RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 SEC11AP67812 179 aa11.71□□□□□ -0.53
PHGDH-230ENST00000641927 CDPF1Q6NVV7 123 aa11.71□□□□□ -0.53
PHGDH-230ENST00000641927 CHAC1Q9BUX1 264 aa11.71□□□□□ -0.53
PHGDH-230ENST00000641927 LCE6AA0A183 80 aa11.71□□□□□ -0.54
PHGDH-230ENST00000641927 COX6A2Q02221 97 aa11.71□□□□□ -0.54
PHGDH-230ENST00000641927 LINC01545Q5VT33 79 aa11.71□□□□□ -0.54
PHGDH-230ENST00000641927 RMI2Q96E14 147 aa11.71□□□□□ -0.54
PHGDH-230ENST00000641927 TINCRA0A1B0GVN0 87 aa11.7□□□□□ -0.54
PHGDH-230ENST00000641927 GAGE12HA6NDE8 117 aa11.7□□□□□ -0.54
PHGDH-230ENST00000641927 C11orf86A6NJI1 115 aa11.69□□□□□ -0.54
PHGDH-230ENST00000641927 IGLC3P0DOY3 106 aa11.69□□□□□ -0.54
PHGDH-230ENST00000641927 HERVK_113P63121 156 aa11.69□□□□□ -0.54
PHGDH-230ENST00000641927 KMT2AQ03164 3969 aa11.69□□□□□ -0.54
PHGDH-230ENST00000641927 DPM2O94777 84 aa11.68□□□□□ -0.54
PHGDH-230ENST00000641927 PLNP26678 52 aa11.68□□□□□ -0.54
PHGDH-230ENST00000641927 CD164L2Q6UWJ8 174 aa11.68□□□□□ -0.54
PHGDH-230ENST00000641927 Q6ZR54 194 aa11.68□□□□□ -0.54
PHGDH-230ENST00000641927 FAM19A3Q7Z5A8 133 aa11.68□□□□□ -0.54
PHGDH-230ENST00000641927 LINC00469Q8N7U9 141 aa11.68□□□□□ -0.54
PHGDH-230ENST00000641927 IGKCP01834 107 aa11.68□□□□□ -0.54
PHGDH-230ENST00000641927 TMEM170BQ5T4T1 132 aa11.68□□□□□ -0.54
PHGDH-230ENST00000641927 NFE4Q86UQ8 179 aa11.68□□□□□ -0.54
PHGDH-230ENST00000641927 PSCAO43653 123 aa11.67□□□□□ -0.54
PHGDH-230ENST00000641927 C5orf38Q86SI9 138 aa11.67□□□□□ -0.54
PHGDH-230ENST00000641927 ATOH7Q8N100 152 aa11.66□□□□□ -0.54
PHGDH-230ENST00000641927 TM2D2Q9BX73 214 aa11.66□□□□□ -0.54
PHGDH-230ENST00000641927 CDKN2A-AS1Q9UH64 79 aa11.66□□□□□ -0.54
PHGDH-230ENST00000641927 IGHV3OR16-9A0A0B4J2B5 98 aa11.65□□□□□ -0.54
PHGDH-230ENST00000641927 FOXI1Q12951 378 aa11.65□□□□□ -0.54
PHGDH-230ENST00000641927 C6orf223Q8N319 242 aa11.65□□□□□ -0.54
PHGDH-230ENST00000641927 COX11Q9Y6N1 276 aa11.65□□□□□ -0.54
PHGDH-230ENST00000641927 COX7A2LO14548 114 aa11.65□□□□□ -0.55
PHGDH-230ENST00000641927 MALP21145 153 aa11.65□□□□□ -0.55
PHGDH-230ENST00000641927 DNAH6Q9C0G6 4158 aa11.64□□□□□ -0.55
PHGDH-230ENST00000641927 LINC00587B1AMM8 73 aa11.64□□□□□ -0.55
PHGDH-230ENST00000641927 H3BRM9 83 aa11.64□□□□□ -0.55
PHGDH-230ENST00000641927 ZNF22P17026 224 aaPredicted RBP11.64□□□□□ -0.55
PHGDH-230ENST00000641927 C1orf134Q5TEV5 83 aa11.64□□□□□ -0.55
PHGDH-230ENST00000641927 KRTAP26-1Q6PEX3 210 aa11.64□□□□□ -0.55
PHGDH-230ENST00000641927 HYDINQ4G0P3 5121 aa11.63□□□□□ -0.55
PHGDH-230ENST00000641927 IGLV5-45A0A087WSX0 123 aa11.62□□□□□ -0.55
PHGDH-230ENST00000641927 VAMP8Q9BV40 100 aa11.62□□□□□ -0.55
PHGDH-230ENST00000641927 A0A087WZ39 114 aa11.62□□□□□ -0.55
PHGDH-230ENST00000641927 SPINK8P0C7L1 97 aa11.62□□□□□ -0.55
PHGDH-230ENST00000641927 IGHV3-64A0A075B6Q5 118 aa11.61□□□□□ -0.55
PHGDH-230ENST00000641927 SACSQ9NZJ4 4579 aa11.61□□□□□ -0.55
PHGDH-230ENST00000641927 MAPKAPK5-AS1Q8N8E1 139 aa11.6□□□□□ -0.55
PHGDH-230ENST00000641927 Q6ZRN7 208 aaPredicted RBP11.59□□□□□ -0.55
PHGDH-230ENST00000641927 STPG4Q8N801 248 aa11.59□□□□□ -0.55
PHGDH-230ENST00000641927 PAM16Q9Y3D7 125 aa11.59□□□□□ -0.55
PHGDH-230ENST00000641927 hDV102S1A0JD36 115 aa11.58□□□□□ -0.56
PHGDH-230ENST00000641927 TMEM223A0PJW6 202 aa11.58□□□□□ -0.56
PHGDH-230ENST00000641927 LECT2O14960 151 aa11.58□□□□□ -0.56
PHGDH-230ENST00000641927 APOMO95445 188 aa11.58□□□□□ -0.56
PHGDH-230ENST00000641927 HERVK_113P61574 105 aa11.58□□□□□ -0.56
PHGDH-230ENST00000641927 SMIM1B2RUZ4 78 aa11.57□□□□□ -0.56
PHGDH-230ENST00000641927 DNAH10Q8IVF4 4471 aa11.57□□□□□ -0.56
PHGDH-230ENST00000641927 HSBP1L1C9JCN9 74 aa11.56□□□□□ -0.56
PHGDH-230ENST00000641927 TSTD3H0UI37 97 aa11.56□□□□□ -0.56
PHGDH-230ENST00000641927 MAJINQ3KP22 176 aa11.56□□□□□ -0.56
PHGDH-230ENST00000641927 ORAOV1Q8WV07 137 aa11.56□□□□□ -0.56
PHGDH-230ENST00000641927 TOMM7Q9P0U1 55 aa11.56□□□□□ -0.56
PHGDH-230ENST00000641927 IGHV1-58A0A0C4DH39 117 aa11.55□□□□□ -0.56
PHGDH-230ENST00000641927 USP17L23D6RBM5 183 aa11.55□□□□□ -0.56
PHGDH-230ENST00000641927 SPATA45Q537H7 98 aa11.55□□□□□ -0.56
PHGDH-230ENST00000641927 CFAP161Q6P656 301 aa11.55□□□□□ -0.56
PHGDH-230ENST00000641927 LINC01561Q8N1V8 128 aa11.55□□□□□ -0.56
PHGDH-230ENST00000641927 KMT2CQ8NEZ4 4911 aaKnown RBP11.55□□□□□ -0.56
PHGDH-230ENST00000641927 HIGD2BQ4VC39 106 aa11.55□□□□□ -0.56
PHGDH-230ENST00000641927 C15orf56Q8N910 161 aa11.54□□□□□ -0.56
PHGDH-230ENST00000641927 PRO1933Q9H354 126 aa11.54□□□□□ -0.56
PHGDH-230ENST00000641927 PRSS2P07478 247 aa11.53□□□□□ -0.56
PHGDH-230ENST00000641927 DNAH2Q9P225 4427 aa11.53□□□□□ -0.56
PHGDH-230ENST00000641927 ZNF561-AS1K7EIQ3 104 aa11.52□□□□□ -0.56
PHGDH-230ENST00000641927 SPAG11BQ08648 103 aa11.52□□□□□ -0.56
PHGDH-230ENST00000641927 WFDC2Q14508 124 aa11.52□□□□□ -0.56
PHGDH-230ENST00000641927 LINC00526Q96FQ7 95 aa11.52□□□□□ -0.56
PHGDH-230ENST00000641927 IGLV5-39A0A0G2JS06 123 aa11.52□□□□□ -0.57
PHGDH-230ENST00000641927 ANKRD39Q53RE8 183 aa11.52□□□□□ -0.57
PHGDH-230ENST00000641927 COX7B2Q8TF08 81 aa11.52□□□□□ -0.57
PHGDH-230ENST00000641927 E9PLD3 99 aa11.51□□□□□ -0.57
PHGDH-230ENST00000641927 RTL8CO15255 209 aa11.51□□□□□ -0.57
PHGDH-230ENST00000641927 C6orf226Q5I0X4 101 aa11.51□□□□□ -0.57
PHGDH-230ENST00000641927 RYR2Q92736 4967 aa11.5□□□□□ -0.57
PHGDH-230ENST00000641927 LRCOL1A6NCL2 159 aa11.5□□□□□ -0.57
PHGDH-230ENST00000641927 LEPROTO15243 131 aa11.5□□□□□ -0.57
PHGDH-230ENST00000641927 NMUP48645 174 aa11.5□□□□□ -0.57
PHGDH-230ENST00000641927 GVQW2A0A096LPI5 108 aaPredicted RBP11.49□□□□□ -0.57
PHGDH-230ENST00000641927 Q8IZM0 81 aa11.49□□□□□ -0.57
PHGDH-230ENST00000641927 PLEKHB2Q96CS7 222 aa11.49□□□□□ -0.57
PHGDH-230ENST00000641927 A0A087WTM6 91 aa11.49□□□□□ -0.57
PHGDH-230ENST00000641927 IGKV2D-26A0A0A0MRZ7 120 aa11.49□□□□□ -0.57
PHGDH-230ENST00000641927 LGALS3P17931 250 aaKnown RBP11.49□□□□□ -0.57
PHGDH-230ENST00000641927 J3QQQ9 107 aa11.48□□□□□ -0.57
PHGDH-230ENST00000641927 CKS1BP61024 79 aa11.48□□□□□ -0.57
PHGDH-230ENST00000641927 TNP2Q05952 138 aa11.48□□□□□ -0.57
PHGDH-230ENST00000641927 C14orf177Q52M58 125 aa11.48□□□□□ -0.57
PHGDH-230ENST00000641927 TSPEAR-AS2P59090 65 aa11.47□□□□□ -0.57
PHGDH-230ENST00000641927 KIAA0087Q14695 138 aa11.47□□□□□ -0.57
PHGDH-230ENST00000641927 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms