RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 CARHSP1Q9Y2V2 147 aaKnown RBP9.56□□□□□ -0.88
PHGDH-231ENST00000641939 IGLV4-69A0A075B6H9 119 aa9.55□□□□□ -0.88
PHGDH-231ENST00000641939 IGLV4-3A0A075B6K6 122 aa9.55□□□□□ -0.88
PHGDH-231ENST00000641939 RPL37AP61513 92 aaKnown RBP9.55□□□□□ -0.88
PHGDH-231ENST00000641939 RHEBQ15382 184 aa9.55□□□□□ -0.88
PHGDH-231ENST00000641939 KIAA1644Q3SXP7 199 aa9.55□□□□□ -0.88
PHGDH-231ENST00000641939 C2orf66Q6UXQ4 117 aa9.55□□□□□ -0.88
PHGDH-231ENST00000641939 TMEM141Q96I45 108 aa9.55□□□□□ -0.88
PHGDH-231ENST00000641939 GNB1LQ9BYB4 327 aa9.55□□□□□ -0.88
PHGDH-231ENST00000641939 CYSLTR1Q9Y271 337 aa9.55□□□□□ -0.88
PHGDH-231ENST00000641939 IGHV3OR16-9A0A0B4J2B5 98 aa9.54□□□□□ -0.88
PHGDH-231ENST00000641939 IGKV2-24A0A0C4DH68 120 aa9.54□□□□□ -0.88
PHGDH-231ENST00000641939 PLAC8Q9NZF1 115 aa9.54□□□□□ -0.88
PHGDH-231ENST00000641939 A0A096LNI7 61 aa9.53□□□□□ -0.88
PHGDH-231ENST00000641939 MAJINQ3KP22 176 aa9.53□□□□□ -0.88
PHGDH-231ENST00000641939 RPS10P5Q9NQ39 176 aa9.53□□□□□ -0.88
PHGDH-231ENST00000641939 PKHD1L1Q86WI1 4243 aa9.53□□□□□ -0.88
PHGDH-231ENST00000641939 SPAG11BQ08648 103 aa9.52□□□□□ -0.89
PHGDH-231ENST00000641939 HERC1Q15751 4861 aa9.52□□□□□ -0.89
PHGDH-231ENST00000641939 COX19Q49B96 90 aa9.52□□□□□ -0.89
PHGDH-231ENST00000641939 TEX43Q6ZNM6 134 aa9.52□□□□□ -0.89
PHGDH-231ENST00000641939 Q6ZRU5 148 aa9.52□□□□□ -0.89
PHGDH-231ENST00000641939 OR10D4PQ8NGN7 298 aa9.52□□□□□ -0.89
PHGDH-231ENST00000641939 C2orf48Q96LS8 159 aa9.52□□□□□ -0.89
PHGDH-231ENST00000641939 CAMK2N2Q96S95 79 aa9.52□□□□□ -0.89
PHGDH-231ENST00000641939 LINC00474Q9P2X8 69 aa9.52□□□□□ -0.89
PHGDH-231ENST00000641939 TGIF2-C20orf24A0A0A6YYL0 155 aa9.51□□□□□ -0.89
PHGDH-231ENST00000641939 NPSP0C0P6 89 aa9.51□□□□□ -0.89
PHGDH-231ENST00000641939 Q6ZN92 141 aa9.51□□□□□ -0.89
PHGDH-231ENST00000641939 STPG4Q8N801 248 aa9.51□□□□□ -0.89
PHGDH-231ENST00000641939 ORAOV1Q8WV07 137 aa9.51□□□□□ -0.89
PHGDH-231ENST00000641939 C2orf88Q9BSF0 95 aa9.51□□□□□ -0.89
PHGDH-231ENST00000641939 G0S2P27469 103 aa9.5□□□□□ -0.89
PHGDH-231ENST00000641939 LINC00242Q5T6M2 205 aa9.5□□□□□ -0.89
PHGDH-231ENST00000641939 LRP1Q07954 4544 aaKnown RBP9.49□□□□□ -0.89
PHGDH-231ENST00000641939 LOC107984640A0A0U1RRK4 108 aa9.49□□□□□ -0.89
PHGDH-231ENST00000641939 IGIPA6NJ69 53 aa9.49□□□□□ -0.89
PHGDH-231ENST00000641939 MT-ND6P03923 174 aa9.49□□□□□ -0.89
PHGDH-231ENST00000641939 UBE2D1P51668 147 aa9.49□□□□□ -0.89
PHGDH-231ENST00000641939 AMELXQ99217 191 aa9.49□□□□□ -0.89
PHGDH-231ENST00000641939 ALKBH7Q9BT30 221 aaPredicted RBP9.49□□□□□ -0.89
PHGDH-231ENST00000641939 VCX2Q9H322 139 aa9.49□□□□□ -0.89
PHGDH-231ENST00000641939 A0A087WZ39 114 aa9.48□□□□□ -0.89
PHGDH-231ENST00000641939 F8WDY8 70 aa9.48□□□□□ -0.89
PHGDH-231ENST00000641939 ZC2HC1BQ5TFG8 222 aa9.48□□□□□ -0.89
PHGDH-231ENST00000641939 LINC00173Q6ZV60 143 aa9.48□□□□□ -0.89
PHGDH-231ENST00000641939 C7orf33Q8WU49 177 aa9.48□□□□□ -0.89
PHGDH-231ENST00000641939 TOMM6Q96B49 74 aa9.48□□□□□ -0.89
PHGDH-231ENST00000641939 MRPL18Q9H0U6 180 aaKnown RBP9.48□□□□□ -0.89
PHGDH-231ENST00000641939 J3QL48 77 aa9.47□□□□□ -0.89
PHGDH-231ENST00000641939 APOC3P02656 99 aa9.47□□□□□ -0.89
PHGDH-231ENST00000641939 PTTG1IPP53801 180 aa9.47□□□□□ -0.89
PHGDH-231ENST00000641939 FABP9Q0Z7S8 132 aa9.47□□□□□ -0.89
PHGDH-231ENST00000641939 PAPPA-AS1Q5QFB9 102 aa9.47□□□□□ -0.89
PHGDH-231ENST00000641939 TIMM17AQ99595 171 aa9.47□□□□□ -0.89
PHGDH-231ENST00000641939 FAT3Q8TDW7 4589 aa9.46□□□□□ -0.89
PHGDH-231ENST00000641939 KRTAP29-1A8MX34 341 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-231ENST00000641939 NDUFA1O15239 70 aa9.46□□□□□ -0.9
PHGDH-231ENST00000641939 GAGE2BQ13066 116 aa9.46□□□□□ -0.9
PHGDH-231ENST00000641939 NDUFA5Q16718 116 aa9.46□□□□□ -0.9
PHGDH-231ENST00000641939 RNF151Q2KHN1 245 aa9.46□□□□□ -0.9
PHGDH-231ENST00000641939 LINC01546A6NGU7 62 aa9.45□□□□□ -0.9
PHGDH-231ENST00000641939 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.45□□□□□ -0.9
PHGDH-231ENST00000641939 SNAPINO95295 136 aa9.45□□□□□ -0.9
PHGDH-231ENST00000641939 HNRNPA3P51991 378 aaKnown RBP9.45□□□□□ -0.9
PHGDH-231ENST00000641939 SVBPQ8N300 66 aa9.45□□□□□ -0.9
PHGDH-231ENST00000641939 MRPL35Q9NZE8 188 aaKnown RBP9.45□□□□□ -0.9
PHGDH-231ENST00000641939 A0A0J9YXV3 536 aa9.44□□□□□ -0.9
PHGDH-231ENST00000641939 RPL18AQ02543 176 aaKnown RBP9.44□□□□□ -0.9
PHGDH-231ENST00000641939 ERASQ7Z444 233 aa9.44□□□□□ -0.9
PHGDH-231ENST00000641939 FAM19A3Q7Z5A8 133 aa9.44□□□□□ -0.9
PHGDH-231ENST00000641939 LINC01561Q8N1V8 128 aa9.44□□□□□ -0.9
PHGDH-231ENST00000641939 LINC01549A6NIU2 74 aa9.43□□□□□ -0.9
PHGDH-231ENST00000641939 KIAA0087Q14695 138 aa9.43□□□□□ -0.9
PHGDH-231ENST00000641939 UNQ6190/PRO20217Q6UXQ8 127 aa9.43□□□□□ -0.9
PHGDH-231ENST00000641939 FA2HQ7L5A8 372 aa9.43□□□□□ -0.9
PHGDH-231ENST00000641939 SCGB3A1Q96QR1 104 aa9.43□□□□□ -0.9
PHGDH-231ENST00000641939 OXTP01178 125 aa9.42□□□□□ -0.9
PHGDH-231ENST00000641939 SEC11AP67812 179 aa9.42□□□□□ -0.9
PHGDH-231ENST00000641939 C10orf25Q5T742 122 aa9.42□□□□□ -0.9
PHGDH-231ENST00000641939 SMCO4Q9NRQ5 59 aa9.42□□□□□ -0.9
PHGDH-231ENST00000641939 TRAPPC1Q9Y5R8 145 aa9.42□□□□□ -0.9
PHGDH-231ENST00000641939 HERVK_113P63121 156 aa9.41□□□□□ -0.9
PHGDH-231ENST00000641939 C6orf48Q9UBA6 75 aa9.41□□□□□ -0.9
PHGDH-231ENST00000641939 GEMIN7Q9H840 131 aaKnown RBP9.4□□□□□ -0.9
PHGDH-231ENST00000641939 TRBV30A0A0K0K1B3 111 aa9.39□□□□□ -0.91
PHGDH-231ENST00000641939 A0A1W2PNN7 141 aa9.39□□□□□ -0.91
PHGDH-231ENST00000641939 TLX1NBP0CAT3 122 aa9.39□□□□□ -0.91
PHGDH-231ENST00000641939 PRR3P79522 188 aaKnown RBP9.39□□□□□ -0.91
PHGDH-231ENST00000641939 CDKN2A-AS1Q9UH64 79 aa9.39□□□□□ -0.91
PHGDH-231ENST00000641939 PRSS2P07478 247 aa9.38□□□□□ -0.91
PHGDH-231ENST00000641939 C9orf116Q5BN46 136 aaPredicted RBP9.38□□□□□ -0.91
PHGDH-231ENST00000641939 C2orf82Q6UX34 121 aa9.38□□□□□ -0.91
PHGDH-231ENST00000641939 C18orf32Q8TCD1 76 aa9.38□□□□□ -0.91
PHGDH-231ENST00000641939 Q6ZRP5 223 aa9.37□□□□□ -0.91
PHGDH-231ENST00000641939 Q8IZM0 81 aa9.37□□□□□ -0.91
PHGDH-231ENST00000641939 PACRGQ96M98 296 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-231ENST00000641939 CST9LQ9H4G1 147 aa9.37□□□□□ -0.91
PHGDH-231ENST00000641939 TOMM7Q9P0U1 55 aa9.37□□□□□ -0.91
PHGDH-231ENST00000641939 TINCRA0A1B0GVN0 87 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms