RNA–Protein interactions for RNA: ENST00000638134.1

CLCN2-222, Transcript of chloride voltage-gated channel 2, human

TSL 5

Gene CLCN2, Length 2,118 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLCN2-222	ENST00000638134	NIPBL	Q6KC79	2804 aa	eCLIP	11.37	□□□□□ -0.59
CLCN2-222	ENST00000638134	IGHV4-38-2	P0DP08	117 aa		11.36	□□□□□ -0.59
CLCN2-222	ENST00000638134	OBSCN-AS1	Q96MR7	158 aa		11.36	□□□□□ -0.59
CLCN2-222	ENST00000638134	FAM218A	Q96MZ4	157 aa		11.36	□□□□□ -0.59
CLCN2-222	ENST00000638134	NF1	P21359	2839 aa		11.36	□□□□□ -0.59
CLCN2-222	ENST00000638134	IGKV3D-7	A0A0C4DH55	119 aa		11.36	□□□□□ -0.59
CLCN2-222	ENST00000638134		G3V318	75 aa		11.36	□□□□□ -0.59
CLCN2-222	ENST00000638134	PF4	P02776	101 aa		11.36	□□□□□ -0.59
CLCN2-222	ENST00000638134	BRD3OS	Q6XYD6	125 aa		11.36	□□□□□ -0.59
CLCN2-222	ENST00000638134	EPM2A	B3EWF7	344 aa		11.35	□□□□□ -0.59
CLCN2-222	ENST00000638134	PSMB8	P28062	276 aa		11.35	□□□□□ -0.59
CLCN2-222	ENST00000638134	HIST2H2BD	Q6DRA6	164 aa		11.35	□□□□□ -0.59
CLCN2-222	ENST00000638134		F8WDY8	70 aa		11.34	□□□□□ -0.59
CLCN2-222	ENST00000638134	RPL28	P46779	137 aa	Known RBP	11.34	□□□□□ -0.59
CLCN2-222	ENST00000638134	UBE2D4	Q9Y2X8	147 aa		11.34	□□□□□ -0.59
CLCN2-222	ENST00000638134	PFN2	P35080	140 aa		11.33	□□□□□ -0.6
CLCN2-222	ENST00000638134	FHL2	Q14192	279 aa		11.33	□□□□□ -0.6
CLCN2-222	ENST00000638134	UNQ9165/PRO28630	Q6UXU0	137 aa		11.33	□□□□□ -0.6
CLCN2-222	ENST00000638134	LINC00846	Q9NV44	126 aa		11.33	□□□□□ -0.6
CLCN2-222	ENST00000638134	IGLV5-39	A0A0G2JS06	123 aa		11.33	□□□□□ -0.6
CLCN2-222	ENST00000638134		A0A087WVE0	104 aa		11.32	□□□□□ -0.6
CLCN2-222	ENST00000638134	SOSTDC1	Q6X4U4	206 aa		11.32	□□□□□ -0.6
CLCN2-222	ENST00000638134		Q9H8V8	135 aa		11.32	□□□□□ -0.6
CLCN2-222	ENST00000638134	CDKN2A-AS1	Q9UH64	79 aa		11.32	□□□□□ -0.6
CLCN2-222	ENST00000638134	RNASE13	Q5GAN3	156 aa	Known RBP	11.32	□□□□□ -0.6
CLCN2-222	ENST00000638134	FN1	P02751	2386 aa	Known RBP	11.31	□□□□□ -0.6
CLCN2-222	ENST00000638134	TRAV13-2	A0A0B4J235	113 aa		11.31	□□□□□ -0.6
CLCN2-222	ENST00000638134	SAA4	P35542	130 aa		11.31	□□□□□ -0.6
CLCN2-222	ENST00000638134	SERP1	Q9Y6X1	66 aa		11.31	□□□□□ -0.6
CLCN2-222	ENST00000638134	LY6G6D	O95868	133 aa		11.3	□□□□□ -0.6
CLCN2-222	ENST00000638134	ATP5EP2	Q5VTU8	51 aa		11.3	□□□□□ -0.6
CLCN2-222	ENST00000638134		Q9HAA7	133 aa		11.3	□□□□□ -0.6
CLCN2-222	ENST00000638134	C14orf132	Q9NPU4	83 aa		11.3	□□□□□ -0.6
CLCN2-222	ENST00000638134	TRAV12-2	A0A075B6T6	113 aa		11.3	□□□□□ -0.6
CLCN2-222	ENST00000638134	IGHG2	P01859	326 aa		11.3	□□□□□ -0.6
CLCN2-222	ENST00000638134	S100A7L2	Q5SY68	101 aa		11.3	□□□□□ -0.6
CLCN2-222	ENST00000638134	CHCHD7	Q9BUK0	85 aa		11.3	□□□□□ -0.6
CLCN2-222	ENST00000638134	FAM236D	A0A1B0GTK5	79 aa		11.29	□□□□□ -0.6
CLCN2-222	ENST00000638134	RS1	O15537	224 aa		11.29	□□□□□ -0.6
CLCN2-222	ENST00000638134	FAM236C	P0DP71	79 aa		11.29	□□□□□ -0.6
CLCN2-222	ENST00000638134	IGHV1OR15-1	A0A075B7D0	117 aa		11.29	□□□□□ -0.6
CLCN2-222	ENST00000638134	C19orf54	Q5BKX5	351 aa		11.29	□□□□□ -0.6
CLCN2-222	ENST00000638134		J3QLI3	93 aa		11.28	□□□□□ -0.6
CLCN2-222	ENST00000638134	TMEM243	Q9BU79	118 aa		11.28	□□□□□ -0.6
CLCN2-222	ENST00000638134	RHPN1-AS1	Q9BWJ2	59 aa		11.27	□□□□□ -0.6
CLCN2-222	ENST00000638134	RBMY1B	A6NDE4	496 aa	Known RBP	11.27	□□□□□ -0.61
CLCN2-222	ENST00000638134	RBMY1E	A6NEQ0	496 aa	Known RBP	11.27	□□□□□ -0.61
CLCN2-222	ENST00000638134	RBMY1D	P0C7P1	496 aa	Known RBP	11.27	□□□□□ -0.61
CLCN2-222	ENST00000638134	RBMY1A1	P0DJD3	496 aa	Known RBP	11.27	□□□□□ -0.61
CLCN2-222	ENST00000638134	RBMY1C	P0DJD4	496 aa		11.27	□□□□□ -0.61
CLCN2-222	ENST00000638134	RBMY1F	Q15415	496 aa	Known RBP	11.27	□□□□□ -0.61
CLCN2-222	ENST00000638134		H0YGX0	51 aa		11.26	□□□□□ -0.61
CLCN2-222	ENST00000638134	GHRH	P01286	108 aa		11.26	□□□□□ -0.61
CLCN2-222	ENST00000638134	JMJD1C	Q15652	2540 aa		11.26	□□□□□ -0.61
CLCN2-222	ENST00000638134	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.26	□□□□□ -0.61
CLCN2-222	ENST00000638134	FSHB	P01225	129 aa		11.26	□□□□□ -0.61
CLCN2-222	ENST00000638134	TRBV12-3	P01733	135 aa		11.26	□□□□□ -0.61
CLCN2-222	ENST00000638134	CRP	P02741	224 aa		11.26	□□□□□ -0.61
CLCN2-222	ENST00000638134	LINC00336	Q6ZUF6	198 aa		11.26	□□□□□ -0.61
CLCN2-222	ENST00000638134	C5orf56	Q8N8D9	126 aa		11.26	□□□□□ -0.61
CLCN2-222	ENST00000638134	ZNF625	Q96I27	306 aa	Predicted RBP	11.25	□□□□□ -0.61
CLCN2-222	ENST00000638134	IGKV3-7	A0A075B6H7	116 aa		11.24	□□□□□ -0.61
CLCN2-222	ENST00000638134	FAM19A3	Q7Z5A8	133 aa		11.24	□□□□□ -0.61
CLCN2-222	ENST00000638134	BCE1	O60756	84 aa		11.24	□□□□□ -0.61
CLCN2-222	ENST00000638134	C9orf129	Q5T035	196 aa	Known RBP	11.24	□□□□□ -0.61
CLCN2-222	ENST00000638134	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.24	□□□□□ -0.61
CLCN2-222	ENST00000638134		A0A0U1RRA0	63 aa		11.23	□□□□□ -0.61
CLCN2-222	ENST00000638134	HOXD3	P31249	432 aa	Predicted RBP	11.23	□□□□□ -0.61
CLCN2-222	ENST00000638134	DEFB112	Q30KQ8	113 aa		11.23	□□□□□ -0.61
CLCN2-222	ENST00000638134	USMG5	Q96IX5	58 aa		11.23	□□□□□ -0.61
CLCN2-222	ENST00000638134	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.23	□□□□□ -0.61
CLCN2-222	ENST00000638134	TRBV10-3	A0A0K0K1G6	114 aa		11.23	□□□□□ -0.61
CLCN2-222	ENST00000638134	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.23	□□□□□ -0.61
CLCN2-222	ENST00000638134	INAFM1	C9JVW0	142 aa		11.23	□□□□□ -0.61
CLCN2-222	ENST00000638134	LINC00467	Q9BRT7	94 aa		11.23	□□□□□ -0.61
CLCN2-222	ENST00000638134	SMIM1	B2RUZ4	78 aa		11.22	□□□□□ -0.61
CLCN2-222	ENST00000638134	CCK	P06307	115 aa		11.22	□□□□□ -0.61
CLCN2-222	ENST00000638134	XCL1	P47992	114 aa		11.22	□□□□□ -0.61
CLCN2-222	ENST00000638134	C1orf43	Q9BWL3	253 aa		11.22	□□□□□ -0.61
CLCN2-222	ENST00000638134	XCL2	Q9UBD3	114 aa		11.22	□□□□□ -0.61
CLCN2-222	ENST00000638134		A0A087WYN8	130 aa		11.21	□□□□□ -0.61
CLCN2-222	ENST00000638134		H3BUA1	57 aa		11.21	□□□□□ -0.62
CLCN2-222	ENST00000638134	COX6A2	Q02221	97 aa		11.21	□□□□□ -0.62
CLCN2-222	ENST00000638134	PIK3CD-AS1	Q5SR53	167 aa		11.2	□□□□□ -0.62
CLCN2-222	ENST00000638134	LINC00242	Q5T6M2	205 aa		11.2	□□□□□ -0.62
CLCN2-222	ENST00000638134	LYPD5	Q6UWN5	251 aa		11.2	□□□□□ -0.62
CLCN2-222	ENST00000638134	SMIM26	A0A096LP01	95 aa		11.2	□□□□□ -0.62
CLCN2-222	ENST00000638134	C20orf197	Q8N268	126 aa		11.2	□□□□□ -0.62
CLCN2-222	ENST00000638134		K7EMT4	169 aa		11.19	□□□□□ -0.62
CLCN2-222	ENST00000638134	LY6E	Q16553	131 aa		11.19	□□□□□ -0.62
CLCN2-222	ENST00000638134	MOB4	Q9Y3A3	225 aa		11.19	□□□□□ -0.62
CLCN2-222	ENST00000638134	IGHV3OR16-12	A0A075B7B8	117 aa		11.18	□□□□□ -0.62
CLCN2-222	ENST00000638134		H7BZZ5	65 aa		11.18	□□□□□ -0.62
CLCN2-222	ENST00000638134	DGAT2L7P	Q6IED9	249 aa		11.18	□□□□□ -0.62
CLCN2-222	ENST00000638134	LINC00337	Q8N6G1	96 aa		11.18	□□□□□ -0.62
CLCN2-222	ENST00000638134		H3BUX3	64 aa		11.18	□□□□□ -0.62
CLCN2-222	ENST00000638134	IGHV4-59	P01825	116 aa		11.18	□□□□□ -0.62
CLCN2-222	ENST00000638134	TMEM86B	Q8N661	226 aa		11.18	□□□□□ -0.62
CLCN2-222	ENST00000638134	SMIM11B	Q8TCY0	68 aa		11.18	□□□□□ -0.62
CLCN2-222	ENST00000638134	HILS1	P60008	231 aa		11.17	□□□□□ -0.62

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