RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 IGLV4-69A0A075B6H9 119 aa4.2□□□□□ -1.74
VCAN-201ENST00000265077 GAS8-AS1O95177 125 aa4.2□□□□□ -1.74
VCAN-201ENST00000265077 Q8NA96 180 aa4.2□□□□□ -1.74
VCAN-201ENST00000265077 PCNTO95613 3336 aa4.19□□□□□ -1.74
VCAN-201ENST00000265077 DEFB135Q30KP9 77 aa4.19□□□□□ -1.74
VCAN-201ENST00000265077 C2orf48Q96LS8 159 aa4.19□□□□□ -1.74
VCAN-201ENST00000265077 REG3AQ06141 175 aa4.19□□□□□ -1.74
VCAN-201ENST00000265077 UBE2D4Q9Y2X8 147 aa4.19□□□□□ -1.74
VCAN-201ENST00000265077 ITPR2Q14571 2701 aa4.19□□□□□ -1.74
VCAN-201ENST00000265077 TRIOO75962 3097 aa4.19□□□□□ -1.74
VCAN-201ENST00000265077 C5orf42Q9H799 3197 aa4.19□□□□□ -1.74
VCAN-201ENST00000265077 POLR2KP53803 58 aaKnown RBP4.19□□□□□ -1.74
VCAN-201ENST00000265077 CD164L2Q6UWJ8 174 aa4.19□□□□□ -1.74
VCAN-201ENST00000265077 LMO4P61968 165 aa4.19□□□□□ -1.74
VCAN-201ENST00000265077 MRGPRG-AS1Q2M3A8 158 aa4.19□□□□□ -1.74
VCAN-201ENST00000265077 APCP25054 2843 aa4.19□□□□□ -1.74
VCAN-201ENST00000265077 NBEAQ8NFP9 2946 aa4.19□□□□□ -1.74
VCAN-201ENST00000265077 TRBV6-4A0A1B0GX49 114 aa4.19□□□□□ -1.74
VCAN-201ENST00000265077 H3BS24 57 aa4.19□□□□□ -1.74
VCAN-201ENST00000265077 TSHBP01222 138 aa4.19□□□□□ -1.74
VCAN-201ENST00000265077 CHD9Q3L8U1 2897 aa4.18□□□□□ -1.74
VCAN-201ENST00000265077 C22orf34Q6ZV56 151 aa4.18□□□□□ -1.74
VCAN-201ENST00000265077 SMAD5-AS1Q9Y6J3 95 aa4.18□□□□□ -1.74
VCAN-201ENST00000265077 LINC01548A6NM66 108 aa4.18□□□□□ -1.74
VCAN-201ENST00000265077 IGKV4-1P06312 121 aa4.18□□□□□ -1.74
VCAN-201ENST00000265077 C1orf229Q6ZS94 237 aaPredicted RBP4.18□□□□□ -1.74
VCAN-201ENST00000265077 ADORA2A-AS1P86434 159 aa4.18□□□□□ -1.74
VCAN-201ENST00000265077 DEFB114Q30KQ6 69 aa4.18□□□□□ -1.74
VCAN-201ENST00000265077 TRBV6-8A0A0A6YYG3 113 aa4.18□□□□□ -1.74
VCAN-201ENST00000265077 RPL28P46779 137 aaKnown RBP4.18□□□□□ -1.74
VCAN-201ENST00000265077 CELA1Q9UNI1 258 aa4.18□□□□□ -1.74
VCAN-201ENST00000265077 IGIPA6NJ69 53 aa4.18□□□□□ -1.74
VCAN-201ENST00000265077 F8W735 103 aaPredicted RBP4.18□□□□□ -1.74
VCAN-201ENST00000265077 Q6ZTI0 123 aa4.18□□□□□ -1.74
VCAN-201ENST00000265077 WFDC10AQ9H1F0 79 aa4.17□□□□□ -1.74
VCAN-201ENST00000265077 J3QKU1 62 aa4.17□□□□□ -1.74
VCAN-201ENST00000265077 TACC2O95359 2948 aa4.17□□□□□ -1.74
VCAN-201ENST00000265077 C7orf65Q6ZTY9 151 aa4.17□□□□□ -1.74
VCAN-201ENST00000265077 DHRS4-AS1Q9P1J3 65 aa4.17□□□□□ -1.74
VCAN-201ENST00000265077 RNASE3P12724 160 aaKnown RBP4.17□□□□□ -1.74
VCAN-201ENST00000265077 CHCHD10Q8WYQ3 142 aaPredicted RBP4.17□□□□□ -1.74
VCAN-201ENST00000265077 SMCR5Q8TEV8 140 aa4.17□□□□□ -1.74
VCAN-201ENST00000265077 Q6YL49 198 aa4.17□□□□□ -1.74
VCAN-201ENST00000265077 A0A1W2PNU3 283 aaPredicted RBP4.17□□□□□ -1.74
VCAN-201ENST00000265077 NTM-AS1Q6ZSK4 140 aa4.17□□□□□ -1.74
VCAN-201ENST00000265077 Q6ZVQ6 151 aa4.17□□□□□ -1.74
VCAN-201ENST00000265077 SMIM11BQ8TCY0 68 aa4.17□□□□□ -1.74
VCAN-201ENST00000265077 CHD7Q9P2D1 2997 aa4.17□□□□□ -1.74
VCAN-201ENST00000265077 FRYLO94915 3013 aa4.17□□□□□ -1.74
VCAN-201ENST00000265077 C6orf99Q4VX62 202 aa4.16□□□□□ -1.74
VCAN-201ENST00000265077 ADAMTSL4-AS1Q5T5F5 129 aa4.16□□□□□ -1.74
VCAN-201ENST00000265077 FAM30AQ9NZY2 134 aa4.16□□□□□ -1.74
VCAN-201ENST00000265077 FRYQ5TBA9 3013 aa4.16□□□□□ -1.74
VCAN-201ENST00000265077 LINC01547P58512 204 aaPredicted RBP4.16□□□□□ -1.74
VCAN-201ENST00000265077 MGAQ8IWI9 3026 aa4.16□□□□□ -1.74
VCAN-201ENST00000265077 ZNF73O43830 326 aaPredicted RBP4.16□□□□□ -1.74
VCAN-201ENST00000265077 COX8CQ7Z4L0 72 aa4.16□□□□□ -1.74
VCAN-201ENST00000265077 IGLV2-18A0A075B6J9 118 aa4.16□□□□□ -1.74
VCAN-201ENST00000265077 Q8IZM0 81 aa4.16□□□□□ -1.74
VCAN-201ENST00000265077 HCG22E2RYF7 251 aa4.16□□□□□ -1.74
VCAN-201ENST00000265077 K7ERS5 55 aa4.16□□□□□ -1.74
VCAN-201ENST00000265077 A0A087WYN8 130 aa4.15□□□□□ -1.74
VCAN-201ENST00000265077 KMT2BQ9UMN6 2715 aaPredicted RBP4.15□□□□□ -1.74
VCAN-201ENST00000265077 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.15□□□□□ -1.74
VCAN-201ENST00000265077 Q6ZSV7 163 aa4.15□□□□□ -1.74
VCAN-201ENST00000265077 MDFIQ99750 246 aa4.15□□□□□ -1.74
VCAN-201ENST00000265077 LINC00474Q9P2X8 69 aa4.15□□□□□ -1.74
VCAN-201ENST00000265077 DNAJC9-AS1A6NH13 148 aa4.15□□□□□ -1.75
VCAN-201ENST00000265077 Q5XG85 94 aa4.15□□□□□ -1.75
VCAN-201ENST00000265077 Q8N814 137 aa4.15□□□□□ -1.75
VCAN-201ENST00000265077 C11orf45Q8TAV5 145 aa4.15□□□□□ -1.75
VCAN-201ENST00000265077 SYCNQ0VAF6 134 aa4.14□□□□□ -1.75
VCAN-201ENST00000265077 LINC00208Q96KT6 92 aa4.14□□□□□ -1.75
VCAN-201ENST00000265077 C1orf158Q8N1D5 194 aa4.14□□□□□ -1.75
VCAN-201ENST00000265077 ATP11AUNQ6ZP68 121 aa4.14□□□□□ -1.75
VCAN-201ENST00000265077 FLNCQ14315 2725 aa4.14□□□□□ -1.75
VCAN-201ENST00000265077 ERC2-IT1O76042 136 aa4.13□□□□□ -1.75
VCAN-201ENST00000265077 CDC42SE2Q9NRR3 84 aa4.13□□□□□ -1.75
VCAN-201ENST00000265077 UBR5O95071 2799 aaPredicted RBP4.13□□□□□ -1.75
VCAN-201ENST00000265077 KLKP1Q107X0 134 aa4.13□□□□□ -1.75
VCAN-201ENST00000265077 LCA10Q71F78 164 aa4.13□□□□□ -1.75
VCAN-201ENST00000265077 H7BZZ5 65 aa4.13□□□□□ -1.75
VCAN-201ENST00000265077 DEFB4AO15263 64 aa4.13□□□□□ -1.75
VCAN-201ENST00000265077 CDSNQ15517 529 aa4.13□□□□□ -1.75
VCAN-201ENST00000265077 PSMG3-AS1Q96PY0 264 aa4.13□□□□□ -1.75
VCAN-201ENST00000265077 C3orf84H3BNL1 204 aa4.13□□□□□ -1.75
VCAN-201ENST00000265077 PRR9Q5T870 116 aa4.13□□□□□ -1.75
VCAN-201ENST00000265077 LELP1Q5T871 98 aa4.13□□□□□ -1.75
VCAN-201ENST00000265077 M0R378 163 aa4.13□□□□□ -1.75
VCAN-201ENST00000265077 RBM12B-AS1Q9P1G2 102 aa4.13□□□□□ -1.75
VCAN-201ENST00000265077 KALRNO60229 2985 aa4.13□□□□□ -1.75
VCAN-201ENST00000265077 PRM2P04554 102 aa4.13□□□□□ -1.75
VCAN-201ENST00000265077 VPS13AQ96RL7 3174 aa4.13□□□□□ -1.75
VCAN-201ENST00000265077 LINC00482Q8N8I6 264 aa4.13□□□□□ -1.75
VCAN-201ENST00000265077 C8orf87E5RJ46 101 aa4.12□□□□□ -1.75
VCAN-201ENST00000265077 Q6ZQY7 126 aa4.12□□□□□ -1.75
VCAN-201ENST00000265077 WFDC10BQ8IUB3 73 aa4.12□□□□□ -1.75
VCAN-201ENST00000265077 LINC00242Q5T6M2 205 aa4.12□□□□□ -1.75
VCAN-201ENST00000265077 Q9UF83 564 aa4.12□□□□□ -1.75
VCAN-201ENST00000265077 LINC00959A0A1B0GUT2 108 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms