RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 A0A1W2PRX2 142 aa13□□□□□ -0.33
PTPN12-201ENST00000248594 K7EQG2 157 aa13□□□□□ -0.33
PTPN12-201ENST00000248594 H7BZZ5 65 aa12.99□□□□□ -0.33
PTPN12-201ENST00000248594 CLPSL2Q6UWE3 100 aa12.99□□□□□ -0.33
PTPN12-201ENST00000248594 IGHV4-61A0A0C4DH41 118 aa12.98□□□□□ -0.33
PTPN12-201ENST00000248594 IGLV5-45A0A087WSX0 123 aa12.98□□□□□ -0.33
PTPN12-201ENST00000248594 C6orf226Q5I0X4 101 aa12.98□□□□□ -0.33
PTPN12-201ENST00000248594 A8MTW9 85 aa12.97□□□□□ -0.33
PTPN12-201ENST00000248594 PF4P02776 101 aa12.96□□□□□ -0.33
PTPN12-201ENST00000248594 DAD1P61803 113 aa12.96□□□□□ -0.33
PTPN12-201ENST00000248594 FP248Q71RG6 208 aaPredicted RBP12.96□□□□□ -0.33
PTPN12-201ENST00000248594 LMO4P61968 165 aa12.96□□□□□ -0.33
PTPN12-201ENST00000248594 LRCOL1A6NCL2 159 aa12.95□□□□□ -0.34
PTPN12-201ENST00000248594 LYPD5Q6UWN5 251 aa12.95□□□□□ -0.34
PTPN12-201ENST00000248594 AVPP01185 164 aa12.94□□□□□ -0.34
PTPN12-201ENST00000248594 PRB2P02812 416 aaPredicted RBP12.94□□□□□ -0.34
PTPN12-201ENST00000248594 NTM-AS1Q6ZSK4 140 aa12.94□□□□□ -0.34
PTPN12-201ENST00000248594 SMIM26A0A096LP01 95 aa12.94□□□□□ -0.34
PTPN12-201ENST00000248594 C11orf71Q6IPW1 123 aa12.94□□□□□ -0.34
PTPN12-201ENST00000248594 TRBV7-6A0A0J9YX20 115 aa12.94□□□□□ -0.34
PTPN12-201ENST00000248594 LOC100131303A0A0U1RQF7 123 aa12.94□□□□□ -0.34
PTPN12-201ENST00000248594 M0R2N4 97 aa12.93□□□□□ -0.34
PTPN12-201ENST00000248594 CDC42SE2Q9NRR3 84 aa12.93□□□□□ -0.34
PTPN12-201ENST00000248594 IGSF10Q6WRI0 2623 aa12.92□□□□□ -0.34
PTPN12-201ENST00000248594 AKAP9Q99996 3911 aa12.92□□□□□ -0.34
PTPN12-201ENST00000248594 DOPEY1Q5JWR5 2465 aa12.91□□□□□ -0.34
PTPN12-201ENST00000248594 NDUFC2-KCTD14E9PQ53 114 aa12.91□□□□□ -0.34
PTPN12-201ENST00000248594 IGHV4-59P01825 116 aa12.9□□□□□ -0.35
PTPN12-201ENST00000248594 GNLYP22749 145 aa12.89□□□□□ -0.35
PTPN12-201ENST00000248594 SLURP1P55000 103 aa12.89□□□□□ -0.35
PTPN12-201ENST00000248594 TRAV7A0A075B6U4 112 aa12.89□□□□□ -0.35
PTPN12-201ENST00000248594 K7EMT4 169 aa12.89□□□□□ -0.35
PTPN12-201ENST00000248594 C18orf65Q6ZTR6 163 aa12.89□□□□□ -0.35
PTPN12-201ENST00000248594 TM2D3Q9BRN9 247 aa12.89□□□□□ -0.35
PTPN12-201ENST00000248594 JMJD7-PLA2G4BH0Y9G9 81 aa12.88□□□□□ -0.35
PTPN12-201ENST00000248594 KLK9Q2XQG4 91 aa12.88□□□□□ -0.35
PTPN12-201ENST00000248594 TRGV2A0A075B6R0 118 aa12.87□□□□□ -0.35
PTPN12-201ENST00000248594 IGHV4-30-2A0A087WSY4 118 aa12.87□□□□□ -0.35
PTPN12-201ENST00000248594 C6orf99Q4VX62 202 aa12.86□□□□□ -0.35
PTPN12-201ENST00000248594 IGLV4-60A0A075B6I1 120 aa12.86□□□□□ -0.35
PTPN12-201ENST00000248594 A0A087WZ39 114 aa12.86□□□□□ -0.35
PTPN12-201ENST00000248594 Q8N3U1 123 aa12.86□□□□□ -0.35
PTPN12-201ENST00000248594 LINC00482Q8N8I6 264 aa12.85□□□□□ -0.35
PTPN12-201ENST00000248594 OBSCN-AS1Q96MR7 158 aa12.85□□□□□ -0.35
PTPN12-201ENST00000248594 Q8N814 137 aa12.85□□□□□ -0.35
PTPN12-201ENST00000248594 Q8N9L7 120 aa12.85□□□□□ -0.35
PTPN12-201ENST00000248594 TMEM256-PLSCR3K7ERE1 68 aa12.85□□□□□ -0.35
PTPN12-201ENST00000248594 LINC01547P58512 204 aaPredicted RBP12.85□□□□□ -0.35
PTPN12-201ENST00000248594 ZNF843Q8N446 348 aa12.85□□□□□ -0.35
PTPN12-201ENST00000248594 DYNLRB2Q8TF09 96 aa12.85□□□□□ -0.35
PTPN12-201ENST00000248594 NOP10Q9NPE3 64 aaKnown RBP12.85□□□□□ -0.35
PTPN12-201ENST00000248594 RETNQ9HD89 108 aa12.84□□□□□ -0.35
PTPN12-201ENST00000248594 APCP25054 2843 aa12.84□□□□□ -0.35
PTPN12-201ENST00000248594 SETXQ7Z333 2677 aaKnown RBP12.83□□□□□ -0.36
PTPN12-201ENST00000248594 K7EQD1 137 aa12.83□□□□□ -0.36
PTPN12-201ENST00000248594 FAM229BQ4G0N7 80 aa12.83□□□□□ -0.36
PTPN12-201ENST00000248594 ATP5EP2Q5VTU8 51 aa12.83□□□□□ -0.36
PTPN12-201ENST00000248594 A0A096LPF7 62 aa12.83□□□□□ -0.36
PTPN12-201ENST00000248594 TRBV6-4A0A1B0GX49 114 aa12.83□□□□□ -0.36
PTPN12-201ENST00000248594 IGLV1-40P01703 118 aa12.82□□□□□ -0.36
PTPN12-201ENST00000248594 C16orf95Q9H693 158 aa12.82□□□□□ -0.36
PTPN12-201ENST00000248594 INSP01308 110 aa12.82□□□□□ -0.36
PTPN12-201ENST00000248594 PLA2G2AP14555 144 aa12.82□□□□□ -0.36
PTPN12-201ENST00000248594 C9orf116Q5BN46 136 aaPredicted RBP12.82□□□□□ -0.36
PTPN12-201ENST00000248594 FLNAP21333 2647 aaKnown RBP12.82□□□□□ -0.36
PTPN12-201ENST00000248594 TRBV10-1A0A0K0K1A3 114 aa12.82□□□□□ -0.36
PTPN12-201ENST00000248594 Q6ZVQ6 151 aa12.81□□□□□ -0.36
PTPN12-201ENST00000248594 A6NDX4 124 aa12.8□□□□□ -0.36
PTPN12-201ENST00000248594 CR1P17927 2039 aa12.8□□□□□ -0.36
PTPN12-201ENST00000248594 H3BUA1 57 aa12.8□□□□□ -0.36
PTPN12-201ENST00000248594 ITPR3Q14573 2671 aa12.8□□□□□ -0.36
PTPN12-201ENST00000248594 MIFP14174 115 aa12.79□□□□□ -0.36
PTPN12-201ENST00000248594 IGLV10-54A0A075B6I4 117 aa12.79□□□□□ -0.36
PTPN12-201ENST00000248594 TRGV4A0A0C4DH28 118 aa12.79□□□□□ -0.36
PTPN12-201ENST00000248594 SPATA3Q8NHX4 192 aa12.78□□□□□ -0.36
PTPN12-201ENST00000248594 IBA57-AS1B1ANH7 110 aa12.78□□□□□ -0.36
PTPN12-201ENST00000248594 CCL19Q99731 98 aa12.78□□□□□ -0.36
PTPN12-201ENST00000248594 DEFB112Q30KQ8 113 aa12.78□□□□□ -0.36
PTPN12-201ENST00000248594 USP24Q9UPU5 2620 aa12.75□□□□□ -0.37
PTPN12-201ENST00000248594 STHQ8IWL8 128 aa12.75□□□□□ -0.37
PTPN12-201ENST00000248594 A0A096LNT2 108 aa12.75□□□□□ -0.37
PTPN12-201ENST00000248594 ZNF469Q96JG9 3925 aaPredicted RBP12.75□□□□□ -0.37
PTPN12-201ENST00000248594 KLKP1Q107X0 134 aa12.74□□□□□ -0.37
PTPN12-201ENST00000248594 Q6ZQY7 126 aa12.74□□□□□ -0.37
PTPN12-201ENST00000248594 NREPQ16612 68 aa12.74□□□□□ -0.37
PTPN12-201ENST00000248594 MAP6D1Q9H9H5 199 aa12.74□□□□□ -0.37
PTPN12-201ENST00000248594 TMEM89A2RUT3 159 aa12.73□□□□□ -0.37
PTPN12-201ENST00000248594 PRR4Q16378 134 aa12.73□□□□□ -0.37
PTPN12-201ENST00000248594 FBXL19-AS1Q494R0 122 aa12.73□□□□□ -0.37
PTPN12-201ENST00000248594 LINC00269Q8N2A0 174 aa12.72□□□□□ -0.37
PTPN12-201ENST00000248594 TMEM254Q8TBM7 123 aa12.72□□□□□ -0.37
PTPN12-201ENST00000248594 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.71□□□□□ -0.37
PTPN12-201ENST00000248594 IGHV3OR16-9A0A0B4J2B5 98 aa12.71□□□□□ -0.37
PTPN12-201ENST00000248594 F8P00451 2351 aa12.71□□□□□ -0.38
PTPN12-201ENST00000248594 Q6ZQT0 140 aa12.7□□□□□ -0.38
PTPN12-201ENST00000248594 DEFB130BP0DP73 79 aa12.69□□□□□ -0.38
PTPN12-201ENST00000248594 DEFB130AP0DP74 79 aa12.69□□□□□ -0.38
PTPN12-201ENST00000248594 NANOS2P60321 138 aaKnown RBP12.69□□□□□ -0.38
PTPN12-201ENST00000248594 MSMBP08118 114 aa12.68□□□□□ -0.38
PTPN12-201ENST00000248594 PSPHP1O15172 72 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms