RNA–Protein interactions for RNA: ENST00000628867.1

SPTAN1-215, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-215ENST00000628867 MRPL51Q4U2R6 128 aaKnown RBP4.6□□□□□ -1.67
SPTAN1-215ENST00000628867 MRPL54Q6P161 138 aaKnown RBP4.6□□□□□ -1.67
SPTAN1-215ENST00000628867 UQCC3Q6UW78 93 aa4.6□□□□□ -1.67
SPTAN1-215ENST00000628867 COMMD7Q86VX2 200 aa4.6□□□□□ -1.67
SPTAN1-215ENST00000628867 TMEM242Q9NWH2 141 aa4.6□□□□□ -1.67
SPTAN1-215ENST00000628867 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.59□□□□□ -1.67
SPTAN1-215ENST00000628867 TRBV27A0A0K0K1C4 114 aa4.59□□□□□ -1.67
SPTAN1-215ENST00000628867 LINC00959A0A1B0GUT2 108 aa4.59□□□□□ -1.67
SPTAN1-215ENST00000628867 A0A1B0GW15 77 aa4.59□□□□□ -1.67
SPTAN1-215ENST00000628867 IGKV2-29A2NJV5 120 aaPredicted RBP4.59□□□□□ -1.67
SPTAN1-215ENST00000628867 ZNF25P17030 456 aaPredicted RBP4.59□□□□□ -1.67
SPTAN1-215ENST00000628867 FAM104BQ5XKR9 115 aa4.59□□□□□ -1.67
SPTAN1-215ENST00000628867 CD164L2Q6UWJ8 174 aa4.59□□□□□ -1.67
SPTAN1-215ENST00000628867 ATP5L2Q7Z4Y8 100 aa4.59□□□□□ -1.67
SPTAN1-215ENST00000628867 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
SPTAN1-215ENST00000628867 CARHSP1Q9Y2V2 147 aaKnown RBP4.59□□□□□ -1.67
SPTAN1-215ENST00000628867 TMEM218A2RU14 115 aa4.58□□□□□ -1.68
SPTAN1-215ENST00000628867 LINC00862A6NCI5 91 aa4.58□□□□□ -1.68
SPTAN1-215ENST00000628867 PPP1R2P9O14990 202 aa4.58□□□□□ -1.68
SPTAN1-215ENST00000628867 ESDP10768 282 aa4.58□□□□□ -1.68
SPTAN1-215ENST00000628867 PMCHP20382 165 aa4.58□□□□□ -1.68
SPTAN1-215ENST00000628867 POLR2KP53803 58 aaKnown RBP4.58□□□□□ -1.68
SPTAN1-215ENST00000628867 LINC01547P58512 204 aaPredicted RBP4.58□□□□□ -1.68
SPTAN1-215ENST00000628867 OPRPNQ99935 248 aaPredicted RBP4.58□□□□□ -1.68
SPTAN1-215ENST00000628867 ST20Q9HBF5 79 aa4.58□□□□□ -1.68
SPTAN1-215ENST00000628867 D6R8Y8 96 aa4.57□□□□□ -1.68
SPTAN1-215ENST00000628867 I3L3M4 83 aa4.57□□□□□ -1.68
SPTAN1-215ENST00000628867 COX7A2LO14548 114 aa4.57□□□□□ -1.68
SPTAN1-215ENST00000628867 NPYP01303 97 aa4.57□□□□□ -1.68
SPTAN1-215ENST00000628867 SUMO2P61956 95 aaKnown RBP4.57□□□□□ -1.68
SPTAN1-215ENST00000628867 RPL32P62910 135 aaKnown RBP4.57□□□□□ -1.68
SPTAN1-215ENST00000628867 IMMP2LQ96T52 175 aa4.57□□□□□ -1.68
SPTAN1-215ENST00000628867 SEC11CQ9BY50 192 aa4.57□□□□□ -1.68
SPTAN1-215ENST00000628867 FSIP2Q5CZC0 6907 aa4.56□□□□□ -1.68
SPTAN1-215ENST00000628867 TRBV24-1A0A075B6N3 115 aa4.56□□□□□ -1.68
SPTAN1-215ENST00000628867 C7orf77A4D0Y5 90 aa4.56□□□□□ -1.68
SPTAN1-215ENST00000628867 C1orf196B1AJZ1 125 aa4.56□□□□□ -1.68
SPTAN1-215ENST00000628867 F8W036 122 aa4.56□□□□□ -1.68
SPTAN1-215ENST00000628867 MT-ND4LP03901 98 aa4.56□□□□□ -1.68
SPTAN1-215ENST00000628867 S100A8P05109 93 aa4.56□□□□□ -1.68
SPTAN1-215ENST00000628867 C10orf91Q5T1B1 145 aa4.56□□□□□ -1.68
SPTAN1-215ENST00000628867 FAM19A5Q7Z5A7 132 aaPredicted RBP4.56□□□□□ -1.68
SPTAN1-215ENST00000628867 MRPL52Q86TS9 123 aaKnown RBP4.56□□□□□ -1.68
SPTAN1-215ENST00000628867 SMIM2Q9BVW6 85 aa4.56□□□□□ -1.68
SPTAN1-215ENST00000628867 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.55□□□□□ -1.68
SPTAN1-215ENST00000628867 TNFRSF6BO95407 300 aa4.55□□□□□ -1.68
SPTAN1-215ENST00000628867 PPP1R17O96001 155 aa4.55□□□□□ -1.68
SPTAN1-215ENST00000628867 SMAGPQ0VAQ4 97 aa4.55□□□□□ -1.68
SPTAN1-215ENST00000628867 GAGE2EQ4V326 116 aa4.55□□□□□ -1.68
SPTAN1-215ENST00000628867 TYMSOSQ8TAI1 123 aa4.55□□□□□ -1.68
SPTAN1-215ENST00000628867 C2orf48Q96LS8 159 aa4.55□□□□□ -1.68
SPTAN1-215ENST00000628867 C20orf78Q9BR46 151 aa4.55□□□□□ -1.68
SPTAN1-215ENST00000628867 GAGE2DQ9UEU5 116 aa4.55□□□□□ -1.68
SPTAN1-215ENST00000628867 KRTAP1-4P0C5Y4 121 aa4.54□□□□□ -1.68
SPTAN1-215ENST00000628867 CKS2P33552 79 aa4.54□□□□□ -1.68
SPTAN1-215ENST00000628867 LCE2CQ5TA81 110 aa4.54□□□□□ -1.68
SPTAN1-215ENST00000628867 Q6ZUT4 128 aa4.54□□□□□ -1.68
SPTAN1-215ENST00000628867 ORMDL3Q8N138 153 aa4.54□□□□□ -1.68
SPTAN1-215ENST00000628867 UBE2D4Q9Y2X8 147 aa4.54□□□□□ -1.68
SPTAN1-215ENST00000628867 TRAV9-1A0A075B6T8 112 aa4.53□□□□□ -1.68
SPTAN1-215ENST00000628867 VCYO14598 125 aa4.53□□□□□ -1.68
SPTAN1-215ENST00000628867 PPBPP02775 128 aa4.53□□□□□ -1.68
SPTAN1-215ENST00000628867 CRYGAP11844 174 aa4.53□□□□□ -1.68
SPTAN1-215ENST00000628867 FCER1GP30273 86 aa4.53□□□□□ -1.68
SPTAN1-215ENST00000628867 SPAG11BQ08648 103 aa4.53□□□□□ -1.68
SPTAN1-215ENST00000628867 RHEBQ15382 184 aa4.53□□□□□ -1.68
SPTAN1-215ENST00000628867 RNF151Q2KHN1 245 aa4.53□□□□□ -1.68
SPTAN1-215ENST00000628867 TMEM136Q6ZRR5 245 aa4.53□□□□□ -1.68
SPTAN1-215ENST00000628867 C5orf38Q86SI9 138 aa4.53□□□□□ -1.68
SPTAN1-215ENST00000628867 FAM104AQ969W3 186 aa4.53□□□□□ -1.68
SPTAN1-215ENST00000628867 PRELID3AQ96N28 172 aa4.53□□□□□ -1.68
SPTAN1-215ENST00000628867 KIR2DL4Q99706 377 aa4.53□□□□□ -1.68
SPTAN1-215ENST00000628867 CTDSP1Q9GZU7 261 aa4.53□□□□□ -1.68
SPTAN1-215ENST00000628867 CDC42SE2Q9NRR3 84 aa4.53□□□□□ -1.68
SPTAN1-215ENST00000628867 IGLV7-46A0A075B6I9 117 aa4.52□□□□□ -1.69
SPTAN1-215ENST00000628867 TRAV13-1A0A0B4J241 112 aa4.52□□□□□ -1.69
SPTAN1-215ENST00000628867 FAM168BA1KXE4 195 aa4.52□□□□□ -1.69
SPTAN1-215ENST00000628867 M0QXV9 152 aa4.52□□□□□ -1.69
SPTAN1-215ENST00000628867 NDUFA1O15239 70 aa4.52□□□□□ -1.69
SPTAN1-215ENST00000628867 ZNF861PO60384 105 aa4.52□□□□□ -1.69
SPTAN1-215ENST00000628867 RPL39P62891 51 aaKnown RBP4.52□□□□□ -1.69
SPTAN1-215ENST00000628867 RNASE13Q5GAN3 156 aaKnown RBP4.52□□□□□ -1.69
SPTAN1-215ENST00000628867 RETNLBQ9BQ08 111 aa4.52□□□□□ -1.69
SPTAN1-215ENST00000628867 TIMM21Q9BVV7 248 aa4.52□□□□□ -1.69
SPTAN1-215ENST00000628867 LAMTOR2Q9Y2Q5 125 aa4.52□□□□□ -1.69
SPTAN1-215ENST00000628867 CSDC2Q9Y534 153 aaKnown RBP4.52□□□□□ -1.69
SPTAN1-215ENST00000628867 F8WDY8 70 aa4.51□□□□□ -1.69
SPTAN1-215ENST00000628867 TCAPO15273 167 aa4.51□□□□□ -1.69
SPTAN1-215ENST00000628867 LINC00337Q8N6G1 96 aa4.51□□□□□ -1.69
SPTAN1-215ENST00000628867 ORAOV1Q8WV07 137 aa4.51□□□□□ -1.69
SPTAN1-215ENST00000628867 MRPL35Q9NZE8 188 aaKnown RBP4.51□□□□□ -1.69
SPTAN1-215ENST00000628867 SCGB1D1O95968 90 aa4.5□□□□□ -1.69
SPTAN1-215ENST00000628867 RPL28P46779 137 aaKnown RBP4.5□□□□□ -1.69
SPTAN1-215ENST00000628867 LINC00173Q6ZV60 143 aa4.5□□□□□ -1.69
SPTAN1-215ENST00000628867 KRTAP11-1Q8IUC1 163 aa4.5□□□□□ -1.69
SPTAN1-215ENST00000628867 OR10D4PQ8NGN7 298 aa4.5□□□□□ -1.69
SPTAN1-215ENST00000628867 MAP1LC3AQ9H492 121 aa4.5□□□□□ -1.69
SPTAN1-215ENST00000628867 SPANXA1Q9NS26 97 aa4.5□□□□□ -1.69
SPTAN1-215ENST00000628867 MRPS36P82909 103 aaKnown RBP4.49□□□□□ -1.69
SPTAN1-215ENST00000628867 TPRXLQ17RH7 258 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms