RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 FAT3Q8TDW7 4589 aa10.02□□□□□ -0.81
LINC00339-209ENST00000635450 ZNF561-AS1K7EIQ3 104 aa10.01□□□□□ -0.81
LINC00339-209ENST00000635450 SLPIP03973 132 aa10.01□□□□□ -0.81
LINC00339-209ENST00000635450 TMEM141Q96I45 108 aa10.01□□□□□ -0.81
LINC00339-209ENST00000635450 IGLV4-3A0A075B6K6 122 aa10□□□□□ -0.81
LINC00339-209ENST00000635450 TGIF2-C20orf24A0A0A6YYL0 155 aa10□□□□□ -0.81
LINC00339-209ENST00000635450 PANO1I0J062 215 aa10□□□□□ -0.81
LINC00339-209ENST00000635450 APOMO95445 188 aa10□□□□□ -0.81
LINC00339-209ENST00000635450 PLA2G1BP04054 148 aaKnown RBP10□□□□□ -0.81
LINC00339-209ENST00000635450 Q6ZN92 141 aa10□□□□□ -0.81
LINC00339-209ENST00000635450 C5orf38Q86SI9 138 aa10□□□□□ -0.81
LINC00339-209ENST00000635450 FAM104AQ969W3 186 aa10□□□□□ -0.81
LINC00339-209ENST00000635450 ALKBH7Q9BT30 221 aaPredicted RBP10□□□□□ -0.81
LINC00339-209ENST00000635450 TEX43Q6ZNM6 134 aa9.99□□□□□ -0.81
LINC00339-209ENST00000635450 C2orf88Q9BSF0 95 aa9.99□□□□□ -0.81
LINC00339-209ENST00000635450 SDIM1Q6ZPB5 146 aa9.98□□□□□ -0.81
LINC00339-209ENST00000635450 TRAPPC1Q9Y5R8 145 aa9.98□□□□□ -0.81
LINC00339-209ENST00000635450 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.98□□□□□ -0.81
LINC00339-209ENST00000635450 NPSP0C0P6 89 aa9.97□□□□□ -0.81
LINC00339-209ENST00000635450 LINC00526Q96FQ7 95 aa9.97□□□□□ -0.81
LINC00339-209ENST00000635450 DPH3Q96FX2 82 aa9.97□□□□□ -0.81
LINC00339-209ENST00000635450 SMCO4Q9NRQ5 59 aa9.97□□□□□ -0.81
LINC00339-209ENST00000635450 PAPPA-AS1Q5QFB9 102 aa9.96□□□□□ -0.82
LINC00339-209ENST00000635450 FA2HQ7L5A8 372 aa9.96□□□□□ -0.82
LINC00339-209ENST00000635450 CARD19Q96LW7 228 aa9.96□□□□□ -0.82
LINC00339-209ENST00000635450 VCX2Q9H322 139 aa9.96□□□□□ -0.82
LINC00339-209ENST00000635450 PKIGQ9Y2B9 76 aa9.96□□□□□ -0.82
LINC00339-209ENST00000635450 IGHV3OR16-9A0A0B4J2B5 98 aa9.95□□□□□ -0.82
LINC00339-209ENST00000635450 LINC01549A6NIU2 74 aa9.95□□□□□ -0.82
LINC00339-209ENST00000635450 J3QL48 77 aa9.95□□□□□ -0.82
LINC00339-209ENST00000635450 HNRNPA3P51991 378 aaKnown RBP9.95□□□□□ -0.82
LINC00339-209ENST00000635450 COX6A2Q02221 97 aa9.95□□□□□ -0.82
LINC00339-209ENST00000635450 SYCNQ0VAF6 134 aa9.95□□□□□ -0.82
LINC00339-209ENST00000635450 TOMM6Q96B49 74 aa9.95□□□□□ -0.82
LINC00339-209ENST00000635450 IGLV4-69A0A075B6H9 119 aa9.94□□□□□ -0.82
LINC00339-209ENST00000635450 IGIPA6NJ69 53 aa9.94□□□□□ -0.82
LINC00339-209ENST00000635450 SLC7A5P1Q8MH63 180 aa9.94□□□□□ -0.82
LINC00339-209ENST00000635450 OR10D4PQ8NGN7 298 aa9.94□□□□□ -0.82
LINC00339-209ENST00000635450 TIMM17AQ99595 171 aa9.94□□□□□ -0.82
LINC00339-209ENST00000635450 KRTAP29-1A8MX34 341 aaPredicted RBP9.93□□□□□ -0.82
LINC00339-209ENST00000635450 UBE2D1P51668 147 aa9.93□□□□□ -0.82
LINC00339-209ENST00000635450 SPAG11BQ08648 103 aa9.93□□□□□ -0.82
LINC00339-209ENST00000635450 LINC00242Q5T6M2 205 aa9.93□□□□□ -0.82
LINC00339-209ENST00000635450 ORAOV1Q8WV07 137 aa9.93□□□□□ -0.82
LINC00339-209ENST00000635450 SCGB3A1Q96QR1 104 aa9.93□□□□□ -0.82
LINC00339-209ENST00000635450 CAMK2N2Q96S95 79 aa9.93□□□□□ -0.82
LINC00339-209ENST00000635450 AMELXQ99217 191 aa9.93□□□□□ -0.82
LINC00339-209ENST00000635450 LINC01546A6NGU7 62 aa9.92□□□□□ -0.82
LINC00339-209ENST00000635450 ZC2HC1BQ5TFG8 222 aa9.92□□□□□ -0.82
LINC00339-209ENST00000635450 LINC00173Q6ZV60 143 aa9.92□□□□□ -0.82
LINC00339-209ENST00000635450 ERASQ7Z444 233 aa9.92□□□□□ -0.82
LINC00339-209ENST00000635450 C2orf48Q96LS8 159 aa9.92□□□□□ -0.82
LINC00339-209ENST00000635450 CHTF8P0CG12 524 aa9.91□□□□□ -0.82
LINC00339-209ENST00000635450 CIRBPQ14011 172 aaKnown RBP9.91□□□□□ -0.82
LINC00339-209ENST00000635450 A0A087WZ39 114 aa9.9□□□□□ -0.82
LINC00339-209ENST00000635450 IGKV2-24A0A0C4DH68 120 aa9.9□□□□□ -0.82
LINC00339-209ENST00000635450 SEC11AP67812 179 aa9.9□□□□□ -0.82
LINC00339-209ENST00000635450 Q6ZRU5 148 aa9.9□□□□□ -0.82
LINC00339-209ENST00000635450 C18orf32Q8TCD1 76 aa9.9□□□□□ -0.82
LINC00339-209ENST00000635450 SPACA4Q8TDM5 124 aa9.9□□□□□ -0.82
LINC00339-209ENST00000635450 F8WDY8 70 aa9.89□□□□□ -0.83
LINC00339-209ENST00000635450 RAB5BP61020 215 aa9.89□□□□□ -0.83
LINC00339-209ENST00000635450 RPL37AP61513 92 aaKnown RBP9.89□□□□□ -0.83
LINC00339-209ENST00000635450 MAJINQ3KP22 176 aa9.89□□□□□ -0.83
LINC00339-209ENST00000635450 A0A087WYN8 130 aa9.88□□□□□ -0.83
LINC00339-209ENST00000635450 LINC00614P0C842 121 aa9.88□□□□□ -0.83
LINC00339-209ENST00000635450 LINC01561Q8N1V8 128 aa9.88□□□□□ -0.83
LINC00339-209ENST00000635450 YPEL4Q96NS1 127 aa9.88□□□□□ -0.83
LINC00339-209ENST00000635450 GEMIN7Q9H840 131 aaKnown RBP9.88□□□□□ -0.83
LINC00339-209ENST00000635450 LINC00474Q9P2X8 69 aa9.88□□□□□ -0.83
LINC00339-209ENST00000635450 A0A096LNI7 61 aa9.87□□□□□ -0.83
LINC00339-209ENST00000635450 LOC107984640A0A0U1RRK4 108 aa9.87□□□□□ -0.83
LINC00339-209ENST00000635450 NDUFA1O15239 70 aa9.87□□□□□ -0.83
LINC00339-209ENST00000635450 HERVK_113P63121 156 aa9.87□□□□□ -0.83
LINC00339-209ENST00000635450 FAM19A3Q7Z5A8 133 aa9.87□□□□□ -0.83
LINC00339-209ENST00000635450 CBLN2Q8IUK8 224 aa9.87□□□□□ -0.83
LINC00339-209ENST00000635450 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.86□□□□□ -0.83
LINC00339-209ENST00000635450 RNF151Q2KHN1 245 aa9.85□□□□□ -0.83
LINC00339-209ENST00000635450 STPG4Q8N801 248 aa9.85□□□□□ -0.83
LINC00339-209ENST00000635450 PACRGQ96M98 296 aaPredicted RBP9.85□□□□□ -0.83
LINC00339-209ENST00000635450 MRPL35Q9NZE8 188 aaKnown RBP9.85□□□□□ -0.83
LINC00339-209ENST00000635450 PLAC8Q9NZF1 115 aa9.85□□□□□ -0.83
LINC00339-209ENST00000635450 HBDP02042 147 aa9.84□□□□□ -0.83
LINC00339-209ENST00000635450 PRSS2P07478 247 aa9.84□□□□□ -0.83
LINC00339-209ENST00000635450 GAGE2BQ13066 116 aa9.84□□□□□ -0.83
LINC00339-209ENST00000635450 PMVKQ15126 192 aa9.84□□□□□ -0.83
LINC00339-209ENST00000635450 HMCN2Q8NDA2 5059 aa9.83□□□□□ -0.84
LINC00339-209ENST00000635450 A0A0J9YXV3 536 aa9.83□□□□□ -0.84
LINC00339-209ENST00000635450 PTTG1IPP53801 180 aa9.83□□□□□ -0.84
LINC00339-209ENST00000635450 RPL18AQ02543 176 aaKnown RBP9.83□□□□□ -0.84
LINC00339-209ENST00000635450 URB1-AS1Q96HZ7 61 aa9.83□□□□□ -0.84
LINC00339-209ENST00000635450 CST9LQ9H4G1 147 aa9.83□□□□□ -0.84
LINC00339-209ENST00000635450 TINCRA0A1B0GVN0 87 aa9.82□□□□□ -0.84
LINC00339-209ENST00000635450 KIAA0087Q14695 138 aa9.82□□□□□ -0.84
LINC00339-209ENST00000635450 LINC00469Q8N7U9 141 aa9.82□□□□□ -0.84
LINC00339-209ENST00000635450 C7orf33Q8WU49 177 aa9.82□□□□□ -0.84
LINC00339-209ENST00000635450 TOMM7Q9P0U1 55 aa9.82□□□□□ -0.84
LINC00339-209ENST00000635450 CDKN2A-AS1Q9UH64 79 aa9.82□□□□□ -0.84
LINC00339-209ENST00000635450 NDUFA6P56556 154 aa9.81□□□□□ -0.84
LINC00339-209ENST00000635450 PMCHL1Q16048 86 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms