RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 A0A096LPF7 62 aa11.15□□□□□ -0.63
UBE3D-201ENST00000237186 Q8IZM0 81 aa11.15□□□□□ -0.63
UBE3D-201ENST00000237186 IGHV4-30-4P0DP06 118 aa11.14□□□□□ -0.63
UBE3D-201ENST00000237186 XCL1P47992 114 aa11.14□□□□□ -0.63
UBE3D-201ENST00000237186 LINC00158P58513 81 aa11.14□□□□□ -0.63
UBE3D-201ENST00000237186 KRTAP24-1Q3LI83 254 aa11.14□□□□□ -0.63
UBE3D-201ENST00000237186 C6orf226Q5I0X4 101 aa11.14□□□□□ -0.63
UBE3D-201ENST00000237186 CELA1Q9UNI1 258 aa11.14□□□□□ -0.63
UBE3D-201ENST00000237186 SND1-IT1Q9HBX3 110 aa11.13□□□□□ -0.63
UBE3D-201ENST00000237186 IGKV2-28A0A075B6P5 120 aa11.12□□□□□ -0.63
UBE3D-201ENST00000237186 IGKV2D-28P01615 120 aa11.12□□□□□ -0.63
UBE3D-201ENST00000237186 RPL28P46779 137 aaKnown RBP11.12□□□□□ -0.63
UBE3D-201ENST00000237186 CCL18P55774 89 aa11.12□□□□□ -0.63
UBE3D-201ENST00000237186 MRPL23Q16540 153 aaKnown RBP11.12□□□□□ -0.63
UBE3D-201ENST00000237186 CD164L2Q6UWJ8 174 aa11.12□□□□□ -0.63
UBE3D-201ENST00000237186 UBE2WQ96B02 151 aa11.12□□□□□ -0.63
UBE3D-201ENST00000237186 TEX49A0A1B0GTD5 131 aa11.11□□□□□ -0.63
UBE3D-201ENST00000237186 LINC00269Q8N2A0 174 aa11.11□□□□□ -0.63
UBE3D-201ENST00000237186 LINC00337Q8N6G1 96 aa11.11□□□□□ -0.63
UBE3D-201ENST00000237186 TRACP01848 142 aa11.1□□□□□ -0.63
UBE3D-201ENST00000237186 CRPP02741 224 aa11.1□□□□□ -0.63
UBE3D-201ENST00000237186 DEFB121Q5J5C9 76 aa11.1□□□□□ -0.63
UBE3D-201ENST00000237186 LELP1Q5T871 98 aa11.09□□□□□ -0.63
UBE3D-201ENST00000237186 REG3AQ06141 175 aa11.08□□□□□ -0.64
UBE3D-201ENST00000237186 KIAA0087Q14695 138 aa11.08□□□□□ -0.64
UBE3D-201ENST00000237186 CLPSL2Q6UWE3 100 aa11.08□□□□□ -0.64
UBE3D-201ENST00000237186 XGP55808 180 aa11.08□□□□□ -0.64
UBE3D-201ENST00000237186 CHCHD10Q8WYQ3 142 aaPredicted RBP11.08□□□□□ -0.64
UBE3D-201ENST00000237186 PFN2P35080 140 aa11.07□□□□□ -0.64
UBE3D-201ENST00000237186 CXCL5P42830 114 aa11.07□□□□□ -0.64
UBE3D-201ENST00000237186 ANGP03950 147 aaKnown RBP11.06□□□□□ -0.64
UBE3D-201ENST00000237186 MT-ATP8P03928 68 aa11.06□□□□□ -0.64
UBE3D-201ENST00000237186 COX17Q14061 63 aa11.05□□□□□ -0.64
UBE3D-201ENST00000237186 Q8N3U1 123 aa11.04□□□□□ -0.64
UBE3D-201ENST00000237186 C3orf56Q8N813 242 aa11.04□□□□□ -0.64
UBE3D-201ENST00000237186 CKS1BP61024 79 aa11.04□□□□□ -0.64
UBE3D-201ENST00000237186 SMIM11BQ8TCY0 68 aa11.04□□□□□ -0.64
UBE3D-201ENST00000237186 FAM218AQ96MZ4 157 aa11.04□□□□□ -0.64
UBE3D-201ENST00000237186 TRAV8-4A0A0B4J246 113 aa11.03□□□□□ -0.64
UBE3D-201ENST00000237186 H0YGX0 51 aa11.03□□□□□ -0.64
UBE3D-201ENST00000237186 PRR34Q9NV39 138 aa11.03□□□□□ -0.64
UBE3D-201ENST00000237186 FAM240AA0A1B0GVK7 77 aa11.02□□□□□ -0.64
UBE3D-201ENST00000237186 H3BNG1 76 aa11.02□□□□□ -0.65
UBE3D-201ENST00000237186 HTN3P15516 51 aa11.02□□□□□ -0.65
UBE3D-201ENST00000237186 MALP21145 153 aa11.02□□□□□ -0.65
UBE3D-201ENST00000237186 EGFEM1PQ0D2K5 195 aa11.02□□□□□ -0.65
UBE3D-201ENST00000237186 CFAP161Q6P656 301 aa11.02□□□□□ -0.65
UBE3D-201ENST00000237186 C11orf68Q9H3H3 251 aaKnown RBP11.02□□□□□ -0.65
UBE3D-201ENST00000237186 KLK5Q9Y337 293 aaPredicted RBP11.02□□□□□ -0.65
UBE3D-201ENST00000237186 FBN1P35555 2871 aaKnown RBP11.01□□□□□ -0.65
UBE3D-201ENST00000237186 IGLV10-54A0A075B6I4 117 aa11.01□□□□□ -0.65
UBE3D-201ENST00000237186 KRTAP10-11P60412 298 aa11.01□□□□□ -0.65
UBE3D-201ENST00000237186 OXLD1Q5BKU9 147 aa11.01□□□□□ -0.65
UBE3D-201ENST00000237186 NDUFC2O95298 119 aa11□□□□□ -0.65
UBE3D-201ENST00000237186 BAALC-AS2P0C853 105 aa11□□□□□ -0.65
UBE3D-201ENST00000237186 LYPD5Q6UWN5 251 aa11□□□□□ -0.65
UBE3D-201ENST00000237186 C22orf24Q9Y442 160 aa10.99□□□□□ -0.65
UBE3D-201ENST00000237186 CMYA5Q8N3K9 4069 aa10.98□□□□□ -0.65
UBE3D-201ENST00000237186 MUC7Q8TAX7 377 aa10.98□□□□□ -0.65
UBE3D-201ENST00000237186 ENHOQ6UWT2 76 aa10.96□□□□□ -0.65
UBE3D-201ENST00000237186 STAB1Q9NY15 2570 aa10.96□□□□□ -0.65
UBE3D-201ENST00000237186 A0A0J9YWU9 116 aa10.95□□□□□ -0.66
UBE3D-201ENST00000237186 KLK12Q9UKR0 248 aa10.95□□□□□ -0.66
UBE3D-201ENST00000237186 ACYP1P07311 99 aa10.95□□□□□ -0.66
UBE3D-201ENST00000237186 OR13C6PQ8NH95 151 aa10.95□□□□□ -0.66
UBE3D-201ENST00000237186 A0A087WYN8 130 aa10.94□□□□□ -0.66
UBE3D-201ENST00000237186 DNAH3Q8TD57 4116 aa10.94□□□□□ -0.66
UBE3D-201ENST00000237186 ANK2Q01484 3957 aa10.93□□□□□ -0.66
UBE3D-201ENST00000237186 MAST4O15021 2626 aa10.93□□□□□ -0.66
UBE3D-201ENST00000237186 SNCGO76070 127 aa10.93□□□□□ -0.66
UBE3D-201ENST00000237186 SPAG11BQ08648 103 aa10.93□□□□□ -0.66
UBE3D-201ENST00000237186 KPRPQ5T749 579 aaPredicted RBP10.93□□□□□ -0.66
UBE3D-201ENST00000237186 Q9HAA7 133 aa10.93□□□□□ -0.66
UBE3D-201ENST00000237186 GVQW2A0A096LPI5 108 aaPredicted RBP10.92□□□□□ -0.66
UBE3D-201ENST00000237186 DNAL4O96015 105 aa10.92□□□□□ -0.66
UBE3D-201ENST00000237186 NANOS2P60321 138 aaKnown RBP10.92□□□□□ -0.66
UBE3D-201ENST00000237186 Q6Q795 121 aa10.92□□□□□ -0.66
UBE3D-201ENST00000237186 C15orf53Q8NAA6 179 aa10.92□□□□□ -0.66
UBE3D-201ENST00000237186 RETNQ9HD89 108 aa10.92□□□□□ -0.66
UBE3D-201ENST00000237186 A0A1B0GX51 115 aa10.91□□□□□ -0.66
UBE3D-201ENST00000237186 C9orf116Q5BN46 136 aaPredicted RBP10.91□□□□□ -0.66
UBE3D-201ENST00000237186 TMEM126AQ9H061 195 aa10.91□□□□□ -0.66
UBE3D-201ENST00000237186 INAFM2P0DMQ5 153 aa10.91□□□□□ -0.66
UBE3D-201ENST00000237186 C10orf25Q5T742 122 aa10.9□□□□□ -0.66
UBE3D-201ENST00000237186 UNQ6190/PRO20217Q6UXQ8 127 aa10.9□□□□□ -0.66
UBE3D-201ENST00000237186 Q6ZTC4 211 aa10.9□□□□□ -0.66
UBE3D-201ENST00000237186 A0A1B0GV72 72 aa10.89□□□□□ -0.67
UBE3D-201ENST00000237186 PRR3P79522 188 aaKnown RBP10.89□□□□□ -0.67
UBE3D-201ENST00000237186 C6orf223Q8N319 242 aa10.89□□□□□ -0.67
UBE3D-201ENST00000237186 GAGE2BQ13066 116 aa10.89□□□□□ -0.67
UBE3D-201ENST00000237186 GAGE2EQ4V326 116 aa10.89□□□□□ -0.67
UBE3D-201ENST00000237186 LINC00167Q96N53 147 aa10.89□□□□□ -0.67
UBE3D-201ENST00000237186 GAGE2DQ9UEU5 116 aa10.89□□□□□ -0.67
UBE3D-201ENST00000237186 LECT2O14960 151 aa10.88□□□□□ -0.67
UBE3D-201ENST00000237186 OBSCN-AS1Q96MR7 158 aa10.88□□□□□ -0.67
UBE3D-201ENST00000237186 COL6A5A8TX70 2615 aa10.88□□□□□ -0.67
UBE3D-201ENST00000237186 SDIM1Q6ZPB5 146 aa10.87□□□□□ -0.67
UBE3D-201ENST00000237186 WFDC10BQ8IUB3 73 aa10.87□□□□□ -0.67
UBE3D-201ENST00000237186 KRTAP26-1Q6PEX3 210 aa10.86□□□□□ -0.67
UBE3D-201ENST00000237186 Q8NDZ9 215 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms