RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 TINCRA0A1B0GVN0 87 aa10.28□□□□□ -0.76
TRAFD1-201ENST00000257604 PIK3CD-AS1Q5SR53 167 aa10.28□□□□□ -0.76
TRAFD1-201ENST00000257604 CDC42SE2Q9NRR3 84 aa10.27□□□□□ -0.77
TRAFD1-201ENST00000257604 LST1O00453 97 aa10.26□□□□□ -0.77
TRAFD1-201ENST00000257604 TRBV6-4A0A1B0GX49 114 aa10.26□□□□□ -0.77
TRAFD1-201ENST00000257604 CYSRT1A8MQ03 144 aa10.26□□□□□ -0.77
TRAFD1-201ENST00000257604 SPANXDQ9BXN6 97 aa10.26□□□□□ -0.77
TRAFD1-201ENST00000257604 SPANXCQ9NY87 97 aa10.26□□□□□ -0.77
TRAFD1-201ENST00000257604 TRBV6-8A0A0A6YYG3 113 aa10.26□□□□□ -0.77
TRAFD1-201ENST00000257604 KRTAP24-1Q3LI83 254 aa10.25□□□□□ -0.77
TRAFD1-201ENST00000257604 PFN2P35080 140 aa10.25□□□□□ -0.77
TRAFD1-201ENST00000257604 FAM236AA0A1B0GUQ0 79 aa10.24□□□□□ -0.77
TRAFD1-201ENST00000257604 FAM236BA0A1B0GV22 79 aa10.24□□□□□ -0.77
TRAFD1-201ENST00000257604 OVOL2Q9BRP0 275 aa10.24□□□□□ -0.77
TRAFD1-201ENST00000257604 APOC4P55056 127 aa10.24□□□□□ -0.77
TRAFD1-201ENST00000257604 HERVK_113P63121 156 aa10.24□□□□□ -0.77
TRAFD1-201ENST00000257604 H3BT86 120 aa10.23□□□□□ -0.77
TRAFD1-201ENST00000257604 MRAPQ8TCY5 172 aa10.23□□□□□ -0.77
TRAFD1-201ENST00000257604 PRO0255Q9UI72 69 aa10.22□□□□□ -0.77
TRAFD1-201ENST00000257604 SOSTDC1Q6X4U4 206 aa10.22□□□□□ -0.77
TRAFD1-201ENST00000257604 ANGP03950 147 aaKnown RBP10.22□□□□□ -0.77
TRAFD1-201ENST00000257604 C5orf47Q569G3 176 aa10.21□□□□□ -0.77
TRAFD1-201ENST00000257604 LINC00308Q8TCZ7 52 aa10.21□□□□□ -0.77
TRAFD1-201ENST00000257604 SMIM1B2RUZ4 78 aa10.21□□□□□ -0.78
TRAFD1-201ENST00000257604 C9orf153Q5TBE3 101 aa10.2□□□□□ -0.78
TRAFD1-201ENST00000257604 FAM19A5Q7Z5A7 132 aaPredicted RBP10.2□□□□□ -0.78
TRAFD1-201ENST00000257604 LINC00526Q96FQ7 95 aa10.2□□□□□ -0.78
TRAFD1-201ENST00000257604 CIRBPQ14011 172 aaKnown RBP10.2□□□□□ -0.78
TRAFD1-201ENST00000257604 LINC00269Q8N2A0 174 aa10.2□□□□□ -0.78
TRAFD1-201ENST00000257604 LINC00158P58513 81 aa10.2□□□□□ -0.78
TRAFD1-201ENST00000257604 GAGE2AQ6NT46 116 aa10.2□□□□□ -0.78
TRAFD1-201ENST00000257604 SMCR5Q8TEV8 140 aa10.2□□□□□ -0.78
TRAFD1-201ENST00000257604 Q6Q795 121 aa10.19□□□□□ -0.78
TRAFD1-201ENST00000257604 SMIM9A6NGZ8 99 aa10.19□□□□□ -0.78
TRAFD1-201ENST00000257604 FAM218AQ96MZ4 157 aa10.19□□□□□ -0.78
TRAFD1-201ENST00000257604 NDUFA1O15239 70 aa10.18□□□□□ -0.78
TRAFD1-201ENST00000257604 ATP5G1P05496 136 aa10.18□□□□□ -0.78
TRAFD1-201ENST00000257604 KRTAP10-11P60412 298 aa10.18□□□□□ -0.78
TRAFD1-201ENST00000257604 DEFB121Q5J5C9 76 aa10.18□□□□□ -0.78
TRAFD1-201ENST00000257604 C6orf226Q5I0X4 101 aa10.17□□□□□ -0.78
TRAFD1-201ENST00000257604 OR13C6PQ8NH95 151 aa10.17□□□□□ -0.78
TRAFD1-201ENST00000257604 BAALC-AS2P0C853 105 aa10.17□□□□□ -0.78
TRAFD1-201ENST00000257604 TIRAPP58753 221 aa10.16□□□□□ -0.78
TRAFD1-201ENST00000257604 KIR2DL5BQ8NHK3 375 aa10.16□□□□□ -0.78
TRAFD1-201ENST00000257604 SPART-AS1P0CW21 52 aa10.16□□□□□ -0.78
TRAFD1-201ENST00000257604 COX7A2LO14548 114 aa10.15□□□□□ -0.78
TRAFD1-201ENST00000257604 SLPIP03973 132 aa10.15□□□□□ -0.78
TRAFD1-201ENST00000257604 C9orf129Q5T035 196 aaKnown RBP10.15□□□□□ -0.78
TRAFD1-201ENST00000257604 LINC01600Q96MT4 127 aa10.15□□□□□ -0.78
TRAFD1-201ENST00000257604 IGKV3D-7A0A0C4DH55 119 aa10.14□□□□□ -0.79
TRAFD1-201ENST00000257604 COX7B2Q8TF08 81 aa10.14□□□□□ -0.79
TRAFD1-201ENST00000257604 KLK12Q9UKR0 248 aa10.14□□□□□ -0.79
TRAFD1-201ENST00000257604 LINC00959A0A1B0GUT2 108 aa10.13□□□□□ -0.79
TRAFD1-201ENST00000257604 HRCT1Q6UXD1 115 aa10.13□□□□□ -0.79
TRAFD1-201ENST00000257604 MIR7-3HGQ8N6C7 128 aa10.13□□□□□ -0.79
TRAFD1-201ENST00000257604 Q8NAQ8 132 aa10.13□□□□□ -0.79
TRAFD1-201ENST00000257604 ANK2Q01484 3957 aa10.12□□□□□ -0.79
TRAFD1-201ENST00000257604 FAM240AA0A1B0GVK7 77 aa10.12□□□□□ -0.79
TRAFD1-201ENST00000257604 SDIM1Q6ZPB5 146 aa10.12□□□□□ -0.79
TRAFD1-201ENST00000257604 STAB2Q8WWQ8 2551 aa10.12□□□□□ -0.79
TRAFD1-201ENST00000257604 LYRM9A8MSI8 78 aa10.12□□□□□ -0.79
TRAFD1-201ENST00000257604 TIMM17BO60830 172 aa10.12□□□□□ -0.79
TRAFD1-201ENST00000257604 MALP21145 153 aa10.12□□□□□ -0.79
TRAFD1-201ENST00000257604 SS18Q15532 418 aa10.12□□□□□ -0.79
TRAFD1-201ENST00000257604 C14orf132Q9NPU4 83 aa10.11□□□□□ -0.79
TRAFD1-201ENST00000257604 Q6ZTC4 211 aa10.11□□□□□ -0.79
TRAFD1-201ENST00000257604 C4orf26Q17RF5 130 aa10.1□□□□□ -0.79
TRAFD1-201ENST00000257604 WFDC9Q8NEX5 89 aa10.1□□□□□ -0.79
TRAFD1-201ENST00000257604 IGLV5-45A0A087WSX0 123 aa10.1□□□□□ -0.79
TRAFD1-201ENST00000257604 IGLV5-39A0A0G2JS06 123 aa10.1□□□□□ -0.79
TRAFD1-201ENST00000257604 TRBV7-7A0A0K0K1E9 115 aa10.1□□□□□ -0.79
TRAFD1-201ENST00000257604 C9orf116Q5BN46 136 aaPredicted RBP10.1□□□□□ -0.79
TRAFD1-201ENST00000257604 A0A087WVE0 104 aa10.1□□□□□ -0.79
TRAFD1-201ENST00000257604 NANOS2P60321 138 aaKnown RBP10.1□□□□□ -0.79
TRAFD1-201ENST00000257604 MIFP14174 115 aa10.09□□□□□ -0.79
TRAFD1-201ENST00000257604 A0A087WYN8 130 aa10.08□□□□□ -0.8
TRAFD1-201ENST00000257604 REG3AQ06141 175 aa10.08□□□□□ -0.8
TRAFD1-201ENST00000257604 C22orf24Q9Y442 160 aa10.08□□□□□ -0.8
TRAFD1-201ENST00000257604 IGHV3OR16-9A0A0B4J2B5 98 aa10.08□□□□□ -0.8
TRAFD1-201ENST00000257604 A0A0J9YWU9 116 aa10.08□□□□□ -0.8
TRAFD1-201ENST00000257604 PKIGQ9Y2B9 76 aa10.08□□□□□ -0.8
TRAFD1-201ENST00000257604 CHCHD10Q8WYQ3 142 aaPredicted RBP10.07□□□□□ -0.8
TRAFD1-201ENST00000257604 PRR3P79522 188 aaKnown RBP10.07□□□□□ -0.8
TRAFD1-201ENST00000257604 LINC00337Q8N6G1 96 aa10.07□□□□□ -0.8
TRAFD1-201ENST00000257604 TENM2Q9NT68 2774 aa10.06□□□□□ -0.8
TRAFD1-201ENST00000257604 NCR3O14931 201 aa10.06□□□□□ -0.8
TRAFD1-201ENST00000257604 DSCR8Q96T75 97 aa10.06□□□□□ -0.8
TRAFD1-201ENST00000257604 LINC00643Q86TS7 51 aa10.05□□□□□ -0.8
TRAFD1-201ENST00000257604 C1orf43Q9BWL3 253 aa10.05□□□□□ -0.8
TRAFD1-201ENST00000257604 hADV29S1A0JD25 119 aa10.05□□□□□ -0.8
TRAFD1-201ENST00000257604 C6orf223Q8N319 242 aa10.05□□□□□ -0.8
TRAFD1-201ENST00000257604 TMEM126AQ9H061 195 aa10.05□□□□□ -0.8
TRAFD1-201ENST00000257604 SND1-IT1Q9HBX3 110 aa10.05□□□□□ -0.8
TRAFD1-201ENST00000257604 DNAL4O96015 105 aa10.04□□□□□ -0.8
TRAFD1-201ENST00000257604 CRPP02741 224 aa10.04□□□□□ -0.8
TRAFD1-201ENST00000257604 LINC00612Q8N6U2 182 aa10.04□□□□□ -0.8
TRAFD1-201ENST00000257604 LECT2O14960 151 aa10.04□□□□□ -0.8
TRAFD1-201ENST00000257604 ACYP1P07311 99 aa10.04□□□□□ -0.8
TRAFD1-201ENST00000257604 KPRPQ5T749 579 aaPredicted RBP10.04□□□□□ -0.8
TRAFD1-201ENST00000257604 WFDC10BQ8IUB3 73 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms