RNA–Protein interactions for RNA: ENST00000637052.1

SYNGAP1-219, Transcript of synaptic Ras GTPase activating protein 1, human

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNGAP1-219	ENST00000637052	CDIP1	Q9H305	208 aa		4.19	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	SMDT1	Q9H4I9	107 aa		4.19	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.18	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	KIAA0087	Q14695	138 aa		4.18	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	TMEM241	Q24JQ0	296 aa		4.18	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	AMN1	Q8IY45	258 aa		4.18	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	CTDSP1	Q9GZU7	261 aa		4.18	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	BIN3	Q9NQY0	253 aa		4.18	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	CSDC2	Q9Y534	153 aa	Known RBP	4.18	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	IGLV7-46	A0A075B6I9	117 aa		4.17	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	VCY	O14598	125 aa		4.17	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	GATC	O43716	136 aa	Known RBP	4.17	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	FCER1G	P30273	86 aa		4.17	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	RPL39	P62891	51 aa	Known RBP	4.17	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	C2orf82	Q6UX34	121 aa		4.17	□□□□□ -1.74
SYNGAP1-219	ENST00000637052		F8WDY8	70 aa		4.16	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	PDE6D	O43924	150 aa		4.16	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	CRYGA	P11844	174 aa		4.16	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	TPRXL	Q17RH7	258 aa		4.16	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	LINC00242	Q5T6M2	205 aa		4.16	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	LINC00469	Q8N7U9	141 aa		4.16	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	NRAC	Q8N912	160 aa		4.16	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	C22orf24	Q9Y442	160 aa		4.16	□□□□□ -1.74
SYNGAP1-219	ENST00000637052	ZNF345	Q14585	488 aa		4.15	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	FAM210A	Q96ND0	272 aa		4.15	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	TIMM21	Q9BVV7	248 aa		4.15	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	TMEM191A	Q9H0A3	160 aa		4.15	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	KANTR	A0A1W2PQU2	76 aa		4.14	□□□□□ -1.75
SYNGAP1-219	ENST00000637052		A8MWL6	223 aa		4.14	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	NDUFC2-KCTD14	E9PQ53	114 aa		4.14	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	NUPR1	O60356	82 aa		4.14	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	LINC01547	P58512	204 aa	Predicted RBP	4.14	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	SUMO2	P61956	95 aa	Known RBP	4.14	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	LINC00173	Q6ZV60	143 aa		4.14	□□□□□ -1.75
SYNGAP1-219	ENST00000637052		A0A1B0GUT8	65 aa		4.13	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	HMSD	A8MTL9	139 aa		4.13	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	SRSF3	P84103	164 aa	Known RBP	4.13	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	FAM231D	Q6ZW35	169 aa		4.13	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	LINC00304	Q8N9R0	145 aa		4.13	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	KIR2DL4	Q99706	377 aa		4.13	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	PPDPF	Q9H3Y8	114 aa		4.13	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	XAGE1A	Q9HD64	81 aa		4.13	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	TRBV30	A0A0K0K1B3	111 aa		4.12	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	RPL37AP8	A6NKH3	93 aa		4.12	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	IFITM10	A6NMD0	228 aa		4.12	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	ZNF727	A8MUV8	499 aa		4.12	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	HIGD1C	A8MV81	97 aa		4.12	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	BCE1	O60756	84 aa		4.12	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	RPL28	P46779	137 aa	Known RBP	4.12	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	SMAGP	Q0VAQ4	97 aa		4.12	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	MRPL51	Q4U2R6	128 aa	Known RBP	4.12	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	TEX46	H3BTG2	121 aa		4.11	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	TCAP	O15273	167 aa		4.11	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	HBB	P68871	147 aa		4.11	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	MRPS36	P82909	103 aa	Known RBP	4.11	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	LBH	Q53QV2	105 aa	Predicted RBP	4.11	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	LCE2C	Q5TA81	110 aa		4.11	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	ZC2HC1B	Q5TFG8	222 aa		4.11	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	TMEM18	Q96B42	140 aa		4.11	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	BORCS7	Q96B45	105 aa		4.11	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	PACRG	Q96M98	296 aa	Predicted RBP	4.11	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	LINC00167	Q96N53	147 aa		4.11	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.1	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	GAGE10	A6NGK3	116 aa		4.1	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	ASB16-AS1	Q495Z4	193 aa		4.1	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	CT83	Q5H943	113 aa		4.1	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	MRPL55	Q7Z7F7	128 aa	Known RBP	4.1	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	KRTAP13-1	Q8IUC0	172 aa		4.1	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	BATF3	Q9NR55	127 aa		4.1	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	IGLV4-3	A0A075B6K6	122 aa		4.09	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	PPP1R2P9	O14990	202 aa		4.09	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	CEBPG	P53567	150 aa		4.09	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	FAM104B	Q5XKR9	115 aa		4.09	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	C3orf22	Q8N5N4	141 aa		4.09	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	SPANXA1	Q9NS26	97 aa		4.09	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	TOMM7	Q9P0U1	55 aa		4.09	□□□□□ -1.75
SYNGAP1-219	ENST00000637052	TRBV24-1	A0A075B6N3	115 aa		4.08	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	IGKV2D-26	A0A0A0MRZ7	120 aa		4.08	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	SCO1	O75880	301 aa		4.08	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	TNFRSF6B	O95407	300 aa		4.08	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	PPP1R17	O96001	155 aa		4.08	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	RPL32	P62910	135 aa	Known RBP	4.08	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	RIG	Q13278	110 aa		4.08	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	KRTAP13-3	Q3SY46	172 aa		4.08	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	FAM229B	Q4G0N7	80 aa		4.08	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	LINC01551	Q86U37	167 aa		4.08	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	C20orf78	Q9BR46	151 aa		4.08	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	SMIM2	Q9BVW6	85 aa		4.08	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	TP73-AS1	Q9UF72	201 aa		4.08	□□□□□ -1.76
SYNGAP1-219	ENST00000637052		V9GYV3	84 aa		4.08	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	PRSS47	A8MTI9	375 aa		4.07	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	NPY	P01303	97 aa		4.07	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	CKS2	P33552	79 aa		4.07	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	UBE2A	P49459	152 aa		4.07	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	OSTC	Q9NRP0	149 aa		4.07	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	LINC00862	A6NCI5	91 aa		4.06	□□□□□ -1.76
SYNGAP1-219	ENST00000637052		D6R8Y8	96 aa		4.06	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	TMEM250	H0YL14	139 aa		4.06	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	PRSS2	P07478	247 aa		4.06	□□□□□ -1.76
SYNGAP1-219	ENST00000637052	TAGLN2	P37802	199 aa	Known RBP	4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms