RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 CHCHD1Q96BP2 118 aaKnown RBP15.72■□□□□ 0.11
LSM7-201ENST00000252622 SMIM1B2RUZ4 78 aa15.71■□□□□ 0.11
LSM7-201ENST00000252622 ATP5LO75964 103 aa15.71■□□□□ 0.11
LSM7-201ENST00000252622 CKS1BP61024 79 aa15.71■□□□□ 0.11
LSM7-201ENST00000252622 C6orf226Q5I0X4 101 aa15.71■□□□□ 0.11
LSM7-201ENST00000252622 HNRNPA3P51991 378 aaKnown RBP15.7■□□□□ 0.1
LSM7-201ENST00000252622 Q6ZRP5 223 aa15.7■□□□□ 0.1
LSM7-201ENST00000252622 A0A1W2PNN7 141 aa15.69■□□□□ 0.1
LSM7-201ENST00000252622 IGLC3P0DOY3 106 aa15.69■□□□□ 0.1
LSM7-201ENST00000252622 C9orf116Q5BN46 136 aaPredicted RBP15.69■□□□□ 0.1
LSM7-201ENST00000252622 TRGC2P03986 189 aa15.68■□□□□ 0.1
LSM7-201ENST00000252622 FAT3Q8TDW7 4589 aa15.67■□□□□ 0.1
LSM7-201ENST00000252622 NDUFC2-KCTD14E9PQ53 114 aa15.67■□□□□ 0.1
LSM7-201ENST00000252622 CXCL5P42830 114 aa15.67■□□□□ 0.1
LSM7-201ENST00000252622 NDUFA6P56556 154 aa15.67■□□□□ 0.1
LSM7-201ENST00000252622 DMBT1Q9UGM3 2413 aaPredicted RBP15.67■□□□□ 0.1
LSM7-201ENST00000252622 KRTAP29-1A8MX34 341 aaPredicted RBP15.66■□□□□ 0.1
LSM7-201ENST00000252622 H3BRM9 83 aa15.66■□□□□ 0.1
LSM7-201ENST00000252622 F8VRH5 84 aa15.65■□□□□ 0.1
LSM7-201ENST00000252622 PRR3P79522 188 aaKnown RBP15.65■□□□□ 0.1
LSM7-201ENST00000252622 HERC1Q15751 4861 aa15.65■□□□□ 0.1
LSM7-201ENST00000252622 COLCA2A8K830 154 aa15.64■□□□□ 0.09
LSM7-201ENST00000252622 GAGE2EQ4V326 116 aa15.64■□□□□ 0.09
LSM7-201ENST00000252622 BAGE3Q86Y29 109 aa15.64■□□□□ 0.09
LSM7-201ENST00000252622 COX7B2Q8TF08 81 aa15.64■□□□□ 0.09
LSM7-201ENST00000252622 GAGE2DQ9UEU5 116 aa15.64■□□□□ 0.09
LSM7-201ENST00000252622 LRP1Q07954 4544 aaKnown RBP15.63■□□□□ 0.09
LSM7-201ENST00000252622 SPINK8P0C7L1 97 aa15.63■□□□□ 0.09
LSM7-201ENST00000252622 HSBP1O75506 76 aa15.61■□□□□ 0.09
LSM7-201ENST00000252622 ZNF22P17026 224 aaPredicted RBP15.61■□□□□ 0.09
LSM7-201ENST00000252622 OXTP01178 125 aa15.6■□□□□ 0.09
LSM7-201ENST00000252622 J3QL48 77 aa15.59■□□□□ 0.09
LSM7-201ENST00000252622 IGLV5-39A0A0G2JS06 123 aa15.58■□□□□ 0.08
LSM7-201ENST00000252622 FAM168BA1KXE4 195 aa15.58■□□□□ 0.08
LSM7-201ENST00000252622 IFI27L1Q96BM0 104 aa15.58■□□□□ 0.08
LSM7-201ENST00000252622 C9orf129Q5T035 196 aaKnown RBP15.57■□□□□ 0.08
LSM7-201ENST00000252622 PHF5AQ7RTV0 110 aaKnown RBP15.57■□□□□ 0.08
LSM7-201ENST00000252622 TRAV12-1A0A0B4J245 112 aa15.56■□□□□ 0.08
LSM7-201ENST00000252622 C11orf86A6NJI1 115 aa15.56■□□□□ 0.08
LSM7-201ENST00000252622 FAM19A5Q7Z5A7 132 aaPredicted RBP15.56■□□□□ 0.08
LSM7-201ENST00000252622 CHTOPQ9Y3Y2 248 aaKnown RBP15.56■□□□□ 0.08
LSM7-201ENST00000252622 LINC00310P59036 64 aa15.55■□□□□ 0.08
LSM7-201ENST00000252622 FAM19A2Q8N3H0 131 aa15.55■□□□□ 0.08
LSM7-201ENST00000252622 SERF1AO75920 110 aa15.54■□□□□ 0.08
LSM7-201ENST00000252622 KRTAP7-1Q8IUC3 87 aa15.54■□□□□ 0.08
LSM7-201ENST00000252622 TMEM170BQ5T4T1 132 aa15.52■□□□□ 0.08
LSM7-201ENST00000252622 SCO1O75880 301 aa15.51■□□□□ 0.07
LSM7-201ENST00000252622 PSORS1C2Q9UIG4 136 aa15.51■□□□□ 0.07
LSM7-201ENST00000252622 M0QXV9 152 aa15.5■□□□□ 0.07
LSM7-201ENST00000252622 XAGE1AQ9HD64 81 aa15.49■□□□□ 0.07
LSM7-201ENST00000252622 LEPROTL1O95214 131 aa15.48■□□□□ 0.07
LSM7-201ENST00000252622 ODF1Q14990 250 aa15.47■□□□□ 0.07
LSM7-201ENST00000252622 SPINK6Q6UWN8 80 aa15.47■□□□□ 0.07
LSM7-201ENST00000252622 NUPR1O60356 82 aa15.45■□□□□ 0.06
LSM7-201ENST00000252622 SRSF9Q13242 221 aaKnown RBP eCLIP15.45■□□□□ 0.06
LSM7-201ENST00000252622 SERTAD4-AS1Q5TG53 156 aa15.45■□□□□ 0.06
LSM7-201ENST00000252622 SFTA2Q6UW10 78 aa15.45■□□□□ 0.06
LSM7-201ENST00000252622 TMEM223A0PJW6 202 aa15.44■□□□□ 0.06
LSM7-201ENST00000252622 C1orf137Q5JT78 98 aa15.44■□□□□ 0.06
LSM7-201ENST00000252622 KRTAP11-1Q8IUC1 163 aa15.43■□□□□ 0.06
LSM7-201ENST00000252622 HSPB8Q9UJY1 196 aa15.43■□□□□ 0.06
LSM7-201ENST00000252622 UBE2BP63146 152 aa15.42■□□□□ 0.06
LSM7-201ENST00000252622 C22orf24Q9Y442 160 aa15.41■□□□□ 0.06
LSM7-201ENST00000252622 ZNF625Q96I27 306 aaPredicted RBP15.4■□□□□ 0.06
LSM7-201ENST00000252622 TP73-AS1Q9UF72 201 aa15.4■□□□□ 0.06
LSM7-201ENST00000252622 ERG28Q9UKR5 140 aa15.4■□□□□ 0.06
LSM7-201ENST00000252622 PLA2G2DQ9UNK4 145 aa15.4■□□□□ 0.06
LSM7-201ENST00000252622 H0Y8G0 127 aa15.39■□□□□ 0.05
LSM7-201ENST00000252622 HIST1H2BKO60814 126 aa15.39■□□□□ 0.05
LSM7-201ENST00000252622 HIST1H2BJP06899 126 aa15.39■□□□□ 0.05
LSM7-201ENST00000252622 HIST1H2BOP23527 126 aa15.39■□□□□ 0.05
LSM7-201ENST00000252622 HIST1H2BBP33778 126 aa15.39■□□□□ 0.05
LSM7-201ENST00000252622 HIST1H2BDP58876 126 aa15.39■□□□□ 0.05
LSM7-201ENST00000252622 HIST1H2BCP62807 126 aa15.39■□□□□ 0.05
LSM7-201ENST00000252622 HIST2H2BEQ16778 126 aa15.39■□□□□ 0.05
LSM7-201ENST00000252622 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.39■□□□□ 0.05
LSM7-201ENST00000252622 HIST1H2BHQ93079 126 aa15.39■□□□□ 0.05
LSM7-201ENST00000252622 HIST1H2BNQ99877 126 aa15.39■□□□□ 0.05
LSM7-201ENST00000252622 HIST1H2BMQ99879 126 aa15.39■□□□□ 0.05
LSM7-201ENST00000252622 FABP4P15090 132 aa15.38■□□□□ 0.05
LSM7-201ENST00000252622 COX17Q14061 63 aa15.38■□□□□ 0.05
LSM7-201ENST00000252622 LBHQ53QV2 105 aaPredicted RBP15.38■□□□□ 0.05
LSM7-201ENST00000252622 IGLV7-43P04211 117 aa15.37■□□□□ 0.05
LSM7-201ENST00000252622 PFN2P35080 140 aa15.37■□□□□ 0.05
LSM7-201ENST00000252622 MT1HL1P0DM35 61 aa15.36■□□□□ 0.05
LSM7-201ENST00000252622 REG3GQ6UW15 175 aa15.36■□□□□ 0.05
LSM7-201ENST00000252622 IGLV5-37A0A075B6J1 123 aa15.34■□□□□ 0.05
LSM7-201ENST00000252622 PLNP26678 52 aa15.34■□□□□ 0.05
LSM7-201ENST00000252622 MRPL55Q7Z7F7 128 aaKnown RBP15.34■□□□□ 0.05
LSM7-201ENST00000252622 LINC01600Q96MT4 127 aa15.33■□□□□ 0.04
LSM7-201ENST00000252622 TNXBP22105 4242 aa15.33■□□□□ 0.04
LSM7-201ENST00000252622 MAP1LC3CQ9BXW4 147 aa15.31■□□□□ 0.04
LSM7-201ENST00000252622 SND1-IT1Q9HBX3 110 aa15.31■□□□□ 0.04
LSM7-201ENST00000252622 DPM2O94777 84 aa15.3■□□□□ 0.04
LSM7-201ENST00000252622 NKAPP1Q8N9T2 125 aa15.28■□□□□ 0.04
LSM7-201ENST00000252622 DIRC1Q969H9 104 aa15.28■□□□□ 0.04
LSM7-201ENST00000252622 LINC00167Q96N53 147 aa15.27■□□□□ 0.04
LSM7-201ENST00000252622 IGKCP01834 107 aa15.26■□□□□ 0.03
LSM7-201ENST00000252622 HERV-K104P63124 156 aa15.26■□□□□ 0.03
LSM7-201ENST00000252622 PMCHL2Q9BQD1 86 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms