Q8N6G1 96 aa11.25□□□□□ -0.61
MAP1LC3B-201ENST00000268607 NBEAL1Q6ZS30 2694 aa11.25□□□□□ -0.61
MAP1LC3B-201ENST00000268607 CRPP02741 224 aa11.24□□□□□ -0.61
MAP1LC3B-201ENST00000268607 RPL35AP18077 110 aaKnown RBP11.24□□□□□ -0.61
MAP1LC3B-201ENST00000268607 TRGV1A0A0A0MS02 117 aa11.23□□□□□ -0.61
MAP1LC3B-201ENST00000268607 PFN2P35080 140 aa11.23□□□□□ -0.61
MAP1LC3B-201ENST00000268607 LINC00336Q6ZUF6 198 aa11.23□□□□□ -0.61
MAP1LC3B-201ENST00000268607 TRAV13-2A0A0B4J235 113 aa11.23□□□□□ -0.61
MAP1LC3B-201ENST00000268607 NCR3O14931 201 aa11.23□□□□□ -0.61
MAP1LC3B-201ENST00000268607 WFDC9Q8NEX5 89 aa11.23□□□□□ -0.61
MAP1LC3B-201ENST00000268607 ANK2Q01484 3957 aa11.23□□□□□ -0.61
MAP1LC3B-201ENST00000268607 IGKV2-28A0A075B6P5 120 aa11.22□□□□□ -0.61
MAP1LC3B-201ENST00000268607 IGKV2D-28P01615 120 aa11.22□□□□□ -0.61
MAP1LC3B-201ENST00000268607 MGAM2Q2M2H8 2515 aa11.21□□□□□ -0.61
MAP1LC3B-201ENST00000268607 MIR7-3HGQ8N6C7 128 aa11.21□□□□□ -0.61
MAP1LC3B-201ENST00000268607 SMIM11BQ8TCY0 68 aa11.21□□□□□ -0.61
MAP1LC3B-201ENST00000268607 TRAV23DV6A0A075B6W5 121 aa11.21□□□□□ -0.62
MAP1LC3B-201ENST00000268607 GHRHP01286 108 aa11.21□□□□□ -0.62
MAP1LC3B-201ENST00000268607 Q6ZTI0 123 aa11.21□□□□□ -0.62
MAP1LC3B-201ENST00000268607 SND1-IT1Q9HBX3 110 aa11.21□□□□□ -0.62
MAP1LC3B-201ENST00000268607 C20orf197Q8N268 126 aa11.2□□□□□ -0.62
MAP1LC3B-201ENST00000268607 TMEM243Q9BU79 118 aa11.2□□□□□ -0.62
MAP1LC3B-201ENST00000268607 FAM19A3Q7Z5A8 133 aa11.2□□□□□ -0.62
MAP1LC3B-201ENST00000268607 NTM-AS1Q6ZSK4 140 aa11.19□□□□□ -0.62
MAP1LC3B-201ENST00000268607 OBSCN-AS1Q96MR7 158 aa11.19□□□□□ -0.62
MAP1LC3B-201ENST00000268607 PRO0628Q9UI54 55 aa11.19□□□□□ -0.62
MAP1LC3B-201ENST00000268607 NDUFC2O95298 119 aa11.18□□□□□ -0.62
MAP1LC3B-201ENST00000268607 GIG44P09565 113 aaPredicted RBP11.18□□□□□ -0.62
MAP1LC3B-201ENST00000268607 LINC00482Q8N8I6 264 aa11.18□□□□□ -0.62
MAP1LC3B-201ENST00000268607 C1orf43Q9BWL3 253 aa11.18□□□□□ -0.62
MAP1LC3B-201ENST00000268607 NOP10Q9NPE3 64 aaKnown RBP11.18□□□□□ -0.62
MAP1LC3B-201ENST00000268607 SLPIP03973 132 aa11.18□□□□□ -0.62
MAP1LC3B-201ENST00000268607 CDC42SE2Q9NRR3 84 aa11.18□□□□□ -0.62
MAP1LC3B-201ENST00000268607 LECT2O14960 151 aa11.17□□□□□ -0.62
MAP1LC3B-201ENST00000268607 TOMM7Q9P0U1 55 aa11.17□□□□□ -0.62
MAP1LC3B-201ENST00000268607 IGLV1-51P01701 117 aa11.16□□□□□ -0.62
MAP1LC3B-201ENST00000268607 FAM19A1Q7Z5A9 133 aa11.16□□□□□ -0.62
MAP1LC3B-201ENST00000268607 FAM236DA0A1B0GTK5 79 aa11.16□□□□□ -0.62
MAP1LC3B-201ENST00000268607 FAM236CP0DP71 79 aa11.16□□□□□ -0.62
MAP1LC3B-201ENST00000268607 OVOL2Q9BRP0 275 aa11.16□□□□□ -0.62
MAP1LC3B-201ENST00000268607 LINC00158P58513 81 aa11.15□□□□□ -0.62
MAP1LC3B-201ENST00000268607 NDUFC2-KCTD14E9PQ53 114 aa11.15□□□□□ -0.62
MAP1LC3B-201ENST00000268607 C19orf73Q9NVV2 129 aa11.15□□□□□ -0.62
MAP1LC3B-201ENST00000268607 COX7B2Q8TF08 81 aa11.14□□□□□ -0.63
MAP1LC3B-201ENST00000268607 PKIGQ9Y2B9 76 aa11.14□□□□□ -0.63
MAP1LC3B-201ENST00000268607 IGKV3OR2-268A0A0C4DH90 116 aa11.13□□□□□ -0.63
MAP1LC3B-201ENST00000268607 XCL1P47992 114 aa11.13□□□□□ -0.63
MAP1LC3B-201ENST00000268607 RPL36AP83881 106 aaKnown RBP11.13□□□□□ -0.63
MAP1LC3B-201ENST00000268607 ENHOQ6UWT2 76 aa11.13□□□□□ -0.63
MAP1LC3B-201ENST00000268607 RPL36ALQ969Q0 106 aaKnown RBP11.13□□□□□ -0.63
MAP1LC3B-201ENST00000268607 H0YGX0 51 aa11.13□□□□□ -0.63
MAP1LC3B-201ENST00000268607 CCL18P55774 89 aa11.13□□□□□ -0.63
MAP1LC3B-201ENST00000268607 OXLD1Q5BKU9 147 aa11.12□□□□□ -0.63
MAP1LC3B-201ENST00000268607 IL17DQ8TAD2 202 aa11.12□□□□□ -0.63
MAP1LC3B-201ENST00000268607 CMYA5Q8N3K9 4069 aa11.11□□□□□ -0.63
MAP1LC3B-201ENST00000268607 K7EQD1 137 aa11.11□□□□□ -0.63
MAP1LC3B-201ENST00000268607 SS18Q15532 418 aa11.11□□□□□ -0.63
MAP1LC3B-201ENST00000268607 TRGV2A0A075B6R0 118 aa11.1□□□□□ -0.63
MAP1LC3B-201ENST00000268607 H7BZZ5 65 aa11.1□□□□□ -0.63
MAP1LC3B-201ENST00000268607 UBE2L6O14933 153 aa11.1□□□□□ -0.63
MAP1LC3B-201ENST00000268607 CCKP06307 115 aa11.1□□□□□ -0.63
MAP1LC3B-201ENST00000268607 LOC100131303A0A0U1RQF7 123 aa11.1□□□□□ -0.63
MAP1LC3B-201ENST00000268607 SERP1Q9Y6X1 66 aa11.1□□□□□ -0.63
MAP1LC3B-201ENST00000268607 PLAC8L1A1L4L8 177 aa11.09□□□□□ -0.63
MAP1LC3B-201ENST00000268607 EPM2AB3EWF7 344 aa11.09□□□□□ -0.63
MAP1LC3B-201ENST00000268607 PAX4O43316 350 aa11.09□□□□□ -0.63
MAP1LC3B-201ENST00000268607 CSNK1G2-AS1Q8NCQ2 148 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms