RNA–Protein interactions for RNA: ENST00000229268.12

USP5-201, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP5, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-201ENST00000229268 CFC1BP0CG36 223 aa9.23□□□□□ -0.93
USP5-201ENST00000229268 CFC1P0CG37 223 aa9.23□□□□□ -0.93
USP5-201ENST00000229268 SCGB1C2P0DMR2 95 aa9.23□□□□□ -0.93
USP5-201ENST00000229268 PFN2P35080 140 aa9.23□□□□□ -0.93
USP5-201ENST00000229268 KPRPQ5T749 579 aaPredicted RBP9.23□□□□□ -0.93
USP5-201ENST00000229268 PPDPFLQ8WWR9 84 aa9.23□□□□□ -0.93
USP5-201ENST00000229268 TEN1Q86WV5 123 aa9.22□□□□□ -0.93
USP5-201ENST00000229268 C11orf45Q8TAV5 145 aa9.22□□□□□ -0.93
USP5-201ENST00000229268 SS18Q15532 418 aa9.21□□□□□ -0.94
USP5-201ENST00000229268 C2orf82Q6UX34 121 aa9.21□□□□□ -0.94
USP5-201ENST00000229268 DEFB131BA0A096LNP1 70 aa9.2□□□□□ -0.94
USP5-201ENST00000229268 K7EIL1 84 aa9.2□□□□□ -0.94
USP5-201ENST00000229268 C6orf226Q5I0X4 101 aa9.2□□□□□ -0.94
USP5-201ENST00000229268 IGLV5-45A0A087WSX0 123 aa9.2□□□□□ -0.94
USP5-201ENST00000229268 REG3AQ06141 175 aa9.2□□□□□ -0.94
USP5-201ENST00000229268 UBE2WQ96B02 151 aa9.2□□□□□ -0.94
USP5-201ENST00000229268 IGHV3OR16-9A0A0B4J2B5 98 aa9.19□□□□□ -0.94
USP5-201ENST00000229268 H7C423 109 aa9.19□□□□□ -0.94
USP5-201ENST00000229268 NDUFV3P56181 108 aaKnown RBP9.19□□□□□ -0.94
USP5-201ENST00000229268 GAGE2BQ13066 116 aa9.19□□□□□ -0.94
USP5-201ENST00000229268 GAGE2EQ4V326 116 aa9.19□□□□□ -0.94
USP5-201ENST00000229268 COX7B2Q8TF08 81 aa9.19□□□□□ -0.94
USP5-201ENST00000229268 LITAFQ99732 161 aa9.19□□□□□ -0.94
USP5-201ENST00000229268 GAGE2DQ9UEU5 116 aa9.19□□□□□ -0.94
USP5-201ENST00000229268 C9JAW5 83 aa9.19□□□□□ -0.94
USP5-201ENST00000229268 LINC00158P58513 81 aa9.19□□□□□ -0.94
USP5-201ENST00000229268 CIRBPQ14011 172 aaKnown RBP9.19□□□□□ -0.94
USP5-201ENST00000229268 WFDC10BQ8IUB3 73 aa9.19□□□□□ -0.94
USP5-201ENST00000229268 MALP21145 153 aa9.18□□□□□ -0.94
USP5-201ENST00000229268 CHCHD10Q8WYQ3 142 aaPredicted RBP9.18□□□□□ -0.94
USP5-201ENST00000229268 COL7A1Q02388 2944 aa9.18□□□□□ -0.94
USP5-201ENST00000229268 IGLV5-39A0A0G2JS06 123 aa9.18□□□□□ -0.94
USP5-201ENST00000229268 LYPD5Q6UWN5 251 aa9.18□□□□□ -0.94
USP5-201ENST00000229268 PRO1854Q9UHT4 67 aa9.18□□□□□ -0.94
USP5-201ENST00000229268 NDUFA1O15239 70 aa9.17□□□□□ -0.94
USP5-201ENST00000229268 TTC32Q5I0X7 151 aa9.17□□□□□ -0.94
USP5-201ENST00000229268 SNCGO76070 127 aa9.16□□□□□ -0.94
USP5-201ENST00000229268 MIAQ16674 131 aa9.16□□□□□ -0.94
USP5-201ENST00000229268 TEX49A0A1B0GTD5 131 aa9.15□□□□□ -0.94
USP5-201ENST00000229268 NTN5Q8WTR8 489 aaPredicted RBP9.15□□□□□ -0.94
USP5-201ENST00000229268 A0A1B0GUV1 79 aa9.15□□□□□ -0.95
USP5-201ENST00000229268 SLC25A20O43772 301 aa9.15□□□□□ -0.95
USP5-201ENST00000229268 LELP1Q5T871 98 aa9.15□□□□□ -0.95
USP5-201ENST00000229268 MIR7-3HGQ8N6C7 128 aa9.15□□□□□ -0.95
USP5-201ENST00000229268 ESRGQ1W209 222 aa9.14□□□□□ -0.95
USP5-201ENST00000229268 C9orf116Q5BN46 136 aaPredicted RBP9.14□□□□□ -0.95
USP5-201ENST00000229268 A0A087WZ39 114 aa9.14□□□□□ -0.95
USP5-201ENST00000229268 IFITM1P13164 125 aa9.14□□□□□ -0.95
USP5-201ENST00000229268 SOSTDC1Q6X4U4 206 aa9.14□□□□□ -0.95
USP5-201ENST00000229268 Q9HAA7 133 aa9.14□□□□□ -0.95
USP5-201ENST00000229268 LINC00308Q8TCZ7 52 aa9.13□□□□□ -0.95
USP5-201ENST00000229268 COX7A2LO14548 114 aa9.13□□□□□ -0.95
USP5-201ENST00000229268 CRPP02741 224 aa9.13□□□□□ -0.95
USP5-201ENST00000229268 PPDPFQ9H3Y8 114 aa9.13□□□□□ -0.95
USP5-201ENST00000229268 C6orf223Q8N319 242 aa9.12□□□□□ -0.95
USP5-201ENST00000229268 C15orf53Q8NAA6 179 aa9.11□□□□□ -0.95
USP5-201ENST00000229268 RPL13AP40429 203 aaKnown RBP9.11□□□□□ -0.95
USP5-201ENST00000229268 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.1□□□□□ -0.95
USP5-201ENST00000229268 FAM19A3Q7Z5A8 133 aa9.1□□□□□ -0.95
USP5-201ENST00000229268 CD164L2Q6UWJ8 174 aa9.1□□□□□ -0.95
USP5-201ENST00000229268 ENHOQ6UWT2 76 aa9.1□□□□□ -0.95
USP5-201ENST00000229268 SPANXDQ9BXN6 97 aa9.1□□□□□ -0.95
USP5-201ENST00000229268 SPANXCQ9NY87 97 aa9.1□□□□□ -0.95
USP5-201ENST00000229268 HIGD2BQ4VC39 106 aa9.09□□□□□ -0.95
USP5-201ENST00000229268 PRR3P79522 188 aaKnown RBP9.08□□□□□ -0.96
USP5-201ENST00000229268 OR13C6PQ8NH95 151 aa9.08□□□□□ -0.96
USP5-201ENST00000229268 CLEC2BQ92478 149 aa9.07□□□□□ -0.96
USP5-201ENST00000229268 IGKV2D-24A0A075B6R9 120 aa9.07□□□□□ -0.96
USP5-201ENST00000229268 TRIAP1O43715 76 aa9.07□□□□□ -0.96
USP5-201ENST00000229268 UNQ6190/PRO20217Q6UXQ8 127 aa9.07□□□□□ -0.96
USP5-201ENST00000229268 C10orf25Q5T742 122 aa9.06□□□□□ -0.96
USP5-201ENST00000229268 SND1-IT1Q9HBX3 110 aa9.06□□□□□ -0.96
USP5-201ENST00000229268 DNAH3Q8TD57 4116 aa9.06□□□□□ -0.96
USP5-201ENST00000229268 HUWE1Q7Z6Z7 4374 aaKnown RBP9.06□□□□□ -0.96
USP5-201ENST00000229268 A0A0B4J2C4 111 aa9.06□□□□□ -0.96
USP5-201ENST00000229268 TRAV8-4A0A0B4J246 113 aa9.05□□□□□ -0.96
USP5-201ENST00000229268 LOC107984640A0A0U1RRK4 108 aa9.05□□□□□ -0.96
USP5-201ENST00000229268 M0QXV9 152 aa9.05□□□□□ -0.96
USP5-201ENST00000229268 SPAG11BQ08648 103 aa9.05□□□□□ -0.96
USP5-201ENST00000229268 DNHD1Q96M86 4753 aa9.05□□□□□ -0.96
USP5-201ENST00000229268 TM2D3Q9BRN9 247 aa9.05□□□□□ -0.96
USP5-201ENST00000229268 CCL18P55774 89 aa9.04□□□□□ -0.96
USP5-201ENST00000229268 LYSTQ99698 3801 aa9.04□□□□□ -0.96
USP5-201ENST00000229268 TIMM17BO60830 172 aa9.04□□□□□ -0.96
USP5-201ENST00000229268 LYRM7Q5U5X0 104 aa9.04□□□□□ -0.96
USP5-201ENST00000229268 TGP01266 2768 aa9.03□□□□□ -0.96
USP5-201ENST00000229268 KLK5Q9Y337 293 aaPredicted RBP9.03□□□□□ -0.96
USP5-201ENST00000229268 TRAV10A0A0B4J240 114 aa9.02□□□□□ -0.96
USP5-201ENST00000229268 LECT2O14960 151 aa9.02□□□□□ -0.96
USP5-201ENST00000229268 CSMD3Q7Z407 3707 aa9.02□□□□□ -0.97
USP5-201ENST00000229268 LINC01620Q4KN68 170 aa9.02□□□□□ -0.97
USP5-201ENST00000229268 Q8IZM0 81 aa9.02□□□□□ -0.97
USP5-201ENST00000229268 KIAA0087Q14695 138 aa9.01□□□□□ -0.97
USP5-201ENST00000229268 IBA57-AS1B1ANH7 110 aa9□□□□□ -0.97
USP5-201ENST00000229268 LINC00337Q8N6G1 96 aa9□□□□□ -0.97
USP5-201ENST00000229268 C1orf43Q9BWL3 253 aa9□□□□□ -0.97
USP5-201ENST00000229268 XAGE1AQ9HD64 81 aa9□□□□□ -0.97
USP5-201ENST00000229268 COX6CP09669 75 aa9□□□□□ -0.97
USP5-201ENST00000229268 PRR34Q9NV39 138 aa9□□□□□ -0.97
USP5-201ENST00000229268 LINC00588Q9Y4M8 146 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms