RNA–Protein interactions for RNA: ENST00000214869.6

TMED1-201, Transcript of transmembrane p24 trafficking protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED1, Length 1,340 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-201ENST00000214869 Q6ZRN7 208 aaPredicted RBP10.38□□□□□ -0.75
TMED1-201ENST00000214869 NTN5Q8WTR8 489 aaPredicted RBP10.38□□□□□ -0.75
TMED1-201ENST00000214869 C2orf48Q96LS8 159 aa10.38□□□□□ -0.75
TMED1-201ENST00000214869 DNAH10Q8IVF4 4471 aa10.38□□□□□ -0.75
TMED1-201ENST00000214869 KMT2AQ03164 3969 aa10.37□□□□□ -0.75
TMED1-201ENST00000214869 RYR2Q92736 4967 aa10.37□□□□□ -0.75
TMED1-201ENST00000214869 CKS1BP61024 79 aa10.36□□□□□ -0.75
TMED1-201ENST00000214869 LITAFQ99732 161 aa10.36□□□□□ -0.75
TMED1-201ENST00000214869 SPANXB1Q9NS25 103 aaPredicted RBP10.36□□□□□ -0.75
TMED1-201ENST00000214869 DNAH2Q9P225 4427 aa10.36□□□□□ -0.75
TMED1-201ENST00000214869 USP17L23D6RBM5 183 aa10.35□□□□□ -0.75
TMED1-201ENST00000214869 CTAG1AP78358 180 aa10.35□□□□□ -0.75
TMED1-201ENST00000214869 TAL2Q16559 108 aa10.35□□□□□ -0.75
TMED1-201ENST00000214869 LINC00587B1AMM8 73 aa10.34□□□□□ -0.75
TMED1-201ENST00000214869 ZNF561-AS1K7EIQ3 104 aa10.34□□□□□ -0.75
TMED1-201ENST00000214869 HSD52Q0P140 79 aa10.34□□□□□ -0.75
TMED1-201ENST00000214869 C2orf82Q6UX34 121 aa10.34□□□□□ -0.75
TMED1-201ENST00000214869 C6orf223Q8N319 242 aa10.34□□□□□ -0.75
TMED1-201ENST00000214869 TMEM238C9JI98 176 aa10.33□□□□□ -0.76
TMED1-201ENST00000214869 M0R2N4 97 aa10.33□□□□□ -0.76
TMED1-201ENST00000214869 CIRBPQ14011 172 aaKnown RBP10.33□□□□□ -0.76
TMED1-201ENST00000214869 Q6ZVH6 145 aa10.33□□□□□ -0.76
TMED1-201ENST00000214869 PSCAO43653 123 aa10.33□□□□□ -0.76
TMED1-201ENST00000214869 HIGD2BQ4VC39 106 aa10.33□□□□□ -0.76
TMED1-201ENST00000214869 SPANXDQ9BXN6 97 aa10.33□□□□□ -0.76
TMED1-201ENST00000214869 SPANXCQ9NY87 97 aa10.33□□□□□ -0.76
TMED1-201ENST00000214869 TRBV30A0A0K0K1B3 111 aa10.32□□□□□ -0.76
TMED1-201ENST00000214869 COX17Q14061 63 aa10.32□□□□□ -0.76
TMED1-201ENST00000214869 ADAMTSL4-AS1Q5T5F5 129 aa10.32□□□□□ -0.76
TMED1-201ENST00000214869 C10orf25Q5T742 122 aa10.32□□□□□ -0.76
TMED1-201ENST00000214869 UNQ6190/PRO20217Q6UXQ8 127 aa10.32□□□□□ -0.76
TMED1-201ENST00000214869 LINC00526Q96FQ7 95 aa10.32□□□□□ -0.76
TMED1-201ENST00000214869 LRCOL1A6NCL2 159 aa10.31□□□□□ -0.76
TMED1-201ENST00000214869 PTTG1IPP53801 180 aa10.31□□□□□ -0.76
TMED1-201ENST00000214869 C14orf177Q52M58 125 aa10.31□□□□□ -0.76
TMED1-201ENST00000214869 PPDPFQ9H3Y8 114 aa10.31□□□□□ -0.76
TMED1-201ENST00000214869 ERG28Q9UKR5 140 aa10.31□□□□□ -0.76
TMED1-201ENST00000214869 DNAH17Q9UFH2 4485 aa10.3□□□□□ -0.76
TMED1-201ENST00000214869 SMIM13P0DJ93 91 aa10.3□□□□□ -0.76
TMED1-201ENST00000214869 WFDC2Q14508 124 aa10.3□□□□□ -0.76
TMED1-201ENST00000214869 RNF151Q2KHN1 245 aa10.3□□□□□ -0.76
TMED1-201ENST00000214869 MEIG1Q5JSS6 88 aa10.3□□□□□ -0.76
TMED1-201ENST00000214869 C1orf134Q5TEV5 83 aa10.3□□□□□ -0.76
TMED1-201ENST00000214869 CAMK2N2Q96S95 79 aa10.3□□□□□ -0.76
TMED1-201ENST00000214869 HIST1H4GQ99525 98 aa10.3□□□□□ -0.76
TMED1-201ENST00000214869 M0R143 59 aa10.29□□□□□ -0.76
TMED1-201ENST00000214869 SYCNQ0VAF6 134 aa10.29□□□□□ -0.76
TMED1-201ENST00000214869 SRSF9Q13242 221 aaKnown RBP eCLIP10.29□□□□□ -0.76
TMED1-201ENST00000214869 C6orf48Q9UBA6 75 aa10.29□□□□□ -0.76
TMED1-201ENST00000214869 LCE6AA0A183 80 aa10.28□□□□□ -0.76
TMED1-201ENST00000214869 IFITM1P13164 125 aa10.28□□□□□ -0.76
TMED1-201ENST00000214869 BVES-AS1Q5T3Y7 98 aa10.28□□□□□ -0.76
TMED1-201ENST00000214869 Q6ZRU5 148 aa10.28□□□□□ -0.76
TMED1-201ENST00000214869 CEND1Q8N111 149 aa10.28□□□□□ -0.76
TMED1-201ENST00000214869 HYDINQ4G0P3 5121 aa10.27□□□□□ -0.76
TMED1-201ENST00000214869 LECT2O14960 151 aa10.27□□□□□ -0.77
TMED1-201ENST00000214869 SLPIP03973 132 aa10.27□□□□□ -0.77
TMED1-201ENST00000214869 LINC00158P58513 81 aa10.26□□□□□ -0.77
TMED1-201ENST00000214869 CNBPP62633 177 aaKnown RBP10.26□□□□□ -0.77
TMED1-201ENST00000214869 FRAS1Q86XX4 4008 aa10.25□□□□□ -0.77
TMED1-201ENST00000214869 LOC107984156A0A0G2JMH3 177 aa10.25□□□□□ -0.77
TMED1-201ENST00000214869 C9orf116Q5BN46 136 aaPredicted RBP10.25□□□□□ -0.77
TMED1-201ENST00000214869 ARL17AQ8IVW1 177 aa10.25□□□□□ -0.77
TMED1-201ENST00000214869 MIR7-3HGQ8N6C7 128 aa10.25□□□□□ -0.77
TMED1-201ENST00000214869 COPS9Q8WXC6 57 aa10.25□□□□□ -0.77
TMED1-201ENST00000214869 CARD19Q96LW7 228 aa10.25□□□□□ -0.77
TMED1-201ENST00000214869 GCSHP23434 173 aa10.24□□□□□ -0.77
TMED1-201ENST00000214869 PFN2P35080 140 aa10.24□□□□□ -0.77
TMED1-201ENST00000214869 HINT1P49773 126 aaPredicted RBP10.24□□□□□ -0.77
TMED1-201ENST00000214869 MUSTN1Q8IVN3 82 aa10.24□□□□□ -0.77
TMED1-201ENST00000214869 LINC00308Q8TCZ7 52 aa10.24□□□□□ -0.77
TMED1-201ENST00000214869 SNHG12Q9BXW3 62 aa10.24□□□□□ -0.77
TMED1-201ENST00000214869 A0A087WTM6 91 aa10.23□□□□□ -0.77
TMED1-201ENST00000214869 A0A0U1RRA0 63 aa10.23□□□□□ -0.77
TMED1-201ENST00000214869 TLX1NBP0CAT3 122 aa10.23□□□□□ -0.77
TMED1-201ENST00000214869 DAND5Q8N907 189 aa10.23□□□□□ -0.77
TMED1-201ENST00000214869 FXYD2P54710 66 aa10.22□□□□□ -0.77
TMED1-201ENST00000214869 SOSTDC1Q6X4U4 206 aa10.22□□□□□ -0.77
TMED1-201ENST00000214869 NDUFC2-KCTD14E9PQ53 114 aa10.21□□□□□ -0.78
TMED1-201ENST00000214869 EIF4EBP3O60516 100 aaPredicted RBP10.21□□□□□ -0.78
TMED1-201ENST00000214869 RPL24P83731 157 aaKnown RBP10.21□□□□□ -0.78
TMED1-201ENST00000214869 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.2□□□□□ -0.78
TMED1-201ENST00000214869 TMEM238LA0A1B0GVL6 79 aa10.2□□□□□ -0.78
TMED1-201ENST00000214869 A0A1B0GWB2 263 aa10.2□□□□□ -0.78
TMED1-201ENST00000214869 A6NJY4 79 aa10.2□□□□□ -0.78
TMED1-201ENST00000214869 EREGO14944 169 aa10.2□□□□□ -0.78
TMED1-201ENST00000214869 Q8N814 137 aa10.2□□□□□ -0.78
TMED1-201ENST00000214869 SND1-IT1Q9HBX3 110 aa10.2□□□□□ -0.78
TMED1-201ENST00000214869 RTL8CO15255 209 aa10.19□□□□□ -0.78
TMED1-201ENST00000214869 HECTD4Q9Y4D8 3996 aa10.18□□□□□ -0.78
TMED1-201ENST00000214869 A4D1N5 150 aa10.18□□□□□ -0.78
TMED1-201ENST00000214869 A6NDN8 102 aa10.17□□□□□ -0.78
TMED1-201ENST00000214869 NPC2P61916 151 aa10.16□□□□□ -0.78
TMED1-201ENST00000214869 BATFQ16520 125 aa10.16□□□□□ -0.78
TMED1-201ENST00000214869 LBHQ53QV2 105 aaPredicted RBP10.16□□□□□ -0.78
TMED1-201ENST00000214869 C9orf163Q8N9P6 203 aa10.16□□□□□ -0.78
TMED1-201ENST00000214869 FAT2Q9NYQ8 4349 aa10.16□□□□□ -0.78
TMED1-201ENST00000214869 LOC107984640A0A0U1RRK4 108 aa10.15□□□□□ -0.78
TMED1-201ENST00000214869 Q6ZRP5 223 aa10.15□□□□□ -0.78
TMED1-201ENST00000214869 PKIGQ9Y2B9 76 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms