RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 IGHV1-2P23083 117 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 SPAG11BQ08648 103 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 PRR4Q16378 134 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 SPAG11AQ6PDA7 123 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 C2orf66Q6UXQ4 117 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 MED13LQ71F56 2210 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 PKD1L2Q7Z442 2459 aa2.79□□□□□ -1.96
R3HDM1-220ENST00000628915 A0A0J9YX75 114 aa2.78□□□□□ -1.96
R3HDM1-220ENST00000628915 A0A0J9YXY3 114 aa2.78□□□□□ -1.96
R3HDM1-220ENST00000628915 A6NN06 94 aa2.78□□□□□ -1.96
R3HDM1-220ENST00000628915 WT1-ASQ06250 92 aa2.78□□□□□ -1.96
R3HDM1-220ENST00000628915 LUZP6Q538Z0 58 aa2.78□□□□□ -1.96
R3HDM1-220ENST00000628915 XP32Q5T750 250 aa2.78□□□□□ -1.96
R3HDM1-220ENST00000628915 MAP1BP46821 2468 aaKnown RBP2.78□□□□□ -1.96
R3HDM1-220ENST00000628915 TRGV3P03979 118 aa2.78□□□□□ -1.96
R3HDM1-220ENST00000628915 CHTF8P0CG12 524 aa2.78□□□□□ -1.96
R3HDM1-220ENST00000628915 HIGD2BQ4VC39 106 aa2.78□□□□□ -1.96
R3HDM1-220ENST00000628915 FAT2Q9NYQ8 4349 aa2.78□□□□□ -1.96
R3HDM1-220ENST00000628915 IGHV3-64A0A075B6Q5 118 aa2.78□□□□□ -1.96
R3HDM1-220ENST00000628915 JMJD7-PLA2G4BH0Y9G9 81 aa2.78□□□□□ -1.96
R3HDM1-220ENST00000628915 H3BRN7 92 aa2.78□□□□□ -1.96
R3HDM1-220ENST00000628915 GNLYP22749 145 aa2.78□□□□□ -1.96
R3HDM1-220ENST00000628915 DNAH6Q9C0G6 4158 aa2.78□□□□□ -1.97
R3HDM1-220ENST00000628915 MALRD1Q5VYJ5 2156 aa2.78□□□□□ -1.97
R3HDM1-220ENST00000628915 IGHV3-64DA0A0J9YX35 117 aa2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 LMO4P61968 165 aa2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 ADAMTSL4-AS1Q5T5F5 129 aa2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 C17orf82Q86X59 251 aaPredicted RBP2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 KLF14Q8TD94 323 aaPredicted RBP2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 DSCAMO60469 2012 aa2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 IGHV3OR16-12A0A075B7B8 117 aa2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 DEFB103AP81534 67 aa2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 MRPS21P82921 87 aaKnown RBP2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 Q6ZRP5 223 aa2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 GAFA1Q96PS6 74 aa2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 ABCA2Q9BZC7 2435 aa2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 LRP4O75096 1905 aa2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 ZNF833PQ6ZTB9 187 aa2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 IGHV4-4A0A075B6R2 117 aa2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 IGKV3D-20A0A0C4DH25 116 aa2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 NDUFB1O75438 58 aa2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 CGB3P0DN86 165 aa2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 CGB7P0DN87 165 aa2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 C17orf58Q2M2W7 97 aa2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 FAM74A4Q5TZK3 123 aa2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 MRPL36Q9P0J6 103 aaKnown RBP2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 ZNF580Q9UK33 172 aa2.77□□□□□ -1.97
R3HDM1-220ENST00000628915 NBASA2RRP1 2371 aa2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 ZNF292O60281 2723 aa2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 RPL37AP8A6NKH3 93 aa2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 SRRM5B3KS81 715 aa2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 GAS8-AS1O95177 125 aa2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 HCP5Q6MZN7 132 aa2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 Q8N814 137 aa2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 LEAP2Q969E1 77 aa2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 ASXL3Q9C0F0 2248 aa2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 HRNRQ86YZ3 2850 aaPredicted RBP2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 CEP250Q9BV73 2442 aa2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 C9orf66Q5T8R8 295 aa2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 B9D2Q9BPU9 175 aa2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 LINC00574Q9H8X3 128 aa2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 GVINP1Q7Z2Y8 2422 aa2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 IGKV2-40A0A087WW87 121 aaPredicted RBP2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 BPY2O14599 106 aa2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 IGKV2D-40P01614 121 aaPredicted RBP2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 DEFB133Q30KQ1 61 aa2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 C11orf71Q6IPW1 123 aa2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 C1orf64Q8NEQ6 169 aa2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 XAGE1AQ9HD64 81 aa2.76□□□□□ -1.97
R3HDM1-220ENST00000628915 IGLV4-69A0A075B6H9 119 aa2.75□□□□□ -1.97
R3HDM1-220ENST00000628915 IGHV3-73A0A0B4J1V6 119 aa2.75□□□□□ -1.97
R3HDM1-220ENST00000628915 MIAQ16674 131 aa2.75□□□□□ -1.97
R3HDM1-220ENST00000628915 LINC00476Q8WZB0 136 aa2.75□□□□□ -1.97
R3HDM1-220ENST00000628915 PKD1P98161 4303 aa2.75□□□□□ -1.97
R3HDM1-220ENST00000628915 A0A1B0GW54 56 aa2.75□□□□□ -1.97
R3HDM1-220ENST00000628915 ZNF702PQ9H963 129 aa2.75□□□□□ -1.97
R3HDM1-220ENST00000628915 IGHV3-30-3P0DP02 117 aa2.75□□□□□ -1.97
R3HDM1-220ENST00000628915 CCL4P13236 92 aa2.75□□□□□ -1.97
R3HDM1-220ENST00000628915 C10orf55Q5SWW7 151 aa2.75□□□□□ -1.97
R3HDM1-220ENST00000628915 C20orf203Q8NBC4 194 aa2.75□□□□□ -1.97
R3HDM1-220ENST00000628915 AMELXQ99217 191 aa2.75□□□□□ -1.97
R3HDM1-220ENST00000628915 SMAD5-AS1Q9Y6J3 95 aa2.75□□□□□ -1.97
R3HDM1-220ENST00000628915 COL6A6A6NMZ7 2263 aa2.75□□□□□ -1.97
R3HDM1-220ENST00000628915 HYDINQ4G0P3 5121 aa2.75□□□□□ -1.97
R3HDM1-220ENST00000628915 COL7A1Q02388 2944 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 IGHV3-16A0A0C4DH30 117 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 LOC101927531A0A1B0GV80 90 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 ERC2-IT1O76042 136 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 RNASE3P12724 160 aaKnown RBP2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 DEFB112Q30KQ8 113 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 C14orf178Q8N769 122 aaPredicted RBP2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 CAMK2N2Q96S95 79 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 H0YGX0 51 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 IGHV1-46P01743 117 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 IGHV3-21A0A0B4J1V1 117 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 IGKV1-17P01599 117 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 IGHV4-30-4P0DP06 118 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 Q5VV11 94 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 Q8TAT8 98 aa2.74□□□□□ -1.97
R3HDM1-220ENST00000628915 DPM3Q9P2X0 92 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms