RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 CRIP3Q6Q6R5 217 aa7.52□□□□□ -1.2
TRPS1-201ENST00000220888 C16orf90A8MZG2 172 aa7.52□□□□□ -1.21
TRPS1-201ENST00000220888 A0A1W2PPR1 153 aa7.52□□□□□ -1.21
TRPS1-201ENST00000220888 LINC01547P58512 204 aaPredicted RBP7.52□□□□□ -1.21
TRPS1-201ENST00000220888 SMIM1B2RUZ4 78 aa7.52□□□□□ -1.21
TRPS1-201ENST00000220888 ABCA12Q86UK0 2595 aa7.52□□□□□ -1.21
TRPS1-201ENST00000220888 COL4A4P53420 1690 aaPredicted RBP7.51□□□□□ -1.21
TRPS1-201ENST00000220888 ARHGAP21Q5T5U3 1957 aa7.51□□□□□ -1.21
TRPS1-201ENST00000220888 MT-ATP8P03928 68 aa7.51□□□□□ -1.21
TRPS1-201ENST00000220888 Q8N814 137 aa7.51□□□□□ -1.21
TRPS1-201ENST00000220888 SPACA4Q8TDM5 124 aa7.5□□□□□ -1.21
TRPS1-201ENST00000220888 ZNF106Q9H2Y7 1883 aaKnown RBP7.5□□□□□ -1.21
TRPS1-201ENST00000220888 A0A1B0GUV1 79 aa7.5□□□□□ -1.21
TRPS1-201ENST00000220888 PRLHP81277 87 aa7.5□□□□□ -1.21
TRPS1-201ENST00000220888 MUC4Q99102 2169 aa7.49□□□□□ -1.21
TRPS1-201ENST00000220888 LINC00694P0DN24 101 aa7.49□□□□□ -1.21
TRPS1-201ENST00000220888 PRR3P79522 188 aaKnown RBP7.49□□□□□ -1.21
TRPS1-201ENST00000220888 PCOTHQ58A44 107 aa7.49□□□□□ -1.21
TRPS1-201ENST00000220888 WWC2-AS2Q96NR7 200 aa7.49□□□□□ -1.21
TRPS1-201ENST00000220888 FN1P02751 2386 aaKnown RBP7.49□□□□□ -1.21
TRPS1-201ENST00000220888 SBSPONQ8IVN8 264 aa7.48□□□□□ -1.21
TRPS1-201ENST00000220888 Q6ZRU5 148 aa7.48□□□□□ -1.21
TRPS1-201ENST00000220888 IGIPA6NJ69 53 aa7.48□□□□□ -1.21
TRPS1-201ENST00000220888 CSDC2Q9Y534 153 aaKnown RBP7.48□□□□□ -1.21
TRPS1-201ENST00000220888 TLN1Q9Y490 2541 aaKnown RBP7.48□□□□□ -1.21
TRPS1-201ENST00000220888 IGKV2D-30A0A075B6S6 120 aa7.47□□□□□ -1.21
TRPS1-201ENST00000220888 A0A0U1RQV1 116 aa7.47□□□□□ -1.21
TRPS1-201ENST00000220888 IGKV2-30P06310 120 aa7.47□□□□□ -1.21
TRPS1-201ENST00000220888 SMCR5Q8TEV8 140 aa7.47□□□□□ -1.21
TRPS1-201ENST00000220888 TLN2Q9Y4G6 2542 aa7.47□□□□□ -1.21
TRPS1-201ENST00000220888 IMUPQ9GZP8 106 aa7.47□□□□□ -1.21
TRPS1-201ENST00000220888 KIAA1549Q9HCM3 1950 aa7.47□□□□□ -1.21
TRPS1-201ENST00000220888 hDV103S1A0JD37 113 aa7.47□□□□□ -1.21
TRPS1-201ENST00000220888 BEAN1Q3B7T3 259 aa7.47□□□□□ -1.21
TRPS1-201ENST00000220888 CNFNQ9BYD5 112 aa7.47□□□□□ -1.21
TRPS1-201ENST00000220888 C22orf24Q9Y442 160 aa7.47□□□□□ -1.21
TRPS1-201ENST00000220888 GAS8-AS1O95177 125 aa7.46□□□□□ -1.21
TRPS1-201ENST00000220888 PLA2G1BP04054 148 aaKnown RBP7.46□□□□□ -1.21
TRPS1-201ENST00000220888 KRTAP24-1Q3LI83 254 aa7.46□□□□□ -1.21
TRPS1-201ENST00000220888 PCDH15Q96QU1 1955 aa7.46□□□□□ -1.22
TRPS1-201ENST00000220888 TANC2Q9HCD6 1990 aa7.45□□□□□ -1.22
TRPS1-201ENST00000220888 ARHGAP32A7KAX9 2087 aa7.45□□□□□ -1.22
TRPS1-201ENST00000220888 DEFB116Q30KQ4 102 aa7.45□□□□□ -1.22
TRPS1-201ENST00000220888 LINC00575Q6W349 94 aa7.45□□□□□ -1.22
TRPS1-201ENST00000220888 HCG22E2RYF7 251 aa7.44□□□□□ -1.22
TRPS1-201ENST00000220888 LINC01561Q8N1V8 128 aa7.44□□□□□ -1.22
TRPS1-201ENST00000220888 F8P00451 2351 aa7.44□□□□□ -1.22
TRPS1-201ENST00000220888 CRYGAP11844 174 aa7.44□□□□□ -1.22
TRPS1-201ENST00000220888 H0Y9P7 68 aa7.43□□□□□ -1.22
TRPS1-201ENST00000220888 MOBPQ13875 183 aa7.42□□□□□ -1.22
TRPS1-201ENST00000220888 RTL8CO15255 209 aa7.42□□□□□ -1.22
TRPS1-201ENST00000220888 TYMSOSQ8TAI1 123 aa7.41□□□□□ -1.22
TRPS1-201ENST00000220888 TRAV7A0A075B6U4 112 aa7.41□□□□□ -1.22
TRPS1-201ENST00000220888 A0A087WYN8 130 aa7.41□□□□□ -1.22
TRPS1-201ENST00000220888 Q6ZRP5 223 aa7.41□□□□□ -1.22
TRPS1-201ENST00000220888 Q6ZSN1 163 aa7.41□□□□□ -1.22
TRPS1-201ENST00000220888 C7orf65Q6ZTY9 151 aa7.41□□□□□ -1.22
TRPS1-201ENST00000220888 NBDYA0A0U1RRE5 68 aa7.4□□□□□ -1.22
TRPS1-201ENST00000220888 COX7CP15954 63 aa7.4□□□□□ -1.22
TRPS1-201ENST00000220888 KIF25-AS1Q9Y6Z4 181 aa7.4□□□□□ -1.22
TRPS1-201ENST00000220888 COX6B2Q6YFQ2 88 aa7.4□□□□□ -1.23
TRPS1-201ENST00000220888 LINC00315P59091 139 aa7.4□□□□□ -1.23
TRPS1-201ENST00000220888 AMELXQ99217 191 aa7.4□□□□□ -1.23
TRPS1-201ENST00000220888 EXPH5Q8NEV8 1989 aa7.4□□□□□ -1.23
TRPS1-201ENST00000220888 PCNX3Q9H6A9 2034 aa7.39□□□□□ -1.23
TRPS1-201ENST00000220888 CEP192Q8TEP8 1941 aa7.39□□□□□ -1.23
TRPS1-201ENST00000220888 TRBV7-7A0A0K0K1E9 115 aa7.38□□□□□ -1.23
TRPS1-201ENST00000220888 USP9XQ93008 2570 aaPredicted RBP7.38□□□□□ -1.23
TRPS1-201ENST00000220888 Q8N3U1 123 aa7.37□□□□□ -1.23
TRPS1-201ENST00000220888 FASNP49327 2511 aaKnown RBP7.36□□□□□ -1.23
TRPS1-201ENST00000220888 ATP11AUNQ6ZP68 121 aa7.36□□□□□ -1.23
TRPS1-201ENST00000220888 H3BNG1 76 aa7.36□□□□□ -1.23
TRPS1-201ENST00000220888 C2orf91Q6ZV80 131 aa7.36□□□□□ -1.23
TRPS1-201ENST00000220888 LINC00167Q96N53 147 aa7.36□□□□□ -1.23
TRPS1-201ENST00000220888 A8MTW9 85 aa7.35□□□□□ -1.23
TRPS1-201ENST00000220888 NUP210LQ5VU65 1888 aa7.35□□□□□ -1.23
TRPS1-201ENST00000220888 RPL37AP61513 92 aaKnown RBP7.34□□□□□ -1.23
TRPS1-201ENST00000220888 SMIM26A0A096LP01 95 aa7.34□□□□□ -1.23
TRPS1-201ENST00000220888 ADAMTSL4-AS1Q5T5F5 129 aa7.34□□□□□ -1.23
TRPS1-201ENST00000220888 RAI1Q7Z5J4 1906 aaPredicted RBP7.34□□□□□ -1.23
TRPS1-201ENST00000220888 TSPEAR-AS2P59090 65 aa7.33□□□□□ -1.24
TRPS1-201ENST00000220888 C1orf64Q8NEQ6 169 aa7.33□□□□□ -1.24
TRPS1-201ENST00000220888 Q8NBF4 154 aa7.33□□□□□ -1.24
TRPS1-201ENST00000220888 KIAA0087Q14695 138 aa7.32□□□□□ -1.24
TRPS1-201ENST00000220888 PHF5AQ7RTV0 110 aaKnown RBP7.32□□□□□ -1.24
TRPS1-201ENST00000220888 A0A087WVE0 104 aa7.32□□□□□ -1.24
TRPS1-201ENST00000220888 KIAA1549LQ6ZVL6 1849 aa7.32□□□□□ -1.24
TRPS1-201ENST00000220888 C10orf142B7Z368 130 aa7.32□□□□□ -1.24
TRPS1-201ENST00000220888 HCFC1P51610 2035 aa7.32□□□□□ -1.24
TRPS1-201ENST00000220888 SOSTDC1Q6X4U4 206 aa7.31□□□□□ -1.24
TRPS1-201ENST00000220888 SETD2Q9BYW2 2564 aaPredicted RBP7.31□□□□□ -1.24
TRPS1-201ENST00000220888 C11orf72Q8NBR9 251 aa7.31□□□□□ -1.24
TRPS1-201ENST00000220888 TP53AIP1Q9HCN2 124 aa7.31□□□□□ -1.24
TRPS1-201ENST00000220888 CHTF8P0CG12 524 aa7.3□□□□□ -1.24
TRPS1-201ENST00000220888 ADAMTS20P59510 1910 aa7.3□□□□□ -1.24
TRPS1-201ENST00000220888 LINC00313P59037 77 aa7.3□□□□□ -1.24
TRPS1-201ENST00000220888 COX8CQ7Z4L0 72 aa7.3□□□□□ -1.24
TRPS1-201ENST00000220888 AGRNO00468 2067 aa7.29□□□□□ -1.24
TRPS1-201ENST00000220888 PKD1L2Q7Z442 2459 aa7.29□□□□□ -1.24
TRPS1-201ENST00000220888 PMAIP1Q13794 54 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms