RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 WFDC10BQ8IUB3 73 aa5.7□□□□□ -1.5
USP3-201ENST00000268049 ANKRD17O75179 2603 aaKnown RBP5.7□□□□□ -1.5
USP3-201ENST00000268049 A8MZ25 164 aa5.7□□□□□ -1.5
USP3-201ENST00000268049 Q6ZPA2 131 aa5.7□□□□□ -1.5
USP3-201ENST00000268049 Q8N6K4 173 aa5.7□□□□□ -1.5
USP3-201ENST00000268049 TRBV7-6A0A0J9YX20 115 aa5.7□□□□□ -1.5
USP3-201ENST00000268049 LINC00467Q9BRT7 94 aa5.7□□□□□ -1.5
USP3-201ENST00000268049 PRYO14603 147 aa5.69□□□□□ -1.5
USP3-201ENST00000268049 F8P00451 2351 aa5.69□□□□□ -1.5
USP3-201ENST00000268049 CCKP06307 115 aa5.69□□□□□ -1.5
USP3-201ENST00000268049 C1orf137Q5JT78 98 aa5.69□□□□□ -1.5
USP3-201ENST00000268049 C18orf65Q6ZTR6 163 aa5.69□□□□□ -1.5
USP3-201ENST00000268049 MTORP42345 2549 aa5.69□□□□□ -1.5
USP3-201ENST00000268049 RAI1Q7Z5J4 1906 aaPredicted RBP5.69□□□□□ -1.5
USP3-201ENST00000268049 P0C879 139 aa5.69□□□□□ -1.5
USP3-201ENST00000268049 CDKN2A-AS1Q9UH64 79 aa5.69□□□□□ -1.5
USP3-201ENST00000268049 ACANP16112 2415 aa5.69□□□□□ -1.5
USP3-201ENST00000268049 ZNF80P51504 273 aaPredicted RBP5.69□□□□□ -1.5
USP3-201ENST00000268049 Q8N9L7 120 aa5.68□□□□□ -1.5
USP3-201ENST00000268049 DHRS4-AS1Q9P1J3 65 aa5.68□□□□□ -1.5
USP3-201ENST00000268049 PYGO1Q9Y3Y4 419 aa5.68□□□□□ -1.5
USP3-201ENST00000268049 Q6ZS46 218 aa5.68□□□□□ -1.5
USP3-201ENST00000268049 WFDC10AQ9H1F0 79 aa5.68□□□□□ -1.5
USP3-201ENST00000268049 FN1P02751 2386 aaKnown RBP5.68□□□□□ -1.5
USP3-201ENST00000268049 IGLV4-3A0A075B6K6 122 aa5.67□□□□□ -1.5
USP3-201ENST00000268049 TRBV7-7A0A0K0K1E9 115 aa5.67□□□□□ -1.5
USP3-201ENST00000268049 CRIP2P52943 208 aaPredicted RBP5.67□□□□□ -1.5
USP3-201ENST00000268049 CD164L2Q6UWJ8 174 aa5.67□□□□□ -1.5
USP3-201ENST00000268049 Q8N2B8 174 aa5.67□□□□□ -1.5
USP3-201ENST00000268049 FAM30AQ9NZY2 134 aa5.67□□□□□ -1.5
USP3-201ENST00000268049 IBA57-AS1B1ANH7 110 aa5.67□□□□□ -1.5
USP3-201ENST00000268049 BRWD1-AS2P59051 145 aa5.67□□□□□ -1.5
USP3-201ENST00000268049 RNF185Q96GF1 192 aa5.67□□□□□ -1.5
USP3-201ENST00000268049 ESRGQ1W209 222 aa5.67□□□□□ -1.5
USP3-201ENST00000268049 CRYGAP11844 174 aa5.66□□□□□ -1.5
USP3-201ENST00000268049 LINC01556Q5JQF7 62 aa5.66□□□□□ -1.5
USP3-201ENST00000268049 HELZ2Q9BYK8 2649 aaKnown RBP5.66□□□□□ -1.5
USP3-201ENST00000268049 C6orf99Q4VX62 202 aa5.66□□□□□ -1.5
USP3-201ENST00000268049 PRRC2CQ9Y520 2896 aaKnown RBP5.66□□□□□ -1.5
USP3-201ENST00000268049 SETD2Q9BYW2 2564 aaPredicted RBP5.66□□□□□ -1.5
USP3-201ENST00000268049 EIF4EBP1Q13541 118 aaPredicted RBP5.65□□□□□ -1.5
USP3-201ENST00000268049 WFDC13Q8IUB5 93 aa5.65□□□□□ -1.5
USP3-201ENST00000268049 A0A096LNI7 61 aa5.65□□□□□ -1.51
USP3-201ENST00000268049 RPL37AP61513 92 aaKnown RBP5.65□□□□□ -1.51
USP3-201ENST00000268049 M0R378 163 aa5.65□□□□□ -1.51
USP3-201ENST00000268049 NRACQ8N912 160 aa5.65□□□□□ -1.51
USP3-201ENST00000268049 TRBV6-5A0A0K0K1A5 114 aa5.64□□□□□ -1.51
USP3-201ENST00000268049 NBDYA0A0U1RRE5 68 aa5.64□□□□□ -1.51
USP3-201ENST00000268049 C2CD3Q4AC94 2353 aa5.64□□□□□ -1.51
USP3-201ENST00000268049 TNRC18O15417 2968 aaPredicted RBP5.64□□□□□ -1.51
USP3-201ENST00000268049 TNCP24821 2201 aa5.64□□□□□ -1.51
USP3-201ENST00000268049 CELA1Q9UNI1 258 aa5.64□□□□□ -1.51
USP3-201ENST00000268049 SMIM11BQ8TCY0 68 aa5.64□□□□□ -1.51
USP3-201ENST00000268049 Q6ZQY7 126 aa5.63□□□□□ -1.51
USP3-201ENST00000268049 SPINK6Q6UWN8 80 aa5.63□□□□□ -1.51
USP3-201ENST00000268049 SBSPONQ8IVN8 264 aa5.63□□□□□ -1.51
USP3-201ENST00000268049 TMEM254Q8TBM7 123 aa5.63□□□□□ -1.51
USP3-201ENST00000268049 USP24Q9UPU5 2620 aa5.63□□□□□ -1.51
USP3-201ENST00000268049 CRIP1P50238 77 aa5.63□□□□□ -1.51
USP3-201ENST00000268049 ODF3L2Q3SX64 289 aa5.63□□□□□ -1.51
USP3-201ENST00000268049 URB1-AS1Q96HZ7 61 aa5.63□□□□□ -1.51
USP3-201ENST00000268049 COX6B2Q6YFQ2 88 aa5.62□□□□□ -1.51
USP3-201ENST00000268049 Q8N3U1 123 aa5.62□□□□□ -1.51
USP3-201ENST00000268049 CIRBP-AS1Q8TBR5 109 aa5.62□□□□□ -1.51
USP3-201ENST00000268049 IGLV9-49A0A0B4J1Y8 123 aa5.62□□□□□ -1.51
USP3-201ENST00000268049 DEFB1P60022 68 aa5.62□□□□□ -1.51
USP3-201ENST00000268049 LAMA2P24043 3122 aaKnown RBP5.62□□□□□ -1.51
USP3-201ENST00000268049 PLXNB1O43157 2135 aa5.62□□□□□ -1.51
USP3-201ENST00000268049 NTM-AS1Q6ZSK4 140 aa5.61□□□□□ -1.51
USP3-201ENST00000268049 C10orf25Q5T742 122 aa5.61□□□□□ -1.51
USP3-201ENST00000268049 H3BNG1 76 aa5.61□□□□□ -1.51
USP3-201ENST00000268049 CXCL6P80162 114 aa5.61□□□□□ -1.51
USP3-201ENST00000268049 Q6ZSN1 163 aa5.61□□□□□ -1.51
USP3-201ENST00000268049 EPM2AB3EWF7 344 aa5.61□□□□□ -1.51
USP3-201ENST00000268049 LINC00208Q96KT6 92 aa5.61□□□□□ -1.51
USP3-201ENST00000268049 EGFEM1PQ0D2K5 195 aa5.6□□□□□ -1.51
USP3-201ENST00000268049 BEAN1Q3B7T3 259 aa5.6□□□□□ -1.51
USP3-201ENST00000268049 RTL8CO15255 209 aa5.6□□□□□ -1.51
USP3-201ENST00000268049 Q6ZRP5 223 aa5.6□□□□□ -1.51
USP3-201ENST00000268049 C2orf48Q96LS8 159 aa5.6□□□□□ -1.51
USP3-201ENST00000268049 M0QY20 66 aa5.59□□□□□ -1.51
USP3-201ENST00000268049 CDH23Q9H251 3354 aa5.59□□□□□ -1.51
USP3-201ENST00000268049 DCANP1Q8TF63 244 aa5.58□□□□□ -1.52
USP3-201ENST00000268049 LINC00846Q9NV44 126 aa5.57□□□□□ -1.52
USP3-201ENST00000268049 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.57□□□□□ -1.52
USP3-201ENST00000268049 COX17Q14061 63 aa5.57□□□□□ -1.52
USP3-201ENST00000268049 LYPD5Q6UWN5 251 aa5.57□□□□□ -1.52
USP3-201ENST00000268049 SZT2Q5T011 3432 aa5.57□□□□□ -1.52
USP3-201ENST00000268049 SORL1Q92673 2214 aa5.57□□□□□ -1.52
USP3-201ENST00000268049 TSHBP01222 138 aa5.56□□□□□ -1.52
USP3-201ENST00000268049 UNC80Q8N2C7 3258 aa5.56□□□□□ -1.52
USP3-201ENST00000268049 GAS8-AS1O95177 125 aa5.56□□□□□ -1.52
USP3-201ENST00000268049 CD164Q04900 197 aa5.56□□□□□ -1.52
USP3-201ENST00000268049 CFAP46Q8IYW2 2715 aa5.56□□□□□ -1.52
USP3-201ENST00000268049 TRBV10-3A0A0K0K1G6 114 aa5.56□□□□□ -1.52
USP3-201ENST00000268049 HCFC1P51610 2035 aa5.56□□□□□ -1.52
USP3-201ENST00000268049 A0A087WYN8 130 aa5.55□□□□□ -1.52
USP3-201ENST00000268049 LINC00959A0A1B0GUT2 108 aa5.55□□□□□ -1.52
USP3-201ENST00000268049 K7EIL1 84 aa5.55□□□□□ -1.52
USP3-201ENST00000268049 POLR2KP53803 58 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms