RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 PLEKHB2Q96CS7 222 aa10.45□□□□□ -0.74
CLN6-219ENST00000637329 CDKN2A-AS1Q9UH64 79 aa10.45□□□□□ -0.74
CLN6-219ENST00000637329 DNAH7Q8WXX0 4024 aa10.45□□□□□ -0.74
CLN6-219ENST00000637329 DNAH10OSP0CZ25 163 aa10.44□□□□□ -0.74
CLN6-219ENST00000637329 Q8N3U1 123 aa10.44□□□□□ -0.74
CLN6-219ENST00000637329 IGHV1-58A0A0C4DH39 117 aa10.43□□□□□ -0.74
CLN6-219ENST00000637329 IGKV3OR2-268A0A0C4DH90 116 aa10.43□□□□□ -0.74
CLN6-219ENST00000637329 IGLV5-39A0A0G2JS06 123 aa10.43□□□□□ -0.74
CLN6-219ENST00000637329 CRPP02741 224 aa10.43□□□□□ -0.74
CLN6-219ENST00000637329 HNRNPA3P51991 378 aaKnown RBP10.43□□□□□ -0.74
CLN6-219ENST00000637329 COX6A2Q02221 97 aa10.43□□□□□ -0.74
CLN6-219ENST00000637329 PCP2Q8IVA1 136 aa10.43□□□□□ -0.74
CLN6-219ENST00000637329 LINC00588Q9Y4M8 146 aa10.43□□□□□ -0.74
CLN6-219ENST00000637329 IGHV3OR16-9A0A0B4J2B5 98 aa10.42□□□□□ -0.74
CLN6-219ENST00000637329 SMIM1B2RUZ4 78 aa10.42□□□□□ -0.74
CLN6-219ENST00000637329 SIVA1O15304 175 aa10.42□□□□□ -0.74
CLN6-219ENST00000637329 CLPSL2Q6UWE3 100 aa10.42□□□□□ -0.74
CLN6-219ENST00000637329 LINC01561Q8N1V8 128 aa10.42□□□□□ -0.74
CLN6-219ENST00000637329 APLNQ9ULZ1 77 aa10.42□□□□□ -0.74
CLN6-219ENST00000637329 RYR2Q92736 4967 aa10.41□□□□□ -0.74
CLN6-219ENST00000637329 A0A087WZ39 114 aa10.41□□□□□ -0.74
CLN6-219ENST00000637329 TRAV8-4A0A0B4J246 113 aa10.41□□□□□ -0.74
CLN6-219ENST00000637329 J3QQQ9 107 aa10.41□□□□□ -0.74
CLN6-219ENST00000637329 IGHV3-30P01768 117 aa10.41□□□□□ -0.74
CLN6-219ENST00000637329 IGHV3-33P01772 117 aa10.41□□□□□ -0.74
CLN6-219ENST00000637329 IGHV3-30-3P0DP02 117 aa10.41□□□□□ -0.74
CLN6-219ENST00000637329 IGHV3-30-5P0DP03 117 aa10.41□□□□□ -0.74
CLN6-219ENST00000637329 LGALS3P17931 250 aaKnown RBP10.41□□□□□ -0.74
CLN6-219ENST00000637329 MIAQ16674 131 aa10.41□□□□□ -0.74
CLN6-219ENST00000637329 KLK12Q9UKR0 248 aa10.41□□□□□ -0.74
CLN6-219ENST00000637329 TENM2Q9NT68 2774 aa10.4□□□□□ -0.74
CLN6-219ENST00000637329 MYMXA0A1B0GTQ4 84 aa10.4□□□□□ -0.74
CLN6-219ENST00000637329 K7EP13 123 aa10.4□□□□□ -0.74
CLN6-219ENST00000637329 SPINK8P0C7L1 97 aa10.4□□□□□ -0.74
CLN6-219ENST00000637329 CASC10Q5T4H9 136 aa10.4□□□□□ -0.74
CLN6-219ENST00000637329 CD164L2Q6UWJ8 174 aa10.4□□□□□ -0.74
CLN6-219ENST00000637329 ZNF815PA8K554 130 aa10.39□□□□□ -0.75
CLN6-219ENST00000637329 TSPEAR-AS2P59090 65 aa10.39□□□□□ -0.75
CLN6-219ENST00000637329 CHCHD10Q8WYQ3 142 aaPredicted RBP10.39□□□□□ -0.75
CLN6-219ENST00000637329 HIGD1BQ9P298 99 aa10.39□□□□□ -0.75
CLN6-219ENST00000637329 TRAV8-3A0A0A6YYJ7 113 aa10.38□□□□□ -0.75
CLN6-219ENST00000637329 LCE6AA0A183 80 aa10.38□□□□□ -0.75
CLN6-219ENST00000637329 XCL1P47992 114 aa10.38□□□□□ -0.75
CLN6-219ENST00000637329 ZFAND6Q6FIF0 208 aa10.38□□□□□ -0.75
CLN6-219ENST00000637329 ENHOQ6UWT2 76 aa10.38□□□□□ -0.75
CLN6-219ENST00000637329 C2orf91Q6ZV80 131 aa10.38□□□□□ -0.75
CLN6-219ENST00000637329 C10orf126Q8N4M7 172 aa10.38□□□□□ -0.75
CLN6-219ENST00000637329 MUC7Q8TAX7 377 aa10.38□□□□□ -0.75
CLN6-219ENST00000637329 IGHV3-64A0A075B6Q5 118 aa10.37□□□□□ -0.75
CLN6-219ENST00000637329 LINC00587B1AMM8 73 aa10.37□□□□□ -0.75
CLN6-219ENST00000637329 UBE2WQ96B02 151 aa10.37□□□□□ -0.75
CLN6-219ENST00000637329 TTTY13Q9BZ97 58 aa10.37□□□□□ -0.75
CLN6-219ENST00000637329 TP73-AS1Q9UF72 201 aa10.37□□□□□ -0.75
CLN6-219ENST00000637329 COX7A2LO14548 114 aa10.36□□□□□ -0.75
CLN6-219ENST00000637329 SACSQ9NZJ4 4579 aa10.36□□□□□ -0.75
CLN6-219ENST00000637329 CSMD3Q7Z407 3707 aa10.35□□□□□ -0.75
CLN6-219ENST00000637329 FOXI1Q12951 378 aa10.35□□□□□ -0.75
CLN6-219ENST00000637329 SFTA2Q6UW10 78 aa10.35□□□□□ -0.75
CLN6-219ENST00000637329 UBE2DNLQ8IWF7 75 aa10.35□□□□□ -0.75
CLN6-219ENST00000637329 MAPKAPK5-AS1Q8N8E1 139 aa10.35□□□□□ -0.75
CLN6-219ENST00000637329 IGLV10-54A0A075B6I4 117 aa10.34□□□□□ -0.75
CLN6-219ENST00000637329 NDUFA1O15239 70 aa10.34□□□□□ -0.75
CLN6-219ENST00000637329 NDUFA12Q9UI09 145 aa10.34□□□□□ -0.75
CLN6-219ENST00000637329 IBA57-AS1B1ANH7 110 aa10.33□□□□□ -0.76
CLN6-219ENST00000637329 CTAG1AP78358 180 aa10.33□□□□□ -0.76
CLN6-219ENST00000637329 SCGB1D4Q6XE38 83 aa10.33□□□□□ -0.76
CLN6-219ENST00000637329 C5orf38Q86SI9 138 aa10.33□□□□□ -0.76
CLN6-219ENST00000637329 GAGE12HA6NDE8 117 aa10.32□□□□□ -0.76
CLN6-219ENST00000637329 APOMO95445 188 aa10.32□□□□□ -0.76
CLN6-219ENST00000637329 HSD52Q0P140 79 aa10.32□□□□□ -0.76
CLN6-219ENST00000637329 Q8IZM0 81 aa10.32□□□□□ -0.76
CLN6-219ENST00000637329 COX7B2Q8TF08 81 aa10.32□□□□□ -0.76
CLN6-219ENST00000637329 C1orf43Q9BWL3 253 aa10.32□□□□□ -0.76
CLN6-219ENST00000637329 Q9H8V8 135 aa10.32□□□□□ -0.76
CLN6-219ENST00000637329 MALP21145 153 aa10.31□□□□□ -0.76
CLN6-219ENST00000637329 HERV-K104P63124 156 aa10.31□□□□□ -0.76
CLN6-219ENST00000637329 TAL2Q16559 108 aa10.31□□□□□ -0.76
CLN6-219ENST00000637329 RMI2Q96E14 147 aa10.31□□□□□ -0.76
CLN6-219ENST00000637329 M0R143 59 aa10.3□□□□□ -0.76
CLN6-219ENST00000637329 ZNF625Q96I27 306 aaPredicted RBP10.3□□□□□ -0.76
CLN6-219ENST00000637329 SPANXB1Q9NS25 103 aaPredicted RBP10.3□□□□□ -0.76
CLN6-219ENST00000637329 A0A0J9YXY3 114 aa10.29□□□□□ -0.76
CLN6-219ENST00000637329 TMEM238C9JI98 176 aa10.29□□□□□ -0.76
CLN6-219ENST00000637329 TIMM17BO60830 172 aa10.29□□□□□ -0.76
CLN6-219ENST00000637329 CXCL5P42830 114 aa10.29□□□□□ -0.76
CLN6-219ENST00000637329 TTC32Q5I0X7 151 aa10.29□□□□□ -0.76
CLN6-219ENST00000637329 KRTAP26-1Q6PEX3 210 aa10.29□□□□□ -0.76
CLN6-219ENST00000637329 STARD9Q9P2P6 4700 aa10.29□□□□□ -0.76
CLN6-219ENST00000637329 PRSS2P07478 247 aa10.28□□□□□ -0.76
CLN6-219ENST00000637329 ORAOV1Q8WV07 137 aa10.28□□□□□ -0.76
CLN6-219ENST00000637329 DNAH1Q9P2D7 4330 aa10.28□□□□□ -0.76
CLN6-219ENST00000637329 TOMM7Q9P0U1 55 aa10.27□□□□□ -0.77
CLN6-219ENST00000637329 COX11Q9Y6N1 276 aa10.27□□□□□ -0.77
CLN6-219ENST00000637329 LYSTQ99698 3801 aa10.26□□□□□ -0.77
CLN6-219ENST00000637329 IGKV2D-24A0A075B6R9 120 aa10.26□□□□□ -0.77
CLN6-219ENST00000637329 CFAP161Q6P656 301 aa10.26□□□□□ -0.77
CLN6-219ENST00000637329 HIST1H4GQ99525 98 aa10.26□□□□□ -0.77
CLN6-219ENST00000637329 PLECQ15149 4684 aaKnown RBP10.26□□□□□ -0.77
CLN6-219ENST00000637329 LBHQ53QV2 105 aaPredicted RBP10.25□□□□□ -0.77
CLN6-219ENST00000637329 C6orf226Q5I0X4 101 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms