RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 PMVKQ15126 192 aa8.01□□□□□ -1.13
LSM5-201ENST00000223084 PDZD11Q5EBL8 140 aa8.01□□□□□ -1.13
LSM5-201ENST00000223084 LINC00469Q8N7U9 141 aa8.01□□□□□ -1.13
LSM5-201ENST00000223084 MRPL35Q9NZE8 188 aaKnown RBP8.01□□□□□ -1.13
LSM5-201ENST00000223084 TOMM7Q9P0U1 55 aa8.01□□□□□ -1.13
LSM5-201ENST00000223084 C6orf48Q9UBA6 75 aa8.01□□□□□ -1.13
LSM5-201ENST00000223084 TINCRA0A1B0GVN0 87 aa8□□□□□ -1.13
LSM5-201ENST00000223084 F8WDY8 70 aa8□□□□□ -1.13
LSM5-201ENST00000223084 RPL37AP61513 92 aaKnown RBP8□□□□□ -1.13
LSM5-201ENST00000223084 RPL18AQ02543 176 aaKnown RBP8□□□□□ -1.13
LSM5-201ENST00000223084 RNF151Q2KHN1 245 aa8□□□□□ -1.13
LSM5-201ENST00000223084 PKIGQ9Y2B9 76 aa8□□□□□ -1.13
LSM5-201ENST00000223084 HIST1H2BKO60814 126 aa7.99□□□□□ -1.13
LSM5-201ENST00000223084 HIST1H2BJP06899 126 aa7.99□□□□□ -1.13
LSM5-201ENST00000223084 PRSS2P07478 247 aa7.99□□□□□ -1.13
LSM5-201ENST00000223084 HIST1H2BOP23527 126 aa7.99□□□□□ -1.13
LSM5-201ENST00000223084 HIST1H2BBP33778 126 aa7.99□□□□□ -1.13
LSM5-201ENST00000223084 HIST1H2BDP58876 126 aa7.99□□□□□ -1.13
LSM5-201ENST00000223084 HIST1H2BCP62807 126 aa7.99□□□□□ -1.13
LSM5-201ENST00000223084 HIST2H2BEQ16778 126 aa7.99□□□□□ -1.13
LSM5-201ENST00000223084 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.99□□□□□ -1.13
LSM5-201ENST00000223084 BAGE3Q86Y29 109 aa7.99□□□□□ -1.13
LSM5-201ENST00000223084 HIST1H2BHQ93079 126 aa7.99□□□□□ -1.13
LSM5-201ENST00000223084 CHCHD1Q96BP2 118 aaKnown RBP7.99□□□□□ -1.13
LSM5-201ENST00000223084 PACRGQ96M98 296 aaPredicted RBP7.99□□□□□ -1.13
LSM5-201ENST00000223084 HIST1H2BNQ99877 126 aa7.99□□□□□ -1.13
LSM5-201ENST00000223084 HIST1H2BMQ99879 126 aa7.99□□□□□ -1.13
LSM5-201ENST00000223084 LINC00474Q9P2X8 69 aa7.99□□□□□ -1.13
LSM5-201ENST00000223084 IGLV5-45A0A087WSX0 123 aa7.98□□□□□ -1.13
LSM5-201ENST00000223084 SMIM1B2RUZ4 78 aa7.97□□□□□ -1.13
LSM5-201ENST00000223084 ATP5LO75964 103 aa7.97□□□□□ -1.13
LSM5-201ENST00000223084 SPINK8P0C7L1 97 aa7.97□□□□□ -1.13
LSM5-201ENST00000223084 C9orf116Q5BN46 136 aaPredicted RBP7.97□□□□□ -1.13
LSM5-201ENST00000223084 C6orf226Q5I0X4 101 aa7.97□□□□□ -1.13
LSM5-201ENST00000223084 Q8IZM0 81 aa7.97□□□□□ -1.13
LSM5-201ENST00000223084 FAM19A2Q8N3H0 131 aa7.97□□□□□ -1.13
LSM5-201ENST00000223084 A0A1W2PNN7 141 aa7.96□□□□□ -1.14
LSM5-201ENST00000223084 IGLC3P0DOY3 106 aa7.96□□□□□ -1.14
LSM5-201ENST00000223084 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.14
LSM5-201ENST00000223084 LINC00310P59036 64 aa7.96□□□□□ -1.14
LSM5-201ENST00000223084 CKS1BP61024 79 aa7.96□□□□□ -1.14
LSM5-201ENST00000223084 Q6ZRP5 223 aa7.96□□□□□ -1.14
LSM5-201ENST00000223084 TRBV30A0A0K0K1B3 111 aa7.95□□□□□ -1.14
LSM5-201ENST00000223084 HSBP1O75506 76 aa7.95□□□□□ -1.14
LSM5-201ENST00000223084 SERF1AO75920 110 aa7.95□□□□□ -1.14
LSM5-201ENST00000223084 GAGE2EQ4V326 116 aa7.95□□□□□ -1.14
LSM5-201ENST00000223084 COA6Q5JTJ3 125 aaKnown RBP7.95□□□□□ -1.14
LSM5-201ENST00000223084 GAGE2DQ9UEU5 116 aa7.95□□□□□ -1.14
LSM5-201ENST00000223084 NUPR1O60356 82 aa7.94□□□□□ -1.14
LSM5-201ENST00000223084 TLX1NBP0CAT3 122 aa7.94□□□□□ -1.14
LSM5-201ENST00000223084 ZNF22P17026 224 aaPredicted RBP7.94□□□□□ -1.14
LSM5-201ENST00000223084 HNRNPA3P51991 378 aaKnown RBP7.94□□□□□ -1.14
LSM5-201ENST00000223084 COX7B2Q8TF08 81 aa7.94□□□□□ -1.14
LSM5-201ENST00000223084 C7orf33Q8WU49 177 aa7.94□□□□□ -1.14
LSM5-201ENST00000223084 IFI27L1Q96BM0 104 aa7.94□□□□□ -1.14
LSM5-201ENST00000223084 PKHD1L1Q86WI1 4243 aa7.94□□□□□ -1.14
LSM5-201ENST00000223084 FAM168BA1KXE4 195 aa7.93□□□□□ -1.14
LSM5-201ENST00000223084 C11orf86A6NJI1 115 aa7.93□□□□□ -1.14
LSM5-201ENST00000223084 H3BRM9 83 aa7.93□□□□□ -1.14
LSM5-201ENST00000223084 MYCBP2O75592 4640 aa7.92□□□□□ -1.14
LSM5-201ENST00000223084 NDUFC2-KCTD14E9PQ53 114 aa7.92□□□□□ -1.14
LSM5-201ENST00000223084 F8VRH5 84 aa7.92□□□□□ -1.14
LSM5-201ENST00000223084 CHTOPQ9Y3Y2 248 aaKnown RBP7.92□□□□□ -1.14
LSM5-201ENST00000223084 TRAV12-1A0A0B4J245 112 aa7.9□□□□□ -1.14
LSM5-201ENST00000223084 CXCL5P42830 114 aa7.9□□□□□ -1.14
LSM5-201ENST00000223084 C9orf129Q5T035 196 aaKnown RBP7.9□□□□□ -1.14
LSM5-201ENST00000223084 TMEM170BQ5T4T1 132 aa7.9□□□□□ -1.14
LSM5-201ENST00000223084 PHF5AQ7RTV0 110 aaKnown RBP7.9□□□□□ -1.14
LSM5-201ENST00000223084 FAM19A5Q7Z5A7 132 aaPredicted RBP7.9□□□□□ -1.14
LSM5-201ENST00000223084 IGLV5-39A0A0G2JS06 123 aa7.89□□□□□ -1.15
LSM5-201ENST00000223084 H0Y8G0 127 aa7.89□□□□□ -1.15
LSM5-201ENST00000223084 PRR3P79522 188 aaKnown RBP7.89□□□□□ -1.15
LSM5-201ENST00000223084 KRTAP7-1Q8IUC3 87 aa7.89□□□□□ -1.15
LSM5-201ENST00000223084 EIF4EBP3O60516 100 aaPredicted RBP7.88□□□□□ -1.15
LSM5-201ENST00000223084 LEPROTL1O95214 131 aa7.88□□□□□ -1.15
LSM5-201ENST00000223084 S100A6P06703 90 aa7.88□□□□□ -1.15
LSM5-201ENST00000223084 FABP4P15090 132 aa7.88□□□□□ -1.15
LSM5-201ENST00000223084 XAGE1AQ9HD64 81 aa7.88□□□□□ -1.15
LSM5-201ENST00000223084 ODF1Q14990 250 aa7.86□□□□□ -1.15
LSM5-201ENST00000223084 KRTAP11-1Q8IUC1 163 aa7.86□□□□□ -1.15
LSM5-201ENST00000223084 LRP1Q07954 4544 aaKnown RBP7.86□□□□□ -1.15
LSM5-201ENST00000223084 TMEM223A0PJW6 202 aa7.85□□□□□ -1.15
LSM5-201ENST00000223084 SERTAD4-AS1Q5TG53 156 aa7.85□□□□□ -1.15
LSM5-201ENST00000223084 HSPB8Q9UJY1 196 aa7.85□□□□□ -1.15
LSM5-201ENST00000223084 FAT3Q8TDW7 4589 aa7.85□□□□□ -1.15
LSM5-201ENST00000223084 KRTAP29-1A8MX34 341 aaPredicted RBP7.84□□□□□ -1.15
LSM5-201ENST00000223084 M0QXV9 152 aa7.84□□□□□ -1.15
LSM5-201ENST00000223084 ZNF625Q96I27 306 aaPredicted RBP7.84□□□□□ -1.15
LSM5-201ENST00000223084 PMCHL2Q9BQD1 86 aa7.84□□□□□ -1.15
LSM5-201ENST00000223084 PSORS1C2Q9UIG4 136 aa7.84□□□□□ -1.15
LSM5-201ENST00000223084 C5orf52A6NGY3 159 aa7.83□□□□□ -1.16
LSM5-201ENST00000223084 PFN2P35080 140 aa7.83□□□□□ -1.16
LSM5-201ENST00000223084 HIST3H2BBQ8N257 126 aa7.83□□□□□ -1.16
LSM5-201ENST00000223084 S100A2P29034 98 aa7.81□□□□□ -1.16
LSM5-201ENST00000223084 SNRPEP62304 92 aaKnown RBP7.81□□□□□ -1.16
LSM5-201ENST00000223084 C1orf137Q5JT78 98 aa7.81□□□□□ -1.16
LSM5-201ENST00000223084 ERG28Q9UKR5 140 aa7.81□□□□□ -1.16
LSM5-201ENST00000223084 TMA7Q9Y2S6 64 aaKnown RBP7.81□□□□□ -1.16
LSM5-201ENST00000223084 C22orf24Q9Y442 160 aa7.81□□□□□ -1.16
LSM5-201ENST00000223084 UBE2BP63146 152 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms