RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 hDV102S1A0JD36 115 aa13.35□□□□□ -0.27
PHGDH-210ENST00000641115 H3BRM9 83 aa13.35□□□□□ -0.27
PHGDH-210ENST00000641115 S100A12P80511 92 aa13.35□□□□□ -0.27
PHGDH-210ENST00000641115 TTC32Q5I0X7 151 aa13.35□□□□□ -0.27
PHGDH-210ENST00000641115 CDKN2A-AS1Q9UH64 79 aa13.35□□□□□ -0.27
PHGDH-210ENST00000641115 TENM2Q9NT68 2774 aa13.35□□□□□ -0.27
PHGDH-210ENST00000641115 CD164L2Q6UWJ8 174 aa13.34□□□□□ -0.27
PHGDH-210ENST00000641115 C12orf57Q99622 126 aa13.34□□□□□ -0.27
PHGDH-210ENST00000641115 Q9HAA7 133 aa13.34□□□□□ -0.27
PHGDH-210ENST00000641115 HERVK_113P61574 105 aa13.33□□□□□ -0.28
PHGDH-210ENST00000641115 STPG4Q8N801 248 aa13.33□□□□□ -0.28
PHGDH-210ENST00000641115 C1orf43Q9BWL3 253 aa13.33□□□□□ -0.28
PHGDH-210ENST00000641115 IGHV3OR16-9A0A0B4J2B5 98 aa13.32□□□□□ -0.28
PHGDH-210ENST00000641115 LY6G6CO95867 125 aa13.32□□□□□ -0.28
PHGDH-210ENST00000641115 MAJINQ3KP22 176 aa13.32□□□□□ -0.28
PHGDH-210ENST00000641115 PAM16Q9Y3D7 125 aa13.32□□□□□ -0.28
PHGDH-210ENST00000641115 LINC00476Q8WZB0 136 aa13.31□□□□□ -0.28
PHGDH-210ENST00000641115 PLECQ15149 4684 aaKnown RBP13.31□□□□□ -0.28
PHGDH-210ENST00000641115 NBDYA0A0U1RRE5 68 aa13.31□□□□□ -0.28
PHGDH-210ENST00000641115 RMI2Q96E14 147 aa13.31□□□□□ -0.28
PHGDH-210ENST00000641115 KRTAP1-5Q9BYS1 174 aa13.31□□□□□ -0.28
PHGDH-210ENST00000641115 IGKV2D-24A0A075B6R9 120 aa13.3□□□□□ -0.28
PHGDH-210ENST00000641115 TMEM223A0PJW6 202 aa13.3□□□□□ -0.28
PHGDH-210ENST00000641115 GAGE12HA6NDE8 117 aa13.3□□□□□ -0.28
PHGDH-210ENST00000641115 LINC00518Q8N0U6 118 aa13.3□□□□□ -0.28
PHGDH-210ENST00000641115 A0A087WZ39 114 aa13.29□□□□□ -0.28
PHGDH-210ENST00000641115 COX7A2LO14548 114 aa13.29□□□□□ -0.28
PHGDH-210ENST00000641115 FOXI1Q12951 378 aa13.29□□□□□ -0.28
PHGDH-210ENST00000641115 C5orf38Q86SI9 138 aa13.29□□□□□ -0.28
PHGDH-210ENST00000641115 SPATA45Q537H7 98 aa13.28□□□□□ -0.28
PHGDH-210ENST00000641115 LYSTQ99698 3801 aa13.28□□□□□ -0.28
PHGDH-210ENST00000641115 SPINK8P0C7L1 97 aa13.28□□□□□ -0.28
PHGDH-210ENST00000641115 ANKRD39Q53RE8 183 aa13.28□□□□□ -0.28
PHGDH-210ENST00000641115 IGHV3-64A0A075B6Q5 118 aa13.27□□□□□ -0.29
PHGDH-210ENST00000641115 E9PLD3 99 aa13.27□□□□□ -0.29
PHGDH-210ENST00000641115 MALP21145 153 aa13.27□□□□□ -0.29
PHGDH-210ENST00000641115 SMIM1B2RUZ4 78 aa13.26□□□□□ -0.29
PHGDH-210ENST00000641115 IGHV1-58A0A0C4DH39 117 aa13.25□□□□□ -0.29
PHGDH-210ENST00000641115 LINC01561Q8N1V8 128 aa13.25□□□□□ -0.29
PHGDH-210ENST00000641115 COX11Q9Y6N1 276 aa13.25□□□□□ -0.29
PHGDH-210ENST00000641115 NMUP48645 174 aa13.24□□□□□ -0.29
PHGDH-210ENST00000641115 KRTAP26-1Q6PEX3 210 aa13.24□□□□□ -0.29
PHGDH-210ENST00000641115 IGKV2D-26A0A0A0MRZ7 120 aa13.23□□□□□ -0.29
PHGDH-210ENST00000641115 M0R2N4 97 aa13.23□□□□□ -0.29
PHGDH-210ENST00000641115 TM2D2Q9BX73 214 aa13.23□□□□□ -0.29
PHGDH-210ENST00000641115 LEPROTO15243 131 aa13.22□□□□□ -0.29
PHGDH-210ENST00000641115 APOMO95445 188 aa13.22□□□□□ -0.29
PHGDH-210ENST00000641115 PLEKHB2Q96CS7 222 aa13.22□□□□□ -0.29
PHGDH-210ENST00000641115 IGLV5-39A0A0G2JS06 123 aa13.21□□□□□ -0.29
PHGDH-210ENST00000641115 LGALS3P17931 250 aaKnown RBP13.21□□□□□ -0.3
PHGDH-210ENST00000641115 J3QQQ9 107 aa13.2□□□□□ -0.3
PHGDH-210ENST00000641115 PSCAO43653 123 aa13.19□□□□□ -0.3
PHGDH-210ENST00000641115 Q6ZR54 194 aa13.19□□□□□ -0.3
PHGDH-210ENST00000641115 ORAOV1Q8WV07 137 aa13.19□□□□□ -0.3
PHGDH-210ENST00000641115 TOMM7Q9P0U1 55 aa13.19□□□□□ -0.3
PHGDH-210ENST00000641115 PRSS2P07478 247 aa13.17□□□□□ -0.3
PHGDH-210ENST00000641115 TSPEAR-AS2P59090 65 aa13.17□□□□□ -0.3
PHGDH-210ENST00000641115 COX7B2Q8TF08 81 aa13.17□□□□□ -0.3
PHGDH-210ENST00000641115 C14orf144Q96I85 54 aa13.17□□□□□ -0.3
PHGDH-210ENST00000641115 COX8AP10176 69 aa13.16□□□□□ -0.3
PHGDH-210ENST00000641115 CFAP161Q6P656 301 aa13.16□□□□□ -0.3
PHGDH-210ENST00000641115 PCP2Q8IVA1 136 aa13.16□□□□□ -0.3
PHGDH-210ENST00000641115 Q8IZM0 81 aa13.16□□□□□ -0.3
PHGDH-210ENST00000641115 TTTY13Q9BZ97 58 aa13.15□□□□□ -0.3
PHGDH-210ENST00000641115 PRO1933Q9H354 126 aa13.15□□□□□ -0.3
PHGDH-210ENST00000641115 DNAH1Q9P2D7 4330 aa13.15□□□□□ -0.3
PHGDH-210ENST00000641115 TSTD3H0UI37 97 aa13.14□□□□□ -0.31
PHGDH-210ENST00000641115 SPAG11BQ08648 103 aa13.14□□□□□ -0.31
PHGDH-210ENST00000641115 C6orf223Q8N319 242 aa13.14□□□□□ -0.31
PHGDH-210ENST00000641115 MAPKAPK5-AS1Q8N8E1 139 aa13.14□□□□□ -0.31
PHGDH-210ENST00000641115 ZNF815PA8K554 130 aa13.13□□□□□ -0.31
PHGDH-210ENST00000641115 C6orf226Q5I0X4 101 aa13.13□□□□□ -0.31
PHGDH-210ENST00000641115 VPS13DQ5THJ4 4388 aa13.13□□□□□ -0.31
PHGDH-210ENST00000641115 MYMXA0A1B0GTQ4 84 aa13.13□□□□□ -0.31
PHGDH-210ENST00000641115 SLC25A34Q6PIV7 304 aa13.13□□□□□ -0.31
PHGDH-210ENST00000641115 C15orf56Q8N910 161 aa13.13□□□□□ -0.31
PHGDH-210ENST00000641115 NDUFA12Q9UI09 145 aa13.13□□□□□ -0.31
PHGDH-210ENST00000641115 BOD1L2Q8IYS8 172 aa13.12□□□□□ -0.31
PHGDH-210ENST00000641115 LCE6AA0A183 80 aa13.11□□□□□ -0.31
PHGDH-210ENST00000641115 USP17L23D6RBM5 183 aa13.11□□□□□ -0.31
PHGDH-210ENST00000641115 ZNF561-AS1K7EIQ3 104 aa13.11□□□□□ -0.31
PHGDH-210ENST00000641115 CKS1BP61024 79 aa13.11□□□□□ -0.31
PHGDH-210ENST00000641115 HIGD2BQ4VC39 106 aa13.11□□□□□ -0.31
PHGDH-210ENST00000641115 C1orf134Q5TEV5 83 aa13.11□□□□□ -0.31
PHGDH-210ENST00000641115 Q6ZRN7 208 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-210ENST00000641115 UQCR10Q9UDW1 63 aa13.11□□□□□ -0.31
PHGDH-210ENST00000641115 NDUFA1O15239 70 aa13.1□□□□□ -0.31
PHGDH-210ENST00000641115 DLEU1O43261 78 aa13.1□□□□□ -0.31
PHGDH-210ENST00000641115 CXCL5P42830 114 aa13.1□□□□□ -0.31
PHGDH-210ENST00000641115 KIAA0087Q14695 138 aa13.1□□□□□ -0.31
PHGDH-210ENST00000641115 SFTA2Q6UW10 78 aa13.1□□□□□ -0.31
PHGDH-210ENST00000641115 GVQW2A0A096LPI5 108 aaPredicted RBP13.1□□□□□ -0.31
PHGDH-210ENST00000641115 TP73-AS1Q9UF72 201 aa13.1□□□□□ -0.31
PHGDH-210ENST00000641115 ALMS1Q8TCU4 4167 aa13.09□□□□□ -0.31
PHGDH-210ENST00000641115 ZNF625Q96I27 306 aaPredicted RBP13.09□□□□□ -0.31
PHGDH-210ENST00000641115 LECT2O14960 151 aa13.08□□□□□ -0.32
PHGDH-210ENST00000641115 SCGB1D4Q6XE38 83 aa13.08□□□□□ -0.32
PHGDH-210ENST00000641115 LINC00526Q96FQ7 95 aa13.07□□□□□ -0.32
PHGDH-210ENST00000641115 MIEN1Q9BRT3 115 aa13.07□□□□□ -0.32
PHGDH-210ENST00000641115 HERV-K104P63124 156 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms