RNA–Protein interactions for RNA: ENST00000638400.1

GFAP-227, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,106 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-227ENST00000638400 SPANXB1Q9NS25 103 aaPredicted RBP8.62□□□□□ -1.03
GFAP-227ENST00000638400 IGLV4-69A0A075B6H9 119 aa8.61□□□□□ -1.03
GFAP-227ENST00000638400 K7EQD1 137 aa8.61□□□□□ -1.03
GFAP-227ENST00000638400 CRYGDP07320 174 aa8.61□□□□□ -1.03
GFAP-227ENST00000638400 GYPEP15421 78 aa8.61□□□□□ -1.03
GFAP-227ENST00000638400 HIST1H4GQ99525 98 aa8.61□□□□□ -1.03
GFAP-227ENST00000638400 NHP2Q9NX24 153 aaKnown RBP8.61□□□□□ -1.03
GFAP-227ENST00000638400 KIAA1109Q2LD37 5005 aa8.6□□□□□ -1.03
GFAP-227ENST00000638400 LYPD5Q6UWN5 251 aa8.6□□□□□ -1.03
GFAP-227ENST00000638400 TTTY13Q9BZ97 58 aa8.6□□□□□ -1.03
GFAP-227ENST00000638400 PKD1P98161 4303 aa8.6□□□□□ -1.03
GFAP-227ENST00000638400 DYNC1H1Q14204 4646 aaKnown RBP8.6□□□□□ -1.03
GFAP-227ENST00000638400 ZNF815PA8K554 130 aa8.59□□□□□ -1.03
GFAP-227ENST00000638400 F5H697 171 aa8.59□□□□□ -1.03
GFAP-227ENST00000638400 RS1O15537 224 aa8.59□□□□□ -1.03
GFAP-227ENST00000638400 CIDEAO60543 219 aa8.59□□□□□ -1.03
GFAP-227ENST00000638400 TSHBP01222 138 aa8.59□□□□□ -1.03
GFAP-227ENST00000638400 TNP2Q05952 138 aa8.59□□□□□ -1.03
GFAP-227ENST00000638400 ZNF56Q15929 161 aa8.59□□□□□ -1.03
GFAP-227ENST00000638400 LYRM7Q5U5X0 104 aa8.59□□□□□ -1.03
GFAP-227ENST00000638400 CFAP126Q5VTH2 177 aa8.59□□□□□ -1.03
GFAP-227ENST00000638400 SH2D6Q7Z4S9 175 aa8.59□□□□□ -1.03
GFAP-227ENST00000638400 RAB37Q96AX2 223 aa8.59□□□□□ -1.03
GFAP-227ENST00000638400 PYGO1Q9Y3Y4 419 aa8.59□□□□□ -1.03
GFAP-227ENST00000638400 A8MWV9 139 aa8.58□□□□□ -1.04
GFAP-227ENST00000638400 F8W1H4 67 aa8.58□□□□□ -1.04
GFAP-227ENST00000638400 I3L3M4 83 aa8.58□□□□□ -1.04
GFAP-227ENST00000638400 RHODO00212 210 aa8.58□□□□□ -1.04
GFAP-227ENST00000638400 A0A087WWL8 130 aa8.57□□□□□ -1.04
GFAP-227ENST00000638400 LOC100131303A0A0U1RQF7 123 aa8.57□□□□□ -1.04
GFAP-227ENST00000638400 UBE2D1P51668 147 aa8.57□□□□□ -1.04
GFAP-227ENST00000638400 C20orf203Q8NBC4 194 aa8.57□□□□□ -1.04
GFAP-227ENST00000638400 KRTAP17-1Q9BYP8 105 aa8.57□□□□□ -1.04
GFAP-227ENST00000638400 TRBV6-4A0A1B0GX49 114 aa8.56□□□□□ -1.04
GFAP-227ENST00000638400 SLC25A29Q8N8R3 303 aa8.56□□□□□ -1.04
GFAP-227ENST00000638400 PLEKHB2Q96CS7 222 aa8.56□□□□□ -1.04
GFAP-227ENST00000638400 DNAJC30Q96LL9 226 aa8.56□□□□□ -1.04
GFAP-227ENST00000638400 VPS25Q9BRG1 176 aa8.56□□□□□ -1.04
GFAP-227ENST00000638400 JPT2Q9H910 190 aa8.56□□□□□ -1.04
GFAP-227ENST00000638400 IGHV3-73A0A0B4J1V6 119 aa8.55□□□□□ -1.04
GFAP-227ENST00000638400 K7ERJ3 54 aa8.55□□□□□ -1.04
GFAP-227ENST00000638400 LEPROTO15243 131 aa8.55□□□□□ -1.04
GFAP-227ENST00000638400 PCP4P48539 62 aa8.55□□□□□ -1.04
GFAP-227ENST00000638400 TIRAPP58753 221 aa8.55□□□□□ -1.04
GFAP-227ENST00000638400 SCGB1D4Q6XE38 83 aa8.55□□□□□ -1.04
GFAP-227ENST00000638400 WFDC10BQ8IUB3 73 aa8.55□□□□□ -1.04
GFAP-227ENST00000638400 J3QR89 54 aa8.54□□□□□ -1.04
GFAP-227ENST00000638400 RNF151Q2KHN1 245 aa8.54□□□□□ -1.04
GFAP-227ENST00000638400 FAM74A4Q5TZK3 123 aa8.54□□□□□ -1.04
GFAP-227ENST00000638400 SPANXA1Q9NS26 97 aa8.54□□□□□ -1.04
GFAP-227ENST00000638400 TMEM223A0PJW6 202 aa8.53□□□□□ -1.04
GFAP-227ENST00000638400 DNAH10OSP0CZ25 163 aa8.53□□□□□ -1.04
GFAP-227ENST00000638400 RPL39P62891 51 aaKnown RBP8.53□□□□□ -1.04
GFAP-227ENST00000638400 PCLOQ9Y6V0 5065 aa8.52□□□□□ -1.05
GFAP-227ENST00000638400 IGLV4-3A0A075B6K6 122 aa8.52□□□□□ -1.05
GFAP-227ENST00000638400 C16orf90A8MZG2 172 aa8.52□□□□□ -1.05
GFAP-227ENST00000638400 J3QQQ9 107 aa8.52□□□□□ -1.05
GFAP-227ENST00000638400 LGALS3P17931 250 aaKnown RBP8.52□□□□□ -1.05
GFAP-227ENST00000638400 SRSF9Q13242 221 aaKnown RBP eCLIP8.52□□□□□ -1.05
GFAP-227ENST00000638400 ATP6V0E2Q8NHE4 81 aa8.52□□□□□ -1.05
GFAP-227ENST00000638400 AMELXQ99217 191 aa8.52□□□□□ -1.05
GFAP-227ENST00000638400 NAA38Q9BRA0 125 aaKnown RBP8.52□□□□□ -1.05
GFAP-227ENST00000638400 TMEM170BQ5T4T1 132 aa8.51□□□□□ -1.05
GFAP-227ENST00000638400 Q6ZRN7 208 aaPredicted RBP8.51□□□□□ -1.05
GFAP-227ENST00000638400 Q6ZSN1 163 aa8.51□□□□□ -1.05
GFAP-227ENST00000638400 C10orf126Q8N4M7 172 aa8.51□□□□□ -1.05
GFAP-227ENST00000638400 VCX2Q9H322 139 aa8.51□□□□□ -1.05
GFAP-227ENST00000638400 TRBV20-1A0A075B6N2 111 aa8.5□□□□□ -1.05
GFAP-227ENST00000638400 IGHV3-30P01768 117 aa8.5□□□□□ -1.05
GFAP-227ENST00000638400 IGHV3-30-5P0DP03 117 aa8.5□□□□□ -1.05
GFAP-227ENST00000638400 ZNF22P17026 224 aaPredicted RBP8.5□□□□□ -1.05
GFAP-227ENST00000638400 RYR1P21817 5038 aa8.5□□□□□ -1.05
GFAP-227ENST00000638400 UBE2D3P61077 147 aa8.5□□□□□ -1.05
GFAP-227ENST00000638400 UBE2D2P62837 147 aa8.5□□□□□ -1.05
GFAP-227ENST00000638400 MRPS36P82909 103 aaKnown RBP8.5□□□□□ -1.05
GFAP-227ENST00000638400 TIMM21Q9BVV7 248 aa8.5□□□□□ -1.05
GFAP-227ENST00000638400 TNFRSF18Q9Y5U5 241 aa8.5□□□□□ -1.05
GFAP-227ENST00000638400 IGHV3-38A0A0C4DH36 116 aa8.49□□□□□ -1.05
GFAP-227ENST00000638400 TMEM238C9JI98 176 aa8.49□□□□□ -1.05
GFAP-227ENST00000638400 LINC00694P0DN24 101 aa8.49□□□□□ -1.05
GFAP-227ENST00000638400 COTL1Q14019 142 aa8.49□□□□□ -1.05
GFAP-227ENST00000638400 GAGE13Q4V321 117 aa8.49□□□□□ -1.05
GFAP-227ENST00000638400 LINC01556Q5JQF7 62 aa8.49□□□□□ -1.05
GFAP-227ENST00000638400 LELP1Q5T871 98 aa8.49□□□□□ -1.05
GFAP-227ENST00000638400 GTSF1LQ9H1H1 148 aa8.49□□□□□ -1.05
GFAP-227ENST00000638400 PGPEP1Q9NXJ5 209 aa8.49□□□□□ -1.05
GFAP-227ENST00000638400 PRO0461Q9UI25 63 aa8.49□□□□□ -1.05
GFAP-227ENST00000638400 A0A0B4J2C4 111 aa8.48□□□□□ -1.05
GFAP-227ENST00000638400 GAGE12JA6NER3 117 aa8.48□□□□□ -1.05
GFAP-227ENST00000638400 M0QXV9 152 aa8.48□□□□□ -1.05
GFAP-227ENST00000638400 TSPEAR-AS2P59090 65 aa8.48□□□□□ -1.05
GFAP-227ENST00000638400 GAGE4Q13068 117 aa8.48□□□□□ -1.05
GFAP-227ENST00000638400 GAGE5Q13069 117 aa8.48□□□□□ -1.05
GFAP-227ENST00000638400 LRP1BQ9NZR2 4599 aa8.47□□□□□ -1.05
GFAP-227ENST00000638400 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.47□□□□□ -1.05
GFAP-227ENST00000638400 TINCRA0A1B0GVN0 87 aa8.47□□□□□ -1.05
GFAP-227ENST00000638400 RPL24P83731 157 aaKnown RBP8.47□□□□□ -1.05
GFAP-227ENST00000638400 SMAGPQ0VAQ4 97 aa8.47□□□□□ -1.05
GFAP-227ENST00000638400 TRBV10-1A0A0K0K1A3 114 aa8.46□□□□□ -1.06
GFAP-227ENST00000638400 TIMM17BO60830 172 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms