RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 COA6Q5JTJ3 125 aaKnown RBP4.55□□□□□ -1.68
SCN1A-212ENST00000636194 CD164L2Q6UWJ8 174 aa4.55□□□□□ -1.68
SCN1A-212ENST00000636194 POM121L12Q8N7R1 296 aa4.55□□□□□ -1.68
SCN1A-212ENST00000636194 IGF2RP11717 2491 aa4.55□□□□□ -1.68
SCN1A-212ENST00000636194 C11orf53Q8IXP5 236 aa4.55□□□□□ -1.68
SCN1A-212ENST00000636194 IGLV11-55A0A075B6I3 123 aa4.55□□□□□ -1.68
SCN1A-212ENST00000636194 H0Y9P7 68 aa4.54□□□□□ -1.68
SCN1A-212ENST00000636194 ZNF73O43830 326 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-212ENST00000636194 EDN2P20800 178 aa4.54□□□□□ -1.68
SCN1A-212ENST00000636194 LINC01547P58512 204 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-212ENST00000636194 TRBV6-8A0A0A6YYG3 113 aa4.54□□□□□ -1.68
SCN1A-212ENST00000636194 SOSTDC1Q6X4U4 206 aa4.54□□□□□ -1.68
SCN1A-212ENST00000636194 MAP6D1Q9H9H5 199 aa4.54□□□□□ -1.68
SCN1A-212ENST00000636194 IGLV1-44P01699 117 aa4.54□□□□□ -1.68
SCN1A-212ENST00000636194 C20orf203Q8NBC4 194 aa4.54□□□□□ -1.68
SCN1A-212ENST00000636194 COL27A1Q8IZC6 1860 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-212ENST00000636194 TRAV7A0A075B6U4 112 aa4.54□□□□□ -1.68
SCN1A-212ENST00000636194 TRBV7-7A0A0K0K1E9 115 aa4.54□□□□□ -1.68
SCN1A-212ENST00000636194 F8WDY8 70 aa4.54□□□□□ -1.68
SCN1A-212ENST00000636194 TPSG1Q9NRR2 321 aa4.54□□□□□ -1.68
SCN1A-212ENST00000636194 ZNRD1Q9P1U0 126 aa4.54□□□□□ -1.68
SCN1A-212ENST00000636194 TRBV10-3A0A0K0K1G6 114 aa4.54□□□□□ -1.68
SCN1A-212ENST00000636194 RPL37AP8A6NKH3 93 aa4.54□□□□□ -1.68
SCN1A-212ENST00000636194 A0A0J9YX75 114 aa4.53□□□□□ -1.68
SCN1A-212ENST00000636194 C15orf65H3BRN8 121 aa4.53□□□□□ -1.68
SCN1A-212ENST00000636194 ADCYAP1P18509 176 aa4.53□□□□□ -1.68
SCN1A-212ENST00000636194 LINC00205P59089 165 aa4.53□□□□□ -1.68
SCN1A-212ENST00000636194 ZNF702PQ9H963 129 aa4.53□□□□□ -1.68
SCN1A-212ENST00000636194 PCOTHQ58A44 107 aa4.53□□□□□ -1.68
SCN1A-212ENST00000636194 KPRPQ5T749 579 aaPredicted RBP4.53□□□□□ -1.68
SCN1A-212ENST00000636194 LELP1Q5T871 98 aa4.53□□□□□ -1.68
SCN1A-212ENST00000636194 FXYD2P54710 66 aa4.53□□□□□ -1.68
SCN1A-212ENST00000636194 DMBT1Q9UGM3 2413 aaPredicted RBP4.53□□□□□ -1.68
SCN1A-212ENST00000636194 B3GALT5-AS1P59052 145 aa4.53□□□□□ -1.68
SCN1A-212ENST00000636194 MSMPQ1L6U9 139 aa4.53□□□□□ -1.68
SCN1A-212ENST00000636194 TP53AIP1Q9HCN2 124 aa4.53□□□□□ -1.68
SCN1A-212ENST00000636194 STAB1Q9NY15 2570 aa4.53□□□□□ -1.68
SCN1A-212ENST00000636194 HECTD1Q9ULT8 2610 aa4.53□□□□□ -1.68
SCN1A-212ENST00000636194 C2orf48Q96LS8 159 aa4.53□□□□□ -1.68
SCN1A-212ENST00000636194 A0A087WV48 116 aa4.52□□□□□ -1.69
SCN1A-212ENST00000636194 TRBV6-4A0A1B0GX49 114 aa4.52□□□□□ -1.69
SCN1A-212ENST00000636194 C6orf99Q4VX62 202 aa4.52□□□□□ -1.69
SCN1A-212ENST00000636194 LRRC75A-AS1Q8N1F1 130 aa4.52□□□□□ -1.69
SCN1A-212ENST00000636194 RNASE8Q8TDE3 154 aaKnown RBP4.52□□□□□ -1.69
SCN1A-212ENST00000636194 COX7CP15954 63 aa4.52□□□□□ -1.69
SCN1A-212ENST00000636194 COX6B2Q6YFQ2 88 aa4.52□□□□□ -1.69
SCN1A-212ENST00000636194 ATP11AUNQ6ZP68 121 aa4.52□□□□□ -1.69
SCN1A-212ENST00000636194 C6orf223Q8N319 242 aa4.51□□□□□ -1.69
SCN1A-212ENST00000636194 LINC00308Q8TCZ7 52 aa4.51□□□□□ -1.69
SCN1A-212ENST00000636194 K7EIM0 57 aa4.51□□□□□ -1.69
SCN1A-212ENST00000636194 IGLV2-14P01704 120 aa4.51□□□□□ -1.69
SCN1A-212ENST00000636194 CYSRT1A8MQ03 144 aa4.51□□□□□ -1.69
SCN1A-212ENST00000636194 FRMD6-AS1P0C7T7 363 aa4.51□□□□□ -1.69
SCN1A-212ENST00000636194 LINC00575Q6W349 94 aa4.51□□□□□ -1.69
SCN1A-212ENST00000636194 LINC00467Q9BRT7 94 aa4.51□□□□□ -1.69
SCN1A-212ENST00000636194 PRRC2CQ9Y520 2896 aaKnown RBP4.51□□□□□ -1.69
SCN1A-212ENST00000636194 I3L2K1 104 aa4.51□□□□□ -1.69
SCN1A-212ENST00000636194 C1orf137Q5JT78 98 aa4.5□□□□□ -1.69
SCN1A-212ENST00000636194 E7EUB6 86 aa4.5□□□□□ -1.69
SCN1A-212ENST00000636194 ODF3BA8MYP8 253 aa4.49□□□□□ -1.69
SCN1A-212ENST00000636194 A8MZ25 164 aa4.49□□□□□ -1.69
SCN1A-212ENST00000636194 IGLV2-8P01709 118 aa4.49□□□□□ -1.69
SCN1A-212ENST00000636194 FAM229AH3BQW9 127 aa4.49□□□□□ -1.69
SCN1A-212ENST00000636194 IGLV2-11P01706 119 aa4.49□□□□□ -1.69
SCN1A-212ENST00000636194 MSRB1Q9NZV6 116 aa4.49□□□□□ -1.69
SCN1A-212ENST00000636194 Q6ZTI0 123 aa4.49□□□□□ -1.69
SCN1A-212ENST00000636194 IGLV8-61A0A075B6I0 122 aa4.48□□□□□ -1.69
SCN1A-212ENST00000636194 LINC00694P0DN24 101 aa4.48□□□□□ -1.69
SCN1A-212ENST00000636194 FLVCR1-AS1Q8TAF5 88 aa4.48□□□□□ -1.69
SCN1A-212ENST00000636194 C8orf17Q9NRJ1 99 aa4.48□□□□□ -1.69
SCN1A-212ENST00000636194 LINC01556Q5JQF7 62 aa4.48□□□□□ -1.69
SCN1A-212ENST00000636194 C10orf91Q5T1B1 145 aa4.48□□□□□ -1.69
SCN1A-212ENST00000636194 Q9BRP9 147 aa4.48□□□□□ -1.69
SCN1A-212ENST00000636194 C1orf134Q5TEV5 83 aa4.48□□□□□ -1.69
SCN1A-212ENST00000636194 TRIAP1O43715 76 aa4.47□□□□□ -1.69
SCN1A-212ENST00000636194 Q6ZR03 302 aa4.47□□□□□ -1.69
SCN1A-212ENST00000636194 Q6ZTC4 211 aa4.47□□□□□ -1.69
SCN1A-212ENST00000636194 CHCHD7Q9BUK0 85 aa4.47□□□□□ -1.69
SCN1A-212ENST00000636194 APLNQ9ULZ1 77 aa4.47□□□□□ -1.69
SCN1A-212ENST00000636194 C17orf82Q86X59 251 aaPredicted RBP4.47□□□□□ -1.69
SCN1A-212ENST00000636194 Q8IZM0 81 aa4.47□□□□□ -1.69
SCN1A-212ENST00000636194 NHLRC4P0CG21 123 aaPredicted RBP4.47□□□□□ -1.69
SCN1A-212ENST00000636194 BAHCC1Q9P281 2608 aa4.47□□□□□ -1.69
SCN1A-212ENST00000636194 C6orf48Q9UBA6 75 aa4.47□□□□□ -1.69
SCN1A-212ENST00000636194 LTBP2Q14767 1821 aa4.47□□□□□ -1.69
SCN1A-212ENST00000636194 HCG22E2RYF7 251 aa4.47□□□□□ -1.69
SCN1A-212ENST00000636194 MAST4O15021 2626 aa4.47□□□□□ -1.69
SCN1A-212ENST00000636194 LINC00483Q53H64 154 aa4.46□□□□□ -1.69
SCN1A-212ENST00000636194 C1orf229Q6ZS94 237 aaPredicted RBP4.46□□□□□ -1.69
SCN1A-212ENST00000636194 DEFB114Q30KQ6 69 aa4.46□□□□□ -1.7
SCN1A-212ENST00000636194 CDKN2A-AS1Q9UH64 79 aa4.46□□□□□ -1.7
SCN1A-212ENST00000636194 J3QL48 77 aa4.46□□□□□ -1.7
SCN1A-212ENST00000636194 Q8N2B8 174 aa4.46□□□□□ -1.7
SCN1A-212ENST00000636194 MBD6Q96DN6 1003 aa4.46□□□□□ -1.7
SCN1A-212ENST00000636194 TNFRSF13BO14836 293 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-212ENST00000636194 MRGPRG-AS1Q2M3A8 158 aa4.46□□□□□ -1.7
SCN1A-212ENST00000636194 IGLV4-3A0A075B6K6 122 aa4.46□□□□□ -1.7
SCN1A-212ENST00000636194 CRIP2P52943 208 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-212ENST00000636194 NTM-AS1Q6ZSK4 140 aa4.46□□□□□ -1.7
SCN1A-212ENST00000636194 NEXN-AS1Q8NBZ9 246 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms