RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 VAMP8Q9BV40 100 aa9.15□□□□□ -0.94
SEC61B-201ENST00000223641 SFTA2Q6UW10 78 aa9.14□□□□□ -0.95
SEC61B-201ENST00000223641 C2orf82Q6UX34 121 aa9.14□□□□□ -0.95
SEC61B-201ENST00000223641 NDUFA1O15239 70 aa9.13□□□□□ -0.95
SEC61B-201ENST00000223641 NMUP48645 174 aa9.13□□□□□ -0.95
SEC61B-201ENST00000223641 C10orf25Q5T742 122 aa9.13□□□□□ -0.95
SEC61B-201ENST00000223641 UNQ6190/PRO20217Q6UXQ8 127 aa9.13□□□□□ -0.95
SEC61B-201ENST00000223641 PAM16Q9Y3D7 125 aa9.13□□□□□ -0.95
SEC61B-201ENST00000223641 EREGO14944 169 aa9.12□□□□□ -0.95
SEC61B-201ENST00000223641 LGALS3P17931 250 aaKnown RBP9.12□□□□□ -0.95
SEC61B-201ENST00000223641 CKS1BP61024 79 aa9.12□□□□□ -0.95
SEC61B-201ENST00000223641 SYCNQ0VAF6 134 aa9.12□□□□□ -0.95
SEC61B-201ENST00000223641 SPATA45Q537H7 98 aa9.12□□□□□ -0.95
SEC61B-201ENST00000223641 Q6ZRU5 148 aa9.12□□□□□ -0.95
SEC61B-201ENST00000223641 CAMK2N2Q96S95 79 aa9.12□□□□□ -0.95
SEC61B-201ENST00000223641 NDUFA12Q9UI09 145 aa9.12□□□□□ -0.95
SEC61B-201ENST00000223641 TRBV30A0A0K0K1B3 111 aa9.11□□□□□ -0.95
SEC61B-201ENST00000223641 RNF151Q2KHN1 245 aa9.11□□□□□ -0.95
SEC61B-201ENST00000223641 PCP2Q8IVA1 136 aa9.11□□□□□ -0.95
SEC61B-201ENST00000223641 TTTY13Q9BZ97 58 aa9.11□□□□□ -0.95
SEC61B-201ENST00000223641 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.1□□□□□ -0.95
SEC61B-201ENST00000223641 MYMXA0A1B0GTQ4 84 aa9.1□□□□□ -0.95
SEC61B-201ENST00000223641 HERV-K104P63124 156 aa9.1□□□□□ -0.95
SEC61B-201ENST00000223641 S100A12P80511 92 aa9.1□□□□□ -0.95
SEC61B-201ENST00000223641 C9orf163Q8N9P6 203 aa9.1□□□□□ -0.95
SEC61B-201ENST00000223641 C6orf48Q9UBA6 75 aa9.1□□□□□ -0.95
SEC61B-201ENST00000223641 COX8AP10176 69 aa9.09□□□□□ -0.95
SEC61B-201ENST00000223641 BOD1L2Q8IYS8 172 aa9.09□□□□□ -0.95
SEC61B-201ENST00000223641 CARD19Q96LW7 228 aa9.09□□□□□ -0.95
SEC61B-201ENST00000223641 DNAH5Q8TE73 4624 aa9.09□□□□□ -0.95
SEC61B-201ENST00000223641 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.08□□□□□ -0.96
SEC61B-201ENST00000223641 A0A1B0GVY2 172 aa9.08□□□□□ -0.96
SEC61B-201ENST00000223641 ZNF815PA8K554 130 aa9.08□□□□□ -0.96
SEC61B-201ENST00000223641 DLEU1O43261 78 aa9.08□□□□□ -0.96
SEC61B-201ENST00000223641 LINC00518Q8N0U6 118 aa9.08□□□□□ -0.96
SEC61B-201ENST00000223641 C12orf57Q99622 126 aa9.08□□□□□ -0.96
SEC61B-201ENST00000223641 A0A0J9YXY3 114 aa9.07□□□□□ -0.96
SEC61B-201ENST00000223641 KRTAP10-2P60368 255 aa9.07□□□□□ -0.96
SEC61B-201ENST00000223641 PGPEP1Q9NXJ5 209 aa9.07□□□□□ -0.96
SEC61B-201ENST00000223641 TLX1NBP0CAT3 122 aa9.06□□□□□ -0.96
SEC61B-201ENST00000223641 COX17Q14061 63 aa9.06□□□□□ -0.96
SEC61B-201ENST00000223641 C9orf116Q5BN46 136 aaPredicted RBP9.06□□□□□ -0.96
SEC61B-201ENST00000223641 C14orf144Q96I85 54 aa9.06□□□□□ -0.96
SEC61B-201ENST00000223641 LINC00587B1AMM8 73 aa9.05□□□□□ -0.96
SEC61B-201ENST00000223641 ERG28Q9UKR5 140 aa9.05□□□□□ -0.96
SEC61B-201ENST00000223641 IGLV5-52A0A0A0MRZ9 124 aa9.04□□□□□ -0.96
SEC61B-201ENST00000223641 NDUFC2-KCTD14E9PQ53 114 aa9.03□□□□□ -0.96
SEC61B-201ENST00000223641 TIMM17BO60830 172 aa9.03□□□□□ -0.96
SEC61B-201ENST00000223641 FUSP35637 526 aaKnown RBP eCLIP9.03□□□□□ -0.96
SEC61B-201ENST00000223641 SLC25A34Q6PIV7 304 aa9.03□□□□□ -0.96
SEC61B-201ENST00000223641 SDIM1Q6ZPB5 146 aa9.03□□□□□ -0.96
SEC61B-201ENST00000223641 LITAFQ99732 161 aa9.03□□□□□ -0.96
SEC61B-201ENST00000223641 TP73-AS1Q9UF72 201 aa9.03□□□□□ -0.96
SEC61B-201ENST00000223641 SMIM13P0DJ93 91 aa9.02□□□□□ -0.97
SEC61B-201ENST00000223641 LOC107984640A0A0U1RRK4 108 aa9.01□□□□□ -0.97
SEC61B-201ENST00000223641 PFN2P35080 140 aa9.01□□□□□ -0.97
SEC61B-201ENST00000223641 MEIG1Q5JSS6 88 aa9.01□□□□□ -0.97
SEC61B-201ENST00000223641 SCGB1D4Q6XE38 83 aa9.01□□□□□ -0.97
SEC61B-201ENST00000223641 Q6ZRP5 223 aa9.01□□□□□ -0.97
SEC61B-201ENST00000223641 DNAH8Q96JB1 4490 aa9.01□□□□□ -0.97
SEC61B-201ENST00000223641 CIRBPQ14011 172 aaKnown RBP9□□□□□ -0.97
SEC61B-201ENST00000223641 LINC01620Q4KN68 170 aa9□□□□□ -0.97
SEC61B-201ENST00000223641 ADAMTSL4-AS1Q5T5F5 129 aa9□□□□□ -0.97
SEC61B-201ENST00000223641 C2orf91Q6ZV80 131 aa9□□□□□ -0.97
SEC61B-201ENST00000223641 HIGD1BQ9P298 99 aa9□□□□□ -0.97
SEC61B-201ENST00000223641 PKIGQ9Y2B9 76 aa9□□□□□ -0.97
SEC61B-201ENST00000223641 C16orf90A8MZG2 172 aa8.99□□□□□ -0.97
SEC61B-201ENST00000223641 LINC00158P58513 81 aa8.99□□□□□ -0.97
SEC61B-201ENST00000223641 UQCR10Q9UDW1 63 aa8.99□□□□□ -0.97
SEC61B-201ENST00000223641 PKHD1P08F94 4074 aa8.98□□□□□ -0.97
SEC61B-201ENST00000223641 LOC107984156A0A0G2JMH3 177 aa8.98□□□□□ -0.97
SEC61B-201ENST00000223641 A0A0U1RRA0 63 aa8.98□□□□□ -0.97
SEC61B-201ENST00000223641 TMEM238C9JI98 176 aa8.98□□□□□ -0.97
SEC61B-201ENST00000223641 GCSHP23434 173 aa8.98□□□□□ -0.97
SEC61B-201ENST00000223641 ARL17AQ8IVW1 177 aa8.98□□□□□ -0.97
SEC61B-201ENST00000223641 MIR7-3HGQ8N6C7 128 aa8.98□□□□□ -0.97
SEC61B-201ENST00000223641 SPANXDQ9BXN6 97 aa8.98□□□□□ -0.97
SEC61B-201ENST00000223641 SPANXB1Q9NS25 103 aaPredicted RBP8.98□□□□□ -0.97
SEC61B-201ENST00000223641 SPANXCQ9NY87 97 aa8.98□□□□□ -0.97
SEC61B-201ENST00000223641 A0A096LNI7 61 aa8.97□□□□□ -0.97
SEC61B-201ENST00000223641 PTTG1IPP53801 180 aa8.97□□□□□ -0.97
SEC61B-201ENST00000223641 Q6ZVH6 145 aa8.97□□□□□ -0.97
SEC61B-201ENST00000223641 MIEN1Q9BRT3 115 aa8.97□□□□□ -0.97
SEC61B-201ENST00000223641 PRO1933Q9H354 126 aa8.97□□□□□ -0.97
SEC61B-201ENST00000223641 RPL18AQ02543 176 aaKnown RBP8.96□□□□□ -0.98
SEC61B-201ENST00000223641 DAND5Q8N907 189 aa8.96□□□□□ -0.98
SEC61B-201ENST00000223641 SND1-IT1Q9HBX3 110 aa8.96□□□□□ -0.98
SEC61B-201ENST00000223641 LRP1BQ9NZR2 4599 aa8.95□□□□□ -0.98
SEC61B-201ENST00000223641 KRTAP10-1P60331 282 aa8.95□□□□□ -0.98
SEC61B-201ENST00000223641 GAGE2EQ4V326 116 aa8.95□□□□□ -0.98
SEC61B-201ENST00000223641 C9orf129Q5T035 196 aaKnown RBP8.95□□□□□ -0.98
SEC61B-201ENST00000223641 PPDPFQ9H3Y8 114 aa8.95□□□□□ -0.98
SEC61B-201ENST00000223641 GAGE2DQ9UEU5 116 aa8.95□□□□□ -0.98
SEC61B-201ENST00000223641 DYNC1H1Q14204 4646 aaKnown RBP8.95□□□□□ -0.98
SEC61B-201ENST00000223641 TSTD3H0UI37 97 aa8.94□□□□□ -0.98
SEC61B-201ENST00000223641 PANO1I0J062 215 aa8.94□□□□□ -0.98
SEC61B-201ENST00000223641 EIF4EBP3O60516 100 aaPredicted RBP8.94□□□□□ -0.98
SEC61B-201ENST00000223641 GAGE2BQ13066 116 aa8.94□□□□□ -0.98
SEC61B-201ENST00000223641 Q6ZSA8 131 aa8.94□□□□□ -0.98
SEC61B-201ENST00000223641 XAGE1AQ9HD64 81 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms