RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 CHCHD7Q9BUK0 85 aa8.6□□□□□ -1.03
CTSD-208ENST00000636843 CHAC1Q9BUX1 264 aa8.6□□□□□ -1.03
CTSD-208ENST00000636843 VCX2Q9H322 139 aa8.6□□□□□ -1.03
CTSD-208ENST00000636843 PGPEP1Q9NXJ5 209 aa8.6□□□□□ -1.03
CTSD-208ENST00000636843 ICOSQ9Y6W8 199 aa8.6□□□□□ -1.03
CTSD-208ENST00000636843 MYMXA0A1B0GTQ4 84 aa8.59□□□□□ -1.03
CTSD-208ENST00000636843 TAL2Q16559 108 aa8.59□□□□□ -1.03
CTSD-208ENST00000636843 PRADC1Q9BSG0 188 aa8.59□□□□□ -1.03
CTSD-208ENST00000636843 TTTY13Q9BZ97 58 aa8.59□□□□□ -1.03
CTSD-208ENST00000636843 DAZ4Q86SG3 579 aaKnown RBP8.59□□□□□ -1.03
CTSD-208ENST00000636843 AMELXQ99217 191 aa8.59□□□□□ -1.03
CTSD-208ENST00000636843 DAZ3Q9NR90 486 aaKnown RBP8.59□□□□□ -1.03
CTSD-208ENST00000636843 Q9UF83 564 aa8.59□□□□□ -1.03
CTSD-208ENST00000636843 PRO0255Q9UI72 69 aa8.59□□□□□ -1.03
CTSD-208ENST00000636843 TAX1BP3O14907 124 aa8.58□□□□□ -1.04
CTSD-208ENST00000636843 TIMM21Q9BVV7 248 aa8.58□□□□□ -1.04
CTSD-208ENST00000636843 UBE2D4Q9Y2X8 147 aa8.58□□□□□ -1.04
CTSD-208ENST00000636843 TRBV6-4A0A1B0GX49 114 aa8.57□□□□□ -1.04
CTSD-208ENST00000636843 SMAGPQ0VAQ4 97 aa8.57□□□□□ -1.04
CTSD-208ENST00000636843 MRPL23Q16540 153 aaKnown RBP8.57□□□□□ -1.04
CTSD-208ENST00000636843 TMEM170BQ5T4T1 132 aa8.57□□□□□ -1.04
CTSD-208ENST00000636843 OPRPNQ99935 248 aaPredicted RBP8.57□□□□□ -1.04
CTSD-208ENST00000636843 IGHV3-38A0A0C4DH36 116 aa8.56□□□□□ -1.04
CTSD-208ENST00000636843 EPM2AB3EWF7 344 aa8.56□□□□□ -1.04
CTSD-208ENST00000636843 UBE2D3P61077 147 aa8.56□□□□□ -1.04
CTSD-208ENST00000636843 UBE2D2P62837 147 aa8.56□□□□□ -1.04
CTSD-208ENST00000636843 MRPS36P82909 103 aaKnown RBP8.56□□□□□ -1.04
CTSD-208ENST00000636843 SLC25A29Q8N8R3 303 aa8.56□□□□□ -1.04
CTSD-208ENST00000636843 H3BRM9 83 aa8.55□□□□□ -1.04
CTSD-208ENST00000636843 FHL2Q14192 279 aa8.55□□□□□ -1.04
CTSD-208ENST00000636843 LYPD5Q6UWN5 251 aa8.55□□□□□ -1.04
CTSD-208ENST00000636843 CEND1Q8N111 149 aa8.55□□□□□ -1.04
CTSD-208ENST00000636843 TM2D2Q9BX73 214 aa8.55□□□□□ -1.04
CTSD-208ENST00000636843 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.54□□□□□ -1.04
CTSD-208ENST00000636843 TMEM223A0PJW6 202 aa8.54□□□□□ -1.04
CTSD-208ENST00000636843 IGKV2-29A2NJV5 120 aaPredicted RBP8.54□□□□□ -1.04
CTSD-208ENST00000636843 ZNF815PA8K554 130 aa8.54□□□□□ -1.04
CTSD-208ENST00000636843 K7EP13 123 aa8.54□□□□□ -1.04
CTSD-208ENST00000636843 GCSHP23434 173 aa8.54□□□□□ -1.04
CTSD-208ENST00000636843 FAM104AQ969W3 186 aa8.54□□□□□ -1.04
CTSD-208ENST00000636843 GTSF1LQ9H1H1 148 aa8.54□□□□□ -1.04
CTSD-208ENST00000636843 TRGV4A0A0C4DH28 118 aa8.54□□□□□ -1.04
CTSD-208ENST00000636843 A0A0J9YXV3 536 aa8.54□□□□□ -1.04
CTSD-208ENST00000636843 LEPROTO15243 131 aa8.54□□□□□ -1.04
CTSD-208ENST00000636843 ZNF22P17026 224 aaPredicted RBP8.54□□□□□ -1.04
CTSD-208ENST00000636843 CSDC2Q9Y534 153 aaKnown RBP8.54□□□□□ -1.04
CTSD-208ENST00000636843 TINCRA0A1B0GVN0 87 aa8.53□□□□□ -1.04
CTSD-208ENST00000636843 GAGE12JA6NER3 117 aa8.53□□□□□ -1.04
CTSD-208ENST00000636843 GAGE4Q13068 117 aa8.53□□□□□ -1.04
CTSD-208ENST00000636843 GAGE5Q13069 117 aa8.53□□□□□ -1.04
CTSD-208ENST00000636843 GAGE13Q4V321 117 aa8.53□□□□□ -1.04
CTSD-208ENST00000636843 DGAT2L7PQ6IED9 249 aa8.53□□□□□ -1.04
CTSD-208ENST00000636843 Q6ZVH6 145 aa8.53□□□□□ -1.04
CTSD-208ENST00000636843 PLEKHB2Q96CS7 222 aa8.53□□□□□ -1.04
CTSD-208ENST00000636843 HIST1H4GQ99525 98 aa8.53□□□□□ -1.04
CTSD-208ENST00000636843 A0A087WTM6 91 aa8.52□□□□□ -1.05
CTSD-208ENST00000636843 J3QQQ9 107 aa8.52□□□□□ -1.05
CTSD-208ENST00000636843 SMIM13P0DJ93 91 aa8.52□□□□□ -1.05
CTSD-208ENST00000636843 LGALS3P17931 250 aaKnown RBP8.52□□□□□ -1.05
CTSD-208ENST00000636843 PTTG1IPP53801 180 aa8.52□□□□□ -1.05
CTSD-208ENST00000636843 XGP55808 180 aa8.52□□□□□ -1.05
CTSD-208ENST00000636843 SCGB1D4Q6XE38 83 aa8.52□□□□□ -1.05
CTSD-208ENST00000636843 C9orf118A6NHY6 69 aa8.51□□□□□ -1.05
CTSD-208ENST00000636843 H7C423 109 aa8.51□□□□□ -1.05
CTSD-208ENST00000636843 FUSP35637 526 aaKnown RBP eCLIP8.51□□□□□ -1.05
CTSD-208ENST00000636843 FXYD2P54710 66 aa8.51□□□□□ -1.05
CTSD-208ENST00000636843 UBE2V1Q13404 147 aa8.51□□□□□ -1.05
CTSD-208ENST00000636843 VAMP3Q15836 100 aa8.51□□□□□ -1.05
CTSD-208ENST00000636843 Q6ZUT4 128 aa8.51□□□□□ -1.05
CTSD-208ENST00000636843 VPS13BQ7Z7G8 4022 aa8.51□□□□□ -1.05
CTSD-208ENST00000636843 INAFM2P0DMQ5 153 aa8.5□□□□□ -1.05
CTSD-208ENST00000636843 NTM-AS1Q6ZSK4 140 aa8.5□□□□□ -1.05
CTSD-208ENST00000636843 DNAH10OSP0CZ25 163 aa8.49□□□□□ -1.05
CTSD-208ENST00000636843 GYPEP15421 78 aa8.49□□□□□ -1.05
CTSD-208ENST00000636843 UBE2D1P51668 147 aa8.49□□□□□ -1.05
CTSD-208ENST00000636843 TIRAPP58753 221 aa8.49□□□□□ -1.05
CTSD-208ENST00000636843 TMEM243Q9BU79 118 aa8.49□□□□□ -1.05
CTSD-208ENST00000636843 SPANXB1Q9NS25 103 aaPredicted RBP8.49□□□□□ -1.05
CTSD-208ENST00000636843 HERC1Q15751 4861 aa8.49□□□□□ -1.05
CTSD-208ENST00000636843 UBE2L6O14933 153 aa8.49□□□□□ -1.05
CTSD-208ENST00000636843 LINC00694P0DN24 101 aa8.49□□□□□ -1.05
CTSD-208ENST00000636843 TSPEAR-AS2P59090 65 aa8.49□□□□□ -1.05
CTSD-208ENST00000636843 KRTAP10-1P60331 282 aa8.49□□□□□ -1.05
CTSD-208ENST00000636843 RNASE13Q5GAN3 156 aaKnown RBP8.49□□□□□ -1.05
CTSD-208ENST00000636843 FAM19A3Q7Z5A8 133 aa8.49□□□□□ -1.05
CTSD-208ENST00000636843 WFDC10BQ8IUB3 73 aa8.49□□□□□ -1.05
CTSD-208ENST00000636843 C10orf126Q8N4M7 172 aa8.49□□□□□ -1.05
CTSD-208ENST00000636843 GEMIN7Q9H840 131 aaKnown RBP8.49□□□□□ -1.05
CTSD-208ENST00000636843 FAT1Q14517 4588 aa8.48□□□□□ -1.05
CTSD-208ENST00000636843 IGHV1-58A0A0C4DH39 117 aa8.48□□□□□ -1.05
CTSD-208ENST00000636843 TMEM238LA0A1B0GVL6 79 aa8.48□□□□□ -1.05
CTSD-208ENST00000636843 A6NJY4 79 aa8.48□□□□□ -1.05
CTSD-208ENST00000636843 SRSF9Q13242 221 aaKnown RBP eCLIP8.48□□□□□ -1.05
CTSD-208ENST00000636843 Q5VSD8 79 aa8.48□□□□□ -1.05
CTSD-208ENST00000636843 SH2D6Q7Z4S9 175 aa8.48□□□□□ -1.05
CTSD-208ENST00000636843 OR5A1Q8NGJ0 315 aa8.48□□□□□ -1.05
CTSD-208ENST00000636843 TMEM101Q96IK0 257 aa8.48□□□□□ -1.05
CTSD-208ENST00000636843 DMBT1Q9UGM3 2413 aaPredicted RBP8.48□□□□□ -1.05
CTSD-208ENST00000636843 IGLV5-45A0A087WSX0 123 aa8.47□□□□□ -1.05
CTSD-208ENST00000636843 LOC100131303A0A0U1RQF7 123 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 187.5 ms