RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 JMJD7-PLA2G4BH0Y9G9 81 aa10.46□□□□□ -0.74
PTPRA-201ENST00000216877 IGLV5-39A0A0G2JS06 123 aa10.45□□□□□ -0.74
PTPRA-201ENST00000216877 ATP5EP2Q5VTU8 51 aa10.44□□□□□ -0.74
PTPRA-201ENST00000216877 CFAP46Q8IYW2 2715 aa10.44□□□□□ -0.74
PTPRA-201ENST00000216877 A0A1W2PRX2 142 aa10.43□□□□□ -0.74
PTPRA-201ENST00000216877 UBE2E2Q96LR5 201 aa10.43□□□□□ -0.74
PTPRA-201ENST00000216877 Q96MF0 132 aa10.43□□□□□ -0.74
PTPRA-201ENST00000216877 RETNQ9HD89 108 aa10.43□□□□□ -0.74
PTPRA-201ENST00000216877 USMG5Q96IX5 58 aa10.43□□□□□ -0.74
PTPRA-201ENST00000216877 SIRPDQ9H106 197 aa10.43□□□□□ -0.74
PTPRA-201ENST00000216877 TM2D3Q9BRN9 247 aa10.42□□□□□ -0.74
PTPRA-201ENST00000216877 IGHV4-61A0A0C4DH41 118 aa10.42□□□□□ -0.74
PTPRA-201ENST00000216877 Q8N3U1 123 aa10.42□□□□□ -0.74
PTPRA-201ENST00000216877 MIFP14174 115 aa10.42□□□□□ -0.74
PTPRA-201ENST00000216877 TMEM256-PLSCR3K7ERE1 68 aa10.41□□□□□ -0.74
PTPRA-201ENST00000216877 C16orf95Q9H693 158 aa10.41□□□□□ -0.74
PTPRA-201ENST00000216877 IGHV4-30-2A0A087WSY4 118 aa10.4□□□□□ -0.74
PTPRA-201ENST00000216877 FLNCQ14315 2725 aa10.4□□□□□ -0.75
PTPRA-201ENST00000216877 IGLV5-45A0A087WSX0 123 aa10.39□□□□□ -0.75
PTPRA-201ENST00000216877 LINC01547P58512 204 aaPredicted RBP10.38□□□□□ -0.75
PTPRA-201ENST00000216877 C10orf99Q6UWK7 81 aa10.38□□□□□ -0.75
PTPRA-201ENST00000216877 A0A1W2PPR1 153 aa10.38□□□□□ -0.75
PTPRA-201ENST00000216877 A8MTW9 85 aa10.38□□□□□ -0.75
PTPRA-201ENST00000216877 FAM229BQ4G0N7 80 aa10.38□□□□□ -0.75
PTPRA-201ENST00000216877 CLPSL2Q6UWE3 100 aa10.38□□□□□ -0.75
PTPRA-201ENST00000216877 TRBV10-1A0A0K0K1A3 114 aa10.37□□□□□ -0.75
PTPRA-201ENST00000216877 PMAIP1Q13794 54 aa10.36□□□□□ -0.75
PTPRA-201ENST00000216877 CELSR1Q9NYQ6 3014 aa10.36□□□□□ -0.75
PTPRA-201ENST00000216877 M0R2N4 97 aa10.36□□□□□ -0.75
PTPRA-201ENST00000216877 IGHV4-38-2P0DP08 117 aa10.35□□□□□ -0.75
PTPRA-201ENST00000216877 Q8N814 137 aa10.35□□□□□ -0.75
PTPRA-201ENST00000216877 KLKP1Q107X0 134 aa10.35□□□□□ -0.75
PTPRA-201ENST00000216877 C6orf99Q4VX62 202 aa10.35□□□□□ -0.75
PTPRA-201ENST00000216877 Q8N9L7 120 aa10.35□□□□□ -0.75
PTPRA-201ENST00000216877 Q6ZVQ6 151 aa10.35□□□□□ -0.75
PTPRA-201ENST00000216877 CDC42SE2Q9NRR3 84 aa10.35□□□□□ -0.75
PTPRA-201ENST00000216877 K7EQG2 157 aa10.34□□□□□ -0.75
PTPRA-201ENST00000216877 PSPHP1O15172 72 aa10.34□□□□□ -0.75
PTPRA-201ENST00000216877 FUSP35637 526 aaKnown RBP eCLIP10.34□□□□□ -0.75
PTPRA-201ENST00000216877 ZNF843Q8N446 348 aa10.34□□□□□ -0.75
PTPRA-201ENST00000216877 OBSCN-AS1Q96MR7 158 aa10.34□□□□□ -0.75
PTPRA-201ENST00000216877 B4DSR2 109 aa10.34□□□□□ -0.75
PTPRA-201ENST00000216877 CRYBG3Q68DQ2 2970 aa10.34□□□□□ -0.75
PTPRA-201ENST00000216877 MSMBP08118 114 aa10.34□□□□□ -0.75
PTPRA-201ENST00000216877 NREPQ16612 68 aa10.33□□□□□ -0.76
PTPRA-201ENST00000216877 TMEM254Q8TBM7 123 aa10.33□□□□□ -0.76
PTPRA-201ENST00000216877 HELZ2Q9BYK8 2649 aaKnown RBP10.33□□□□□ -0.76
PTPRA-201ENST00000216877 PRR4Q16378 134 aa10.33□□□□□ -0.76
PTPRA-201ENST00000216877 TRGV2A0A075B6R0 118 aa10.32□□□□□ -0.76
PTPRA-201ENST00000216877 TRBV6-4A0A1B0GX49 114 aa10.32□□□□□ -0.76
PTPRA-201ENST00000216877 CELSR2Q9HCU4 2923 aa10.31□□□□□ -0.76
PTPRA-201ENST00000216877 NTM-AS1Q6ZSK4 140 aa10.31□□□□□ -0.76
PTPRA-201ENST00000216877 NDUFC1O43677 76 aa10.3□□□□□ -0.76
PTPRA-201ENST00000216877 DEFB136Q30KP8 78 aa10.3□□□□□ -0.76
PTPRA-201ENST00000216877 DYNLRB2Q8TF09 96 aa10.3□□□□□ -0.76
PTPRA-201ENST00000216877 LOC100131303A0A0U1RQF7 123 aa10.29□□□□□ -0.76
PTPRA-201ENST00000216877 ESRGQ1W209 222 aa10.29□□□□□ -0.76
PTPRA-201ENST00000216877 TRBV10-3A0A0K0K1G6 114 aa10.29□□□□□ -0.76
PTPRA-201ENST00000216877 IBA57-AS1B1ANH7 110 aa10.29□□□□□ -0.76
PTPRA-201ENST00000216877 IGSF10Q6WRI0 2623 aa10.29□□□□□ -0.76
PTPRA-201ENST00000216877 USP24Q9UPU5 2620 aa10.29□□□□□ -0.76
PTPRA-201ENST00000216877 BPY2O14599 106 aa10.29□□□□□ -0.76
PTPRA-201ENST00000216877 IGHV4-59P01825 116 aa10.29□□□□□ -0.76
PTPRA-201ENST00000216877 FBXL19-AS1Q494R0 122 aa10.29□□□□□ -0.76
PTPRA-201ENST00000216877 NANOS2P60321 138 aaKnown RBP10.28□□□□□ -0.76
PTPRA-201ENST00000216877 K7EMT4 169 aa10.28□□□□□ -0.76
PTPRA-201ENST00000216877 K7EQD1 137 aa10.27□□□□□ -0.77
PTPRA-201ENST00000216877 Q6ZQY7 126 aa10.26□□□□□ -0.77
PTPRA-201ENST00000216877 BBC3Q96PG8 261 aaPredicted RBP10.26□□□□□ -0.77
PTPRA-201ENST00000216877 CHD6Q8TD26 2715 aa10.26□□□□□ -0.77
PTPRA-201ENST00000216877 IGLV4-60A0A075B6I1 120 aa10.26□□□□□ -0.77
PTPRA-201ENST00000216877 TRGV4A0A0C4DH28 118 aa10.25□□□□□ -0.77
PTPRA-201ENST00000216877 DEFB112Q30KQ8 113 aa10.25□□□□□ -0.77
PTPRA-201ENST00000216877 CELA1Q9UNI1 258 aa10.25□□□□□ -0.77
PTPRA-201ENST00000216877 EPM2AB3EWF7 344 aa10.25□□□□□ -0.77
PTPRA-201ENST00000216877 INSP01308 110 aa10.25□□□□□ -0.77
PTPRA-201ENST00000216877 HIGD2AQ9BW72 106 aa10.25□□□□□ -0.77
PTPRA-201ENST00000216877 NOP10Q9NPE3 64 aaKnown RBP10.25□□□□□ -0.77
PTPRA-201ENST00000216877 LMO4P61968 165 aa10.24□□□□□ -0.77
PTPRA-201ENST00000216877 C9orf116Q5BN46 136 aaPredicted RBP10.24□□□□□ -0.77
PTPRA-201ENST00000216877 ATP5EP56381 51 aaPredicted RBP10.24□□□□□ -0.77
PTPRA-201ENST00000216877 Q6ZQT0 140 aa10.24□□□□□ -0.77
PTPRA-201ENST00000216877 PRYO14603 147 aa10.23□□□□□ -0.77
PTPRA-201ENST00000216877 LINC01356Q8N9X3 169 aa10.23□□□□□ -0.77
PTPRA-201ENST00000216877 TEP1Q99973 2627 aaKnown RBP10.23□□□□□ -0.77
PTPRA-201ENST00000216877 IGLV10-54A0A075B6I4 117 aa10.23□□□□□ -0.77
PTPRA-201ENST00000216877 A0A096LPF7 62 aa10.23□□□□□ -0.77
PTPRA-201ENST00000216877 KRTAP10-9P60411 292 aa10.22□□□□□ -0.77
PTPRA-201ENST00000216877 FLNAP21333 2647 aaKnown RBP10.22□□□□□ -0.77
PTPRA-201ENST00000216877 SLURP1P55000 103 aa10.22□□□□□ -0.77
PTPRA-201ENST00000216877 ITPR3Q14573 2671 aa10.22□□□□□ -0.77
PTPRA-201ENST00000216877 SPTSSBQ8NFR3 76 aa10.21□□□□□ -0.77
PTPRA-201ENST00000216877 IGHV4-28A0A0C4DH34 117 aa10.21□□□□□ -0.78
PTPRA-201ENST00000216877 J3QKU1 62 aa10.21□□□□□ -0.78
PTPRA-201ENST00000216877 CR1P17927 2039 aa10.2□□□□□ -0.78
PTPRA-201ENST00000216877 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.2□□□□□ -0.78
PTPRA-201ENST00000216877 ZNF561-AS1K7EIQ3 104 aa10.2□□□□□ -0.78
PTPRA-201ENST00000216877 KLK9Q2XQG4 91 aa10.2□□□□□ -0.78
PTPRA-201ENST00000216877 H3BUA1 57 aa10.2□□□□□ -0.78
PTPRA-201ENST00000216877 MRPL55Q7Z7F7 128 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms