RNA–Protein interactions for RNA: ENST00000630482.2

SOX2-OT-256, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 1,012 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-256	ENST00000630482	LAMTOR2	Q9Y2Q5	125 aa		7.58	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	RAB5A	P20339	215 aa		7.57	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	XCL1	P47992	114 aa		7.57	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	SUMO2	P61956	95 aa	Known RBP	7.57	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	CFAP161	Q6P656	301 aa		7.57	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	MAP1LC3A	Q9H492	121 aa		7.57	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	LOC389332	A0A1B0GUA5	103 aa		7.56	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	SMAGP	Q0VAQ4	97 aa		7.56	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	KIAA1644	Q3SXP7	199 aa		7.56	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	CBLN2	Q8IUK8	224 aa		7.56	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	OR5A1	Q8NGJ0	315 aa		7.56	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	CCL25	O15444	150 aa		7.55	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	TSHB	P01222	138 aa		7.55	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	TMEM18	Q96B42	140 aa		7.55	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	LINC00959	A0A1B0GUT2	108 aa		7.54	□□□□□ -1.2
SOX2-OT-256	ENST00000630482		H7C423	109 aa		7.54	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	ATP6V1G1	O75348	118 aa		7.54	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	ESD	P10768	282 aa		7.54	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	G0S2	P27469	103 aa		7.54	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	POLR2K	P53803	58 aa	Known RBP	7.54	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	NRAC	Q8N912	160 aa		7.54	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	LINC01600	Q96MT4	127 aa		7.54	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	TRBV27	A0A0K0K1C4	114 aa		7.53	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	NPY	P01303	97 aa		7.53	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	ZNF25	P17030	456 aa	Predicted RBP	7.53	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	CARD19	Q96LW7	228 aa		7.53	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	NXT2	Q9NPJ8	142 aa	Known RBP	7.53	□□□□□ -1.2
SOX2-OT-256	ENST00000630482	IGHV1-58	A0A0C4DH39	117 aa		7.52	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	RPL32	P62910	135 aa	Known RBP	7.52	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	TMEM101	Q96IK0	257 aa		7.52	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	SMIM2	Q9BVW6	85 aa		7.52	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	SCO1	O75880	301 aa		7.51	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	RAB5B	P61020	215 aa		7.51	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	RNASE13	Q5GAN3	156 aa	Known RBP	7.51	□□□□□ -1.21
SOX2-OT-256	ENST00000630482		Q8N8P6	123 aa		7.51	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	ALKBH7	Q9BT30	221 aa	Predicted RBP	7.51	□□□□□ -1.21
SOX2-OT-256	ENST00000630482		A0A0J9YXV3	536 aa		7.5	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	PRSS47	A8MTI9	375 aa		7.5	□□□□□ -1.21
SOX2-OT-256	ENST00000630482		K7EMI3	77 aa		7.5	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	ORMDL2	Q53FV1	153 aa		7.5	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	FA2H	Q7L5A8	372 aa		7.5	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	YPEL4	Q96NS1	127 aa		7.5	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	CDC42SE2	Q9NRR3	84 aa		7.5	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	COLCA2	A8K830	154 aa		7.49	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	SYCN	Q0VAF6	134 aa		7.49	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	SS18	Q15532	418 aa		7.49	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	IGLV4-69	A0A075B6H9	119 aa		7.48	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	TRGC2	P03986	189 aa		7.48	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	IFI27	P40305	119 aa	Predicted RBP	7.48	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	PTTG1IP	P53801	180 aa		7.48	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	KRTAP10-8	P60410	259 aa		7.48	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	GAGE2B	Q13066	116 aa		7.48	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	CD164L2	Q6UWJ8	174 aa		7.48	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	SPINK6	Q6UWN8	80 aa		7.48	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	MRPL52	Q86TS9	123 aa	Known RBP	7.48	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	ZNF664	Q8N3J9	261 aa		7.48	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	LPA	P08519	4548 aa		7.48	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	RNF213	Q63HN8	5207 aa		7.48	□□□□□ -1.21
SOX2-OT-256	ENST00000630482		A0A1W2PNN7	141 aa		7.47	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	SRSF9	Q13242	221 aa	Known RBP eCLIP	7.47	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	BAGE3	Q86Y29	109 aa		7.47	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	LINC00474	Q9P2X8	69 aa		7.47	□□□□□ -1.21
SOX2-OT-256	ENST00000630482	LINC01549	A6NIU2	74 aa		7.46	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	LINC00614	P0C842	121 aa		7.46	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	REG3G	Q6UW15	175 aa		7.46	□□□□□ -1.22
SOX2-OT-256	ENST00000630482		Q6ZRP5	223 aa		7.46	□□□□□ -1.22
SOX2-OT-256	ENST00000630482		Q6ZUT4	128 aa		7.46	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	CYSLTR1	Q9Y271	337 aa		7.46	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	UBE2D4	Q9Y2X8	147 aa		7.46	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	LOC107984640	A0A0U1RRK4	108 aa		7.45	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	PKIG	Q9Y2B9	76 aa		7.45	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	TRAV13-1	A0A0B4J241	112 aa		7.44	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	7.44	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	COX7A2L	O14548	114 aa		7.44	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	MAL	P21145	153 aa		7.44	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	RPL18A	Q02543	176 aa	Known RBP	7.44	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	C5orf38	Q86SI9	138 aa		7.44	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	C18orf32	Q8TCD1	76 aa		7.44	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	CAMK2N2	Q96S95	79 aa		7.44	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	C1orf196	B1AJZ1	125 aa		7.43	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	PAPPA-AS1	Q5QFB9	102 aa		7.43	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	C2orf66	Q6UXQ4	117 aa		7.43	□□□□□ -1.22
SOX2-OT-256	ENST00000630482		Q6ZN92	141 aa		7.43	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	PHF5A	Q7RTV0	110 aa	Known RBP	7.43	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	OPRPN	Q99935	248 aa	Predicted RBP	7.43	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	SPANXA1	Q9NS26	97 aa		7.43	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	PSORS1C2	Q9UIG4	136 aa		7.43	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	APOM	O95445	188 aa		7.42	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	C9orf116	Q5BN46	136 aa	Predicted RBP	7.42	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	CHCHD1	Q96BP2	118 aa	Known RBP	7.42	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	SCGB3A1	Q96QR1	104 aa		7.42	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	TIMM21	Q9BVV7	248 aa		7.42	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	CSDC2	Q9Y534	153 aa	Known RBP	7.42	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	HSBP1	O75506	76 aa		7.41	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	RPL39	P62891	51 aa	Known RBP	7.41	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	SPAG11B	Q08648	103 aa		7.41	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	FAM104A	Q969W3	186 aa		7.41	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	VCX2	Q9H322	139 aa		7.41	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	TOMM6	Q96B49	74 aa		7.4	□□□□□ -1.22
SOX2-OT-256	ENST00000630482	TMEM141	Q96I45	108 aa		7.4	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms