RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 BEAN1Q3B7T3 259 aa13.08□□□□□ -0.32
CLIP2-201ENST00000223398 C20orf197Q8N268 126 aa13.07□□□□□ -0.32
CLIP2-201ENST00000223398 C2orf91Q6ZV80 131 aa13.07□□□□□ -0.32
CLIP2-201ENST00000223398 C10orf25Q5T742 122 aa13.07□□□□□ -0.32
CLIP2-201ENST00000223398 AGRNO00468 2067 aa13.06□□□□□ -0.32
CLIP2-201ENST00000223398 MT-ATP8P03928 68 aa13.05□□□□□ -0.32
CLIP2-201ENST00000223398 NDUFV3P56181 108 aaKnown RBP13.05□□□□□ -0.32
CLIP2-201ENST00000223398 URB1-AS1Q96HZ7 61 aa13.05□□□□□ -0.32
CLIP2-201ENST00000223398 MDFIQ99750 246 aa13.05□□□□□ -0.32
CLIP2-201ENST00000223398 LST1O00453 97 aa13.04□□□□□ -0.32
CLIP2-201ENST00000223398 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.03□□□□□ -0.32
CLIP2-201ENST00000223398 COL4A2P08572 1712 aa13.03□□□□□ -0.32
CLIP2-201ENST00000223398 TSPEAR-AS2P59090 65 aa13.02□□□□□ -0.33
CLIP2-201ENST00000223398 SBSPONQ8IVN8 264 aa13.01□□□□□ -0.33
CLIP2-201ENST00000223398 MUC7Q8TAX7 377 aa13.01□□□□□ -0.33
CLIP2-201ENST00000223398 ANKRD17O75179 2603 aaKnown RBP13.01□□□□□ -0.33
CLIP2-201ENST00000223398 FSHBP01225 129 aa13.01□□□□□ -0.33
CLIP2-201ENST00000223398 NDUFC2-KCTD14E9PQ53 114 aa13□□□□□ -0.33
CLIP2-201ENST00000223398 C3orf22Q8N5N4 141 aa13□□□□□ -0.33
CLIP2-201ENST00000223398 Q6ZRU5 148 aa12.99□□□□□ -0.33
CLIP2-201ENST00000223398 A0A1B0GUV1 79 aa12.98□□□□□ -0.33
CLIP2-201ENST00000223398 ATP5EP2Q5VTU8 51 aa12.98□□□□□ -0.33
CLIP2-201ENST00000223398 LINC00310P59036 64 aa12.97□□□□□ -0.33
CLIP2-201ENST00000223398 MRPL55Q7Z7F7 128 aaKnown RBP12.97□□□□□ -0.33
CLIP2-201ENST00000223398 AMELXQ99217 191 aa12.97□□□□□ -0.33
CLIP2-201ENST00000223398 CSDC2Q9Y534 153 aaKnown RBP12.97□□□□□ -0.33
CLIP2-201ENST00000223398 ADAMTSL4-AS1Q5T5F5 129 aa12.97□□□□□ -0.33
CLIP2-201ENST00000223398 COX8CQ7Z4L0 72 aa12.97□□□□□ -0.33
CLIP2-201ENST00000223398 C11orf72Q8NBR9 251 aa12.96□□□□□ -0.33
CLIP2-201ENST00000223398 ESRGQ1W209 222 aa12.95□□□□□ -0.34
CLIP2-201ENST00000223398 PRR4Q16378 134 aa12.94□□□□□ -0.34
CLIP2-201ENST00000223398 NTM-AS1Q6ZSK4 140 aa12.94□□□□□ -0.34
CLIP2-201ENST00000223398 RETNLBQ9BQ08 111 aa12.93□□□□□ -0.34
CLIP2-201ENST00000223398 A0A087WYN8 130 aa12.93□□□□□ -0.34
CLIP2-201ENST00000223398 Q8N814 137 aa12.93□□□□□ -0.34
CLIP2-201ENST00000223398 PRLHP81277 87 aa12.93□□□□□ -0.34
CLIP2-201ENST00000223398 Q9BRP9 147 aa12.93□□□□□ -0.34
CLIP2-201ENST00000223398 A8MTW9 85 aa12.92□□□□□ -0.34
CLIP2-201ENST00000223398 C2orf48Q96LS8 159 aa12.92□□□□□ -0.34
CLIP2-201ENST00000223398 FLNBO75369 2602 aaKnown RBP12.92□□□□□ -0.34
CLIP2-201ENST00000223398 FAM30AQ9NZY2 134 aa12.92□□□□□ -0.34
CLIP2-201ENST00000223398 UTRNP46939 3433 aa12.92□□□□□ -0.34
CLIP2-201ENST00000223398 MPLKIPQ8TAP9 179 aa12.91□□□□□ -0.34
CLIP2-201ENST00000223398 SNURFQ9Y675 71 aa12.91□□□□□ -0.34
CLIP2-201ENST00000223398 IGHV6-1A0A0B4J1U7 121 aa12.9□□□□□ -0.34
CLIP2-201ENST00000223398 J3KT08 172 aa12.9□□□□□ -0.34
CLIP2-201ENST00000223398 F8P00451 2351 aa12.9□□□□□ -0.34
CLIP2-201ENST00000223398 FAM19A3Q7Z5A8 133 aa12.88□□□□□ -0.35
CLIP2-201ENST00000223398 A0A096LNJ9 63 aa12.88□□□□□ -0.35
CLIP2-201ENST00000223398 KIF25-AS1Q9Y6Z4 181 aa12.86□□□□□ -0.35
CLIP2-201ENST00000223398 X6R8D5 127 aa12.86□□□□□ -0.35
CLIP2-201ENST00000223398 DEFB116Q30KQ4 102 aa12.86□□□□□ -0.35
CLIP2-201ENST00000223398 PTPRBP23467 1997 aa12.85□□□□□ -0.35
CLIP2-201ENST00000223398 C22orf24Q9Y442 160 aa12.85□□□□□ -0.35
CLIP2-201ENST00000223398 Q8N9L7 120 aa12.84□□□□□ -0.35
CLIP2-201ENST00000223398 PRYO14603 147 aa12.83□□□□□ -0.36
CLIP2-201ENST00000223398 F8WDY8 70 aa12.83□□□□□ -0.36
CLIP2-201ENST00000223398 SPTSSBQ8NFR3 76 aa12.83□□□□□ -0.36
CLIP2-201ENST00000223398 A0A087WSZ3 146 aa12.83□□□□□ -0.36
CLIP2-201ENST00000223398 FAM236DA0A1B0GTK5 79 aa12.83□□□□□ -0.36
CLIP2-201ENST00000223398 UQCRQO14949 82 aa12.83□□□□□ -0.36
CLIP2-201ENST00000223398 FAM236CP0DP71 79 aa12.83□□□□□ -0.36
CLIP2-201ENST00000223398 Q6ZVQ6 151 aa12.82□□□□□ -0.36
CLIP2-201ENST00000223398 HECTD1Q9ULT8 2610 aa12.82□□□□□ -0.36
CLIP2-201ENST00000223398 Q8N3U1 123 aa12.81□□□□□ -0.36
CLIP2-201ENST00000223398 COL27A1Q8IZC6 1860 aaPredicted RBP12.81□□□□□ -0.36
CLIP2-201ENST00000223398 Q9UF83 564 aa12.8□□□□□ -0.36
CLIP2-201ENST00000223398 LINC00315P59091 139 aa12.8□□□□□ -0.36
CLIP2-201ENST00000223398 MUC4Q99102 2169 aa12.79□□□□□ -0.36
CLIP2-201ENST00000223398 SMCR5Q8TEV8 140 aa12.78□□□□□ -0.36
CLIP2-201ENST00000223398 BRK1Q8WUW1 75 aa12.78□□□□□ -0.36
CLIP2-201ENST00000223398 NDUFC2O95298 119 aa12.78□□□□□ -0.36
CLIP2-201ENST00000223398 Q6JHZ5 121 aa12.78□□□□□ -0.36
CLIP2-201ENST00000223398 FAM19A4Q96LR4 140 aa12.77□□□□□ -0.36
CLIP2-201ENST00000223398 DNAH12Q6ZR08 3092 aa12.77□□□□□ -0.36
CLIP2-201ENST00000223398 XGP55808 180 aa12.77□□□□□ -0.37
CLIP2-201ENST00000223398 LINC00575Q6W349 94 aa12.76□□□□□ -0.37
CLIP2-201ENST00000223398 SVIPQ8NHG7 77 aa12.76□□□□□ -0.37
CLIP2-201ENST00000223398 LINC01547P58512 204 aaPredicted RBP12.75□□□□□ -0.37
CLIP2-201ENST00000223398 LINC01561Q8N1V8 128 aa12.75□□□□□ -0.37
CLIP2-201ENST00000223398 K7ERS5 55 aa12.74□□□□□ -0.37
CLIP2-201ENST00000223398 LINC00337Q8N6G1 96 aa12.74□□□□□ -0.37
CLIP2-201ENST00000223398 PCSK5Q92824 1860 aa12.74□□□□□ -0.37
CLIP2-201ENST00000223398 IGHV3OR16-9A0A0B4J2B5 98 aa12.73□□□□□ -0.37
CLIP2-201ENST00000223398 SERP2Q8N6R1 65 aa12.73□□□□□ -0.37
CLIP2-201ENST00000223398 Q8NAQ8 132 aa12.73□□□□□ -0.37
CLIP2-201ENST00000223398 SERP1Q9Y6X1 66 aa12.73□□□□□ -0.37
CLIP2-201ENST00000223398 NBDYA0A0U1RRE5 68 aa12.72□□□□□ -0.37
CLIP2-201ENST00000223398 LINC00208Q96KT6 92 aa12.72□□□□□ -0.37
CLIP2-201ENST00000223398 LINC00588Q9Y4M8 146 aa12.72□□□□□ -0.37
CLIP2-201ENST00000223398 A0A087WVE0 104 aa12.71□□□□□ -0.37
CLIP2-201ENST00000223398 C6orf48Q9UBA6 75 aa12.71□□□□□ -0.37
CLIP2-201ENST00000223398 LINC00167Q96N53 147 aa12.71□□□□□ -0.38
CLIP2-201ENST00000223398 C16orf90A8MZG2 172 aa12.7□□□□□ -0.38
CLIP2-201ENST00000223398 WWC2-AS2Q96NR7 200 aa12.7□□□□□ -0.38
CLIP2-201ENST00000223398 RTL8CO15255 209 aa12.7□□□□□ -0.38
CLIP2-201ENST00000223398 PRR15LQ9BU68 103 aa12.69□□□□□ -0.38
CLIP2-201ENST00000223398 SPACA4Q8TDM5 124 aa12.69□□□□□ -0.38
CLIP2-201ENST00000223398 PHF5AQ7RTV0 110 aaKnown RBP12.67□□□□□ -0.38
CLIP2-201ENST00000223398 H3BNG1 76 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms