RNA–Protein interactions for RNA: ENST00000638175.1

SCARB2-206, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-206ENST00000638175 C20orf203Q8NBC4 194 aa4.13□□□□□ -1.75
SCARB2-206ENST00000638175 TMEM101Q96IK0 257 aa4.13□□□□□ -1.75
SCARB2-206ENST00000638175 NXT2Q9NPJ8 142 aaKnown RBP4.13□□□□□ -1.75
SCARB2-206ENST00000638175 CSDC2Q9Y534 153 aaKnown RBP4.13□□□□□ -1.75
SCARB2-206ENST00000638175 IGLV4-60A0A075B6I1 120 aa4.12□□□□□ -1.75
SCARB2-206ENST00000638175 IGKV2D-24A0A075B6R9 120 aa4.12□□□□□ -1.75
SCARB2-206ENST00000638175 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.12□□□□□ -1.75
SCARB2-206ENST00000638175 TGIF2-C20orf24A0A0A6YYL0 155 aa4.12□□□□□ -1.75
SCARB2-206ENST00000638175 TRAV8-4A0A0B4J246 113 aa4.12□□□□□ -1.75
SCARB2-206ENST00000638175 A0A1B0GVY2 172 aa4.12□□□□□ -1.75
SCARB2-206ENST00000638175 IGKV2-29A2NJV5 120 aaPredicted RBP4.12□□□□□ -1.75
SCARB2-206ENST00000638175 SMIM1B2RUZ4 78 aa4.12□□□□□ -1.75
SCARB2-206ENST00000638175 G0S2P27469 103 aa4.12□□□□□ -1.75
SCARB2-206ENST00000638175 ORMDL2Q53FV1 153 aa4.12□□□□□ -1.75
SCARB2-206ENST00000638175 RNASEKQ6P5S7 137 aaKnown RBP4.12□□□□□ -1.75
SCARB2-206ENST00000638175 LINC00269Q8N2A0 174 aa4.12□□□□□ -1.75
SCARB2-206ENST00000638175 OR5A1Q8NGJ0 315 aa4.12□□□□□ -1.75
SCARB2-206ENST00000638175 YPEL4Q96NS1 127 aa4.12□□□□□ -1.75
SCARB2-206ENST00000638175 TIMM21Q9BVV7 248 aa4.12□□□□□ -1.75
SCARB2-206ENST00000638175 A0A087WTM6 91 aa4.11□□□□□ -1.75
SCARB2-206ENST00000638175 LINC01549A6NIU2 74 aa4.11□□□□□ -1.75
SCARB2-206ENST00000638175 IFITM10A6NMD0 228 aa4.11□□□□□ -1.75
SCARB2-206ENST00000638175 PRSS1P07477 247 aa4.11□□□□□ -1.75
SCARB2-206ENST00000638175 LINC01547P58512 204 aaPredicted RBP4.11□□□□□ -1.75
SCARB2-206ENST00000638175 FABP9Q0Z7S8 132 aa4.11□□□□□ -1.75
SCARB2-206ENST00000638175 KIAA1644Q3SXP7 199 aa4.11□□□□□ -1.75
SCARB2-206ENST00000638175 LBHQ53QV2 105 aaPredicted RBP4.11□□□□□ -1.75
SCARB2-206ENST00000638175 ENHOQ6UWT2 76 aa4.11□□□□□ -1.75
SCARB2-206ENST00000638175 CBLN2Q8IUK8 224 aa4.11□□□□□ -1.75
SCARB2-206ENST00000638175 DEFB104AQ8WTQ1 72 aa4.11□□□□□ -1.75
SCARB2-206ENST00000638175 ALKBH7Q9BT30 221 aaPredicted RBP4.11□□□□□ -1.75
SCARB2-206ENST00000638175 SPANXA1Q9NS26 97 aa4.11□□□□□ -1.75
SCARB2-206ENST00000638175 UBE2D4Q9Y2X8 147 aa4.11□□□□□ -1.75
SCARB2-206ENST00000638175 TRAPPC1Q9Y5R8 145 aa4.11□□□□□ -1.75
SCARB2-206ENST00000638175 BIRC6Q9NR09 4857 aa4.11□□□□□ -1.75
SCARB2-206ENST00000638175 LOC389332A0A1B0GUA5 103 aa4.1□□□□□ -1.75
SCARB2-206ENST00000638175 CCL25O15444 150 aa4.1□□□□□ -1.75
SCARB2-206ENST00000638175 IFI27P40305 119 aaPredicted RBP4.1□□□□□ -1.75
SCARB2-206ENST00000638175 CLPSL2Q6UWE3 100 aa4.1□□□□□ -1.75
SCARB2-206ENST00000638175 CDC42SE2Q9NRR3 84 aa4.1□□□□□ -1.75
SCARB2-206ENST00000638175 CYSLTR1Q9Y271 337 aa4.1□□□□□ -1.75
SCARB2-206ENST00000638175 PYGO1Q9Y3Y4 419 aa4.1□□□□□ -1.75
SCARB2-206ENST00000638175 LRCOL1A6NCL2 159 aa4.09□□□□□ -1.75
SCARB2-206ENST00000638175 LINC01546A6NGU7 62 aa4.09□□□□□ -1.75
SCARB2-206ENST00000638175 MRPS36P82909 103 aaKnown RBP4.09□□□□□ -1.75
SCARB2-206ENST00000638175 C14orf177Q52M58 125 aa4.09□□□□□ -1.75
SCARB2-206ENST00000638175 ZNF664Q8N3J9 261 aa4.09□□□□□ -1.75
SCARB2-206ENST00000638175 Q8N814 137 aa4.09□□□□□ -1.75
SCARB2-206ENST00000638175 DNAH5Q8TE73 4624 aa4.09□□□□□ -1.75
SCARB2-206ENST00000638175 DNAH11Q96DT5 4516 aa4.09□□□□□ -1.76
SCARB2-206ENST00000638175 IGLV10-54A0A075B6I4 117 aa4.08□□□□□ -1.76
SCARB2-206ENST00000638175 C1orf196B1AJZ1 125 aa4.08□□□□□ -1.76
SCARB2-206ENST00000638175 RAB5BP61020 215 aa4.08□□□□□ -1.76
SCARB2-206ENST00000638175 RPL39P62891 51 aaKnown RBP4.08□□□□□ -1.76
SCARB2-206ENST00000638175 SS18Q15532 418 aa4.08□□□□□ -1.76
SCARB2-206ENST00000638175 C2orf66Q6UXQ4 117 aa4.08□□□□□ -1.76
SCARB2-206ENST00000638175 Q6ZUT4 128 aa4.08□□□□□ -1.76
SCARB2-206ENST00000638175 FA2HQ7L5A8 372 aa4.08□□□□□ -1.76
SCARB2-206ENST00000638175 SPATA12Q7Z6I5 190 aa4.08□□□□□ -1.76
SCARB2-206ENST00000638175 C18orf32Q8TCD1 76 aa4.08□□□□□ -1.76
SCARB2-206ENST00000638175 TIMM17AQ99595 171 aa4.08□□□□□ -1.76
SCARB2-206ENST00000638175 A0A087WYN8 130 aa4.07□□□□□ -1.76
SCARB2-206ENST00000638175 IGKV3OR2-268A0A0C4DH90 116 aa4.07□□□□□ -1.76
SCARB2-206ENST00000638175 LINC00959A0A1B0GUT2 108 aa4.07□□□□□ -1.76
SCARB2-206ENST00000638175 C16orf90A8MZG2 172 aa4.07□□□□□ -1.76
SCARB2-206ENST00000638175 S100A1P23297 94 aa4.07□□□□□ -1.76
SCARB2-206ENST00000638175 KRTAP26-1Q6PEX3 210 aa4.07□□□□□ -1.76
SCARB2-206ENST00000638175 Q6ZN92 141 aa4.07□□□□□ -1.76
SCARB2-206ENST00000638175 BAALCQ8WXS3 180 aa4.07□□□□□ -1.76
SCARB2-206ENST00000638175 CHCHD10Q8WYQ3 142 aaPredicted RBP4.07□□□□□ -1.76
SCARB2-206ENST00000638175 TMEM141Q96I45 108 aa4.07□□□□□ -1.76
SCARB2-206ENST00000638175 C2orf88Q9BSF0 95 aa4.07□□□□□ -1.76
SCARB2-206ENST00000638175 IGLV4-3A0A075B6K6 122 aa4.06□□□□□ -1.76
SCARB2-206ENST00000638175 IGIPA6NJ69 53 aa4.06□□□□□ -1.76
SCARB2-206ENST00000638175 COLCA2A8K830 154 aa4.06□□□□□ -1.76
SCARB2-206ENST00000638175 CDK2AP2O75956 126 aa4.06□□□□□ -1.76
SCARB2-206ENST00000638175 LINC00614P0C842 121 aa4.06□□□□□ -1.76
SCARB2-206ENST00000638175 WFDC2Q14508 124 aa4.06□□□□□ -1.76
SCARB2-206ENST00000638175 CD164L2Q6UWJ8 174 aa4.06□□□□□ -1.76
SCARB2-206ENST00000638175 TEX43Q6ZNM6 134 aa4.06□□□□□ -1.76
SCARB2-206ENST00000638175 ERASQ7Z444 233 aa4.06□□□□□ -1.76
SCARB2-206ENST00000638175 TOMM6Q96B49 74 aa4.06□□□□□ -1.76
SCARB2-206ENST00000638175 KIAA1109Q2LD37 5005 aa4.05□□□□□ -1.76
SCARB2-206ENST00000638175 TRAV13-1A0A0B4J241 112 aa4.05□□□□□ -1.76
SCARB2-206ENST00000638175 LECT2O14960 151 aa4.05□□□□□ -1.76
SCARB2-206ENST00000638175 ATP6V1G1O75348 118 aa4.05□□□□□ -1.76
SCARB2-206ENST00000638175 HBDP02042 147 aa4.05□□□□□ -1.76
SCARB2-206ENST00000638175 TRGC2P03986 189 aa4.05□□□□□ -1.76
SCARB2-206ENST00000638175 XCL1P47992 114 aa4.05□□□□□ -1.76
SCARB2-206ENST00000638175 RNASE13Q5GAN3 156 aaKnown RBP4.05□□□□□ -1.76
SCARB2-206ENST00000638175 FAM104AQ969W3 186 aa4.05□□□□□ -1.76
SCARB2-206ENST00000638175 CHCHD1Q96BP2 118 aaKnown RBP4.05□□□□□ -1.76
SCARB2-206ENST00000638175 AMELXQ99217 191 aa4.05□□□□□ -1.76
SCARB2-206ENST00000638175 VCX2Q9H322 139 aa4.05□□□□□ -1.76
SCARB2-206ENST00000638175 DYNC1H1Q14204 4646 aaKnown RBP4.04□□□□□ -1.76
SCARB2-206ENST00000638175 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.04□□□□□ -1.76
SCARB2-206ENST00000638175 GVQW2A0A096LPI5 108 aaPredicted RBP4.04□□□□□ -1.76
SCARB2-206ENST00000638175 IGHV1-58A0A0C4DH39 117 aa4.04□□□□□ -1.76
SCARB2-206ENST00000638175 A4D1N5 150 aa4.04□□□□□ -1.76
SCARB2-206ENST00000638175 COX7A2LO14548 114 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms