RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 C6orf226Q5I0X4 101 aa10.66□□□□□ -0.7
LIM2-201ENST00000221973 NTN5Q8WTR8 489 aaPredicted RBP10.66□□□□□ -0.7
LIM2-201ENST00000221973 PGPEP1Q9NXJ5 209 aa10.66□□□□□ -0.7
LIM2-201ENST00000221973 IGLV5-39A0A0G2JS06 123 aa10.65□□□□□ -0.7
LIM2-201ENST00000221973 Q8IZM0 81 aa10.65□□□□□ -0.7
LIM2-201ENST00000221973 ATOH7Q8N100 152 aa10.65□□□□□ -0.7
LIM2-201ENST00000221973 COX7B2Q8TF08 81 aa10.65□□□□□ -0.7
LIM2-201ENST00000221973 C2orf48Q96LS8 159 aa10.65□□□□□ -0.7
LIM2-201ENST00000221973 CAMK2N2Q96S95 79 aa10.65□□□□□ -0.7
LIM2-201ENST00000221973 CNBPP62633 177 aaKnown RBP10.64□□□□□ -0.71
LIM2-201ENST00000221973 SYCNQ0VAF6 134 aa10.64□□□□□ -0.71
LIM2-201ENST00000221973 C2orf82Q6UX34 121 aa10.64□□□□□ -0.71
LIM2-201ENST00000221973 SCGB1D1O95968 90 aa10.63□□□□□ -0.71
LIM2-201ENST00000221973 CKS1BP61024 79 aa10.63□□□□□ -0.71
LIM2-201ENST00000221973 HERVK_113P61574 105 aa10.63□□□□□ -0.71
LIM2-201ENST00000221973 Q6ZRU5 148 aa10.63□□□□□ -0.71
LIM2-201ENST00000221973 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.62□□□□□ -0.71
LIM2-201ENST00000221973 NDUFA1O15239 70 aa10.62□□□□□ -0.71
LIM2-201ENST00000221973 KRTAP10-1P60331 282 aa10.62□□□□□ -0.71
LIM2-201ENST00000221973 LINC01620Q4KN68 170 aa10.62□□□□□ -0.71
LIM2-201ENST00000221973 CDPF1Q6NVV7 123 aa10.62□□□□□ -0.71
LIM2-201ENST00000221973 UNQ6190/PRO20217Q6UXQ8 127 aa10.62□□□□□ -0.71
LIM2-201ENST00000221973 STPG4Q8N801 248 aa10.62□□□□□ -0.71
LIM2-201ENST00000221973 CARD19Q96LW7 228 aa10.62□□□□□ -0.71
LIM2-201ENST00000221973 C10orf25Q5T742 122 aa10.61□□□□□ -0.71
LIM2-201ENST00000221973 EPM2AB3EWF7 344 aa10.6□□□□□ -0.71
LIM2-201ENST00000221973 F8WDY8 70 aa10.6□□□□□ -0.71
LIM2-201ENST00000221973 AKR1D1P51857 326 aa10.6□□□□□ -0.71
LIM2-201ENST00000221973 SRRM2Q9UQ35 2752 aaKnown RBP10.6□□□□□ -0.71
LIM2-201ENST00000221973 DNAH8Q96JB1 4490 aa10.59□□□□□ -0.71
LIM2-201ENST00000221973 LEPROTO15243 131 aa10.59□□□□□ -0.71
LIM2-201ENST00000221973 CXCL5P42830 114 aa10.59□□□□□ -0.71
LIM2-201ENST00000221973 C9orf163Q8N9P6 203 aa10.59□□□□□ -0.71
LIM2-201ENST00000221973 E9PLD3 99 aa10.58□□□□□ -0.72
LIM2-201ENST00000221973 PLEKHB2Q96CS7 222 aa10.58□□□□□ -0.72
LIM2-201ENST00000221973 C6orf48Q9UBA6 75 aa10.58□□□□□ -0.72
LIM2-201ENST00000221973 DMBT1Q9UGM3 2413 aaPredicted RBP10.57□□□□□ -0.72
LIM2-201ENST00000221973 GCSHP23434 173 aa10.57□□□□□ -0.72
LIM2-201ENST00000221973 TSPEAR-AS2P59090 65 aa10.57□□□□□ -0.72
LIM2-201ENST00000221973 JOSD1Q15040 202 aaPredicted RBP10.57□□□□□ -0.72
LIM2-201ENST00000221973 J3QQQ9 107 aa10.56□□□□□ -0.72
LIM2-201ENST00000221973 MAJINQ3KP22 176 aa10.56□□□□□ -0.72
LIM2-201ENST00000221973 ANKRD39Q53RE8 183 aa10.56□□□□□ -0.72
LIM2-201ENST00000221973 IGKV2D-26A0A0A0MRZ7 120 aa10.55□□□□□ -0.72
LIM2-201ENST00000221973 TRBV30A0A0K0K1B3 111 aa10.55□□□□□ -0.72
LIM2-201ENST00000221973 LGALS3P17931 250 aaKnown RBP10.55□□□□□ -0.72
LIM2-201ENST00000221973 RNF151Q2KHN1 245 aa10.55□□□□□ -0.72
LIM2-201ENST00000221973 C9orf116Q5BN46 136 aaPredicted RBP10.55□□□□□ -0.72
LIM2-201ENST00000221973 Q5VSD8 79 aa10.55□□□□□ -0.72
LIM2-201ENST00000221973 HSBP1L1C9JCN9 74 aa10.54□□□□□ -0.72
LIM2-201ENST00000221973 INAFM2P0DMQ5 153 aa10.54□□□□□ -0.72
LIM2-201ENST00000221973 ZNF625Q96I27 306 aaPredicted RBP10.54□□□□□ -0.72
LIM2-201ENST00000221973 NDUFA12Q9UI09 145 aa10.54□□□□□ -0.72
LIM2-201ENST00000221973 FLG2Q5D862 2391 aaPredicted RBP10.53□□□□□ -0.72
LIM2-201ENST00000221973 PYY3Q5JQD4 70 aa10.53□□□□□ -0.72
LIM2-201ENST00000221973 SDIM1Q6ZPB5 146 aa10.53□□□□□ -0.72
LIM2-201ENST00000221973 MYMXA0A1B0GTQ4 84 aa10.52□□□□□ -0.73
LIM2-201ENST00000221973 NMUP48645 174 aa10.52□□□□□ -0.73
LIM2-201ENST00000221973 HAMPP81172 84 aa10.52□□□□□ -0.73
LIM2-201ENST00000221973 SFTA2Q6UW10 78 aa10.52□□□□□ -0.73
LIM2-201ENST00000221973 LOC107984640A0A0U1RRK4 108 aa10.51□□□□□ -0.73
LIM2-201ENST00000221973 SMR3BP02814 79 aaPredicted RBP10.51□□□□□ -0.73
LIM2-201ENST00000221973 RPL18AQ02543 176 aaKnown RBP10.51□□□□□ -0.73
LIM2-201ENST00000221973 TTTY13Q9BZ97 58 aa10.5□□□□□ -0.73
LIM2-201ENST00000221973 PFN2P35080 140 aa10.49□□□□□ -0.73
LIM2-201ENST00000221973 HERV-K104P63124 156 aa10.49□□□□□ -0.73
LIM2-201ENST00000221973 GAGE2BQ13066 116 aa10.49□□□□□ -0.73
LIM2-201ENST00000221973 PKIGQ9Y2B9 76 aa10.49□□□□□ -0.73
LIM2-201ENST00000221973 A0A096LNI7 61 aa10.48□□□□□ -0.73
LIM2-201ENST00000221973 IGKV2-24A0A0C4DH68 120 aa10.48□□□□□ -0.73
LIM2-201ENST00000221973 NDUFC2-KCTD14E9PQ53 114 aa10.48□□□□□ -0.73
LIM2-201ENST00000221973 TLX1NBP0CAT3 122 aa10.48□□□□□ -0.73
LIM2-201ENST00000221973 CHTF8P0CG12 524 aa10.48□□□□□ -0.73
LIM2-201ENST00000221973 Q6ZRP5 223 aa10.48□□□□□ -0.73
LIM2-201ENST00000221973 ERG28Q9UKR5 140 aa10.48□□□□□ -0.73
LIM2-201ENST00000221973 LOC105371267A0A1B0GV96 52 aa10.47□□□□□ -0.73
LIM2-201ENST00000221973 ZNF815PA8K554 130 aa10.47□□□□□ -0.73
LIM2-201ENST00000221973 GAGE2EQ4V326 116 aa10.47□□□□□ -0.73
LIM2-201ENST00000221973 MEIG1Q5JSS6 88 aa10.47□□□□□ -0.73
LIM2-201ENST00000221973 PCP2Q8IVA1 136 aa10.47□□□□□ -0.73
LIM2-201ENST00000221973 VAMP8Q9BV40 100 aa10.47□□□□□ -0.73
LIM2-201ENST00000221973 FAM30AQ9NZY2 134 aa10.47□□□□□ -0.73
LIM2-201ENST00000221973 GAGE2DQ9UEU5 116 aa10.47□□□□□ -0.73
LIM2-201ENST00000221973 PAM16Q9Y3D7 125 aa10.47□□□□□ -0.73
LIM2-201ENST00000221973 A0A0U1RRA0 63 aa10.46□□□□□ -0.73
LIM2-201ENST00000221973 PANO1I0J062 215 aa10.46□□□□□ -0.73
LIM2-201ENST00000221973 PTTG1IPP53801 180 aa10.46□□□□□ -0.73
LIM2-201ENST00000221973 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.46□□□□□ -0.73
LIM2-201ENST00000221973 SMIM13P0DJ93 91 aa10.45□□□□□ -0.74
LIM2-201ENST00000221973 LINC00158P58513 81 aa10.45□□□□□ -0.74
LIM2-201ENST00000221973 DPH3Q96FX2 82 aa10.45□□□□□ -0.74
LIM2-201ENST00000221973 A0A0J9YXY3 114 aa10.44□□□□□ -0.74
LIM2-201ENST00000221973 COX17Q14061 63 aa10.44□□□□□ -0.74
LIM2-201ENST00000221973 SPATA45Q537H7 98 aa10.44□□□□□ -0.74
LIM2-201ENST00000221973 LINC00587B1AMM8 73 aa10.43□□□□□ -0.74
LIM2-201ENST00000221973 Q6ZSA8 131 aa10.43□□□□□ -0.74
LIM2-201ENST00000221973 XAGE1AQ9HD64 81 aa10.43□□□□□ -0.74
LIM2-201ENST00000221973 SPACA4Q8TDM5 124 aa10.42□□□□□ -0.74
LIM2-201ENST00000221973 LINC00474Q9P2X8 69 aa10.42□□□□□ -0.74
LIM2-201ENST00000221973 FAM229AH3BQW9 127 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms