RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 C6orf226Q5I0X4 101 aa11.26□□□□□ -0.61
SNRPA1-201ENST00000254193 TRGC2P03986 189 aa11.25□□□□□ -0.61
SNRPA1-201ENST00000254193 CKS1BP61024 79 aa11.25□□□□□ -0.61
SNRPA1-201ENST00000254193 Q6ZRP5 223 aa11.25□□□□□ -0.61
SNRPA1-201ENST00000254193 Q8IZM0 81 aa11.25□□□□□ -0.61
SNRPA1-201ENST00000254193 IGLV5-45A0A087WSX0 123 aa11.24□□□□□ -0.61
SNRPA1-201ENST00000254193 TRBV30A0A0K0K1B3 111 aa11.24□□□□□ -0.61
SNRPA1-201ENST00000254193 TLX1NBP0CAT3 122 aa11.24□□□□□ -0.61
SNRPA1-201ENST00000254193 GAGE2EQ4V326 116 aa11.24□□□□□ -0.61
SNRPA1-201ENST00000254193 C9orf116Q5BN46 136 aaPredicted RBP11.24□□□□□ -0.61
SNRPA1-201ENST00000254193 GAGE2DQ9UEU5 116 aa11.24□□□□□ -0.61
SNRPA1-201ENST00000254193 SMIM1B2RUZ4 78 aa11.23□□□□□ -0.61
SNRPA1-201ENST00000254193 CHCHD1Q96BP2 118 aaKnown RBP11.23□□□□□ -0.61
SNRPA1-201ENST00000254193 COLCA2A8K830 154 aa11.22□□□□□ -0.61
SNRPA1-201ENST00000254193 MYCBP2O75592 4640 aa11.22□□□□□ -0.61
SNRPA1-201ENST00000254193 ATP5LO75964 103 aa11.22□□□□□ -0.61
SNRPA1-201ENST00000254193 SPINK8P0C7L1 97 aa11.22□□□□□ -0.61
SNRPA1-201ENST00000254193 IGLC3P0DOY3 106 aa11.21□□□□□ -0.61
SNRPA1-201ENST00000254193 BAGE3Q86Y29 109 aa11.21□□□□□ -0.61
SNRPA1-201ENST00000254193 FAM168BA1KXE4 195 aa11.2□□□□□ -0.62
SNRPA1-201ENST00000254193 NDUFC2-KCTD14E9PQ53 114 aa11.19□□□□□ -0.62
SNRPA1-201ENST00000254193 PRR3P79522 188 aaKnown RBP11.19□□□□□ -0.62
SNRPA1-201ENST00000254193 COX7B2Q8TF08 81 aa11.19□□□□□ -0.62
SNRPA1-201ENST00000254193 F8VRH5 84 aa11.18□□□□□ -0.62
SNRPA1-201ENST00000254193 H3BRM9 83 aa11.18□□□□□ -0.62
SNRPA1-201ENST00000254193 SCO1O75880 301 aa11.18□□□□□ -0.62
SNRPA1-201ENST00000254193 FAM19A2Q8N3H0 131 aa11.18□□□□□ -0.62
SNRPA1-201ENST00000254193 DMBT1Q9UGM3 2413 aaPredicted RBP11.18□□□□□ -0.62
SNRPA1-201ENST00000254193 KRTAP29-1A8MX34 341 aaPredicted RBP11.17□□□□□ -0.62
SNRPA1-201ENST00000254193 J3QL48 77 aa11.17□□□□□ -0.62
SNRPA1-201ENST00000254193 HSBP1O75506 76 aa11.17□□□□□ -0.62
SNRPA1-201ENST00000254193 ZNF22P17026 224 aaPredicted RBP11.17□□□□□ -0.62
SNRPA1-201ENST00000254193 PHF5AQ7RTV0 110 aaKnown RBP11.17□□□□□ -0.62
SNRPA1-201ENST00000254193 CXCL5P42830 114 aa11.16□□□□□ -0.62
SNRPA1-201ENST00000254193 FAM19A5Q7Z5A7 132 aaPredicted RBP11.16□□□□□ -0.62
SNRPA1-201ENST00000254193 IFI27L1Q96BM0 104 aa11.16□□□□□ -0.62
SNRPA1-201ENST00000254193 C11orf86A6NJI1 115 aa11.15□□□□□ -0.62
SNRPA1-201ENST00000254193 SERF1AO75920 110 aa11.15□□□□□ -0.62
SNRPA1-201ENST00000254193 LINC00310P59036 64 aa11.15□□□□□ -0.62
SNRPA1-201ENST00000254193 C9orf129Q5T035 196 aaKnown RBP11.15□□□□□ -0.62
SNRPA1-201ENST00000254193 KRTAP7-1Q8IUC3 87 aa11.14□□□□□ -0.63
SNRPA1-201ENST00000254193 CHTOPQ9Y3Y2 248 aaKnown RBP11.14□□□□□ -0.63
SNRPA1-201ENST00000254193 IGLV5-39A0A0G2JS06 123 aa11.13□□□□□ -0.63
SNRPA1-201ENST00000254193 XAGE1AQ9HD64 81 aa11.13□□□□□ -0.63
SNRPA1-201ENST00000254193 OXTP01178 125 aa11.12□□□□□ -0.63
SNRPA1-201ENST00000254193 TMEM170BQ5T4T1 132 aa11.12□□□□□ -0.63
SNRPA1-201ENST00000254193 TRAV12-1A0A0B4J245 112 aa11.11□□□□□ -0.63
SNRPA1-201ENST00000254193 NUPR1O60356 82 aa11.11□□□□□ -0.63
SNRPA1-201ENST00000254193 PSORS1C2Q9UIG4 136 aa11.11□□□□□ -0.63
SNRPA1-201ENST00000254193 M0QXV9 152 aa11.09□□□□□ -0.63
SNRPA1-201ENST00000254193 KRTAP11-1Q8IUC1 163 aa11.09□□□□□ -0.63
SNRPA1-201ENST00000254193 SERTAD4-AS1Q5TG53 156 aa11.08□□□□□ -0.64
SNRPA1-201ENST00000254193 LRP1Q07954 4544 aaKnown RBP11.08□□□□□ -0.64
SNRPA1-201ENST00000254193 H0Y8G0 127 aa11.07□□□□□ -0.64
SNRPA1-201ENST00000254193 LEPROTL1O95214 131 aa11.07□□□□□ -0.64
SNRPA1-201ENST00000254193 HERC1Q15751 4861 aa11.06□□□□□ -0.64
SNRPA1-201ENST00000254193 SRSF9Q13242 221 aaKnown RBP eCLIP11.06□□□□□ -0.64
SNRPA1-201ENST00000254193 C1orf137Q5JT78 98 aa11.06□□□□□ -0.64
SNRPA1-201ENST00000254193 FABP4P15090 132 aa11.05□□□□□ -0.64
SNRPA1-201ENST00000254193 TMEM223A0PJW6 202 aa11.04□□□□□ -0.64
SNRPA1-201ENST00000254193 PFN2P35080 140 aa11.04□□□□□ -0.64
SNRPA1-201ENST00000254193 UBE2BP63146 152 aa11.04□□□□□ -0.64
SNRPA1-201ENST00000254193 ODF1Q14990 250 aa11.04□□□□□ -0.64
SNRPA1-201ENST00000254193 SPINK6Q6UWN8 80 aa11.04□□□□□ -0.64
SNRPA1-201ENST00000254193 ZNF625Q96I27 306 aaPredicted RBP11.04□□□□□ -0.64
SNRPA1-201ENST00000254193 C22orf24Q9Y442 160 aa11.04□□□□□ -0.64
SNRPA1-201ENST00000254193 HIST1H2BKO60814 126 aa11.03□□□□□ -0.64
SNRPA1-201ENST00000254193 HIST1H2BJP06899 126 aa11.03□□□□□ -0.64
SNRPA1-201ENST00000254193 HIST1H2BOP23527 126 aa11.03□□□□□ -0.64
SNRPA1-201ENST00000254193 HIST1H2BBP33778 126 aa11.03□□□□□ -0.64
SNRPA1-201ENST00000254193 HIST1H2BDP58876 126 aa11.03□□□□□ -0.64
SNRPA1-201ENST00000254193 HIST1H2BCP62807 126 aa11.03□□□□□ -0.64
SNRPA1-201ENST00000254193 HIST2H2BEQ16778 126 aa11.03□□□□□ -0.64
SNRPA1-201ENST00000254193 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.03□□□□□ -0.64
SNRPA1-201ENST00000254193 HIST1H2BHQ93079 126 aa11.03□□□□□ -0.64
SNRPA1-201ENST00000254193 HIST1H2BNQ99877 126 aa11.03□□□□□ -0.64
SNRPA1-201ENST00000254193 HIST1H2BMQ99879 126 aa11.03□□□□□ -0.64
SNRPA1-201ENST00000254193 HSPB8Q9UJY1 196 aa11.03□□□□□ -0.64
SNRPA1-201ENST00000254193 ERG28Q9UKR5 140 aa11.01□□□□□ -0.65
SNRPA1-201ENST00000254193 MT1HL1P0DM35 61 aa11□□□□□ -0.65
SNRPA1-201ENST00000254193 PKHD1L1Q86WI1 4243 aa10.99□□□□□ -0.65
SNRPA1-201ENST00000254193 FAT3Q8TDW7 4589 aa10.99□□□□□ -0.65
SNRPA1-201ENST00000254193 IGLV7-43P04211 117 aa10.99□□□□□ -0.65
SNRPA1-201ENST00000254193 LBHQ53QV2 105 aaPredicted RBP10.99□□□□□ -0.65
SNRPA1-201ENST00000254193 SFTA2Q6UW10 78 aa10.98□□□□□ -0.65
SNRPA1-201ENST00000254193 MRPL55Q7Z7F7 128 aaKnown RBP10.98□□□□□ -0.65
SNRPA1-201ENST00000254193 PMCHL2Q9BQD1 86 aa10.98□□□□□ -0.65
SNRPA1-201ENST00000254193 SND1-IT1Q9HBX3 110 aa10.97□□□□□ -0.65
SNRPA1-201ENST00000254193 TP73-AS1Q9UF72 201 aa10.97□□□□□ -0.65
SNRPA1-201ENST00000254193 PLA2G2DQ9UNK4 145 aa10.97□□□□□ -0.65
SNRPA1-201ENST00000254193 COX17Q14061 63 aa10.96□□□□□ -0.65
SNRPA1-201ENST00000254193 REG3GQ6UW15 175 aa10.96□□□□□ -0.65
SNRPA1-201ENST00000254193 LINC01600Q96MT4 127 aa10.96□□□□□ -0.65
SNRPA1-201ENST00000254193 GAGE10A6NGK3 116 aa10.95□□□□□ -0.66
SNRPA1-201ENST00000254193 DPM2O94777 84 aa10.95□□□□□ -0.66
SNRPA1-201ENST00000254193 PLNP26678 52 aa10.95□□□□□ -0.66
SNRPA1-201ENST00000254193 MAP1LC3CQ9BXW4 147 aa10.95□□□□□ -0.66
SNRPA1-201ENST00000254193 A0A0U1RRA0 63 aa10.94□□□□□ -0.66
SNRPA1-201ENST00000254193 LINC00158P58513 81 aa10.94□□□□□ -0.66
SNRPA1-201ENST00000254193 LINC00167Q96N53 147 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms