RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 COX11Q9Y6N1 276 aa6.56□□□□□ -1.36
SOX2-OT-249ENST00000628810 DNAH17Q9UFH2 4485 aa6.55□□□□□ -1.36
SOX2-OT-249ENST00000628810 IGKV2D-24A0A075B6R9 120 aa6.55□□□□□ -1.36
SOX2-OT-249ENST00000628810 IFITM10A6NMD0 228 aa6.55□□□□□ -1.36
SOX2-OT-249ENST00000628810 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.55□□□□□ -1.36
SOX2-OT-249ENST00000628810 BAALCQ8WXS3 180 aa6.55□□□□□ -1.36
SOX2-OT-249ENST00000628810 FAT2Q9NYQ8 4349 aa6.54□□□□□ -1.36
SOX2-OT-249ENST00000628810 UBE2D1P51668 147 aa6.54□□□□□ -1.36
SOX2-OT-249ENST00000628810 NDUFA6P56556 154 aa6.54□□□□□ -1.36
SOX2-OT-249ENST00000628810 SS18Q15532 418 aa6.54□□□□□ -1.36
SOX2-OT-249ENST00000628810 C2orf88Q9BSF0 95 aa6.54□□□□□ -1.36
SOX2-OT-249ENST00000628810 VCX2Q9H322 139 aa6.54□□□□□ -1.36
SOX2-OT-249ENST00000628810 IGLV10-54A0A075B6I4 117 aa6.53□□□□□ -1.36
SOX2-OT-249ENST00000628810 IGKV3OR2-268A0A0C4DH90 116 aa6.53□□□□□ -1.36
SOX2-OT-249ENST00000628810 LEPROTL1O95214 131 aa6.53□□□□□ -1.36
SOX2-OT-249ENST00000628810 FOXI1Q12951 378 aa6.53□□□□□ -1.36
SOX2-OT-249ENST00000628810 PMVKQ15126 192 aa6.53□□□□□ -1.36
SOX2-OT-249ENST00000628810 CD164L2Q6UWJ8 174 aa6.53□□□□□ -1.36
SOX2-OT-249ENST00000628810 LINC00336Q6ZUF6 198 aa6.53□□□□□ -1.36
SOX2-OT-249ENST00000628810 MAPKAPK5-AS1Q8N8E1 139 aa6.53□□□□□ -1.36
SOX2-OT-249ENST00000628810 CHCHD10Q8WYQ3 142 aaPredicted RBP6.53□□□□□ -1.36
SOX2-OT-249ENST00000628810 IFI27L1Q96BM0 104 aa6.53□□□□□ -1.36
SOX2-OT-249ENST00000628810 CST9LQ9H4G1 147 aa6.53□□□□□ -1.36
SOX2-OT-249ENST00000628810 HSPB8Q9UJY1 196 aa6.53□□□□□ -1.36
SOX2-OT-249ENST00000628810 TRAV13-1A0A0B4J241 112 aa6.52□□□□□ -1.37
SOX2-OT-249ENST00000628810 TRAV12-1A0A0B4J245 112 aa6.52□□□□□ -1.37
SOX2-OT-249ENST00000628810 LINC00242Q5T6M2 205 aa6.52□□□□□ -1.37
SOX2-OT-249ENST00000628810 ZC2HC1BQ5TFG8 222 aa6.52□□□□□ -1.37
SOX2-OT-249ENST00000628810 HECTD4Q9Y4D8 3996 aa6.52□□□□□ -1.37
SOX2-OT-249ENST00000628810 IGHV3OR16-9A0A0B4J2B5 98 aa6.51□□□□□ -1.37
SOX2-OT-249ENST00000628810 LRCOL1A6NCL2 159 aa6.51□□□□□ -1.37
SOX2-OT-249ENST00000628810 PRSS29PA6NIE9 313 aa6.51□□□□□ -1.37
SOX2-OT-249ENST00000628810 PSCAO43653 123 aa6.51□□□□□ -1.37
SOX2-OT-249ENST00000628810 XCL1P47992 114 aa6.51□□□□□ -1.37
SOX2-OT-249ENST00000628810 IGLV5-45A0A087WSX0 123 aa6.5□□□□□ -1.37
SOX2-OT-249ENST00000628810 TINCRA0A1B0GVN0 87 aa6.5□□□□□ -1.37
SOX2-OT-249ENST00000628810 GAGE12HA6NDE8 117 aa6.5□□□□□ -1.37
SOX2-OT-249ENST00000628810 S100A6P06703 90 aa6.5□□□□□ -1.37
SOX2-OT-249ENST00000628810 SEC11AP67812 179 aa6.5□□□□□ -1.37
SOX2-OT-249ENST00000628810 HIST3H2BBQ8N257 126 aa6.5□□□□□ -1.37
SOX2-OT-249ENST00000628810 PKD1P98161 4303 aa6.49□□□□□ -1.37
SOX2-OT-249ENST00000628810 IGLV4-69A0A075B6H9 119 aa6.49□□□□□ -1.37
SOX2-OT-249ENST00000628810 A0A087WTM6 91 aa6.49□□□□□ -1.37
SOX2-OT-249ENST00000628810 C5orf52A6NGY3 159 aa6.49□□□□□ -1.37
SOX2-OT-249ENST00000628810 IGLC3P0DOY3 106 aa6.49□□□□□ -1.37
SOX2-OT-249ENST00000628810 HERVK_113P63121 156 aa6.49□□□□□ -1.37
SOX2-OT-249ENST00000628810 LINC01561Q8N1V8 128 aa6.49□□□□□ -1.37
SOX2-OT-249ENST00000628810 A0A087WZ39 114 aa6.48□□□□□ -1.37
SOX2-OT-249ENST00000628810 A0A0J9YXV3 536 aa6.48□□□□□ -1.37
SOX2-OT-249ENST00000628810 KRTAP9-7A8MTY7 169 aa6.48□□□□□ -1.37
SOX2-OT-249ENST00000628810 F8VRH5 84 aa6.48□□□□□ -1.37
SOX2-OT-249ENST00000628810 COX7A2LO14548 114 aa6.48□□□□□ -1.37
SOX2-OT-249ENST00000628810 PRSS1P07477 247 aa6.48□□□□□ -1.37
SOX2-OT-249ENST00000628810 FABP4P15090 132 aa6.48□□□□□ -1.37
SOX2-OT-249ENST00000628810 COX6A2Q02221 97 aa6.48□□□□□ -1.37
SOX2-OT-249ENST00000628810 WFDC2Q14508 124 aa6.48□□□□□ -1.37
SOX2-OT-249ENST00000628810 ODF1Q14990 250 aa6.48□□□□□ -1.37
SOX2-OT-249ENST00000628810 SPATA12Q7Z6I5 190 aa6.48□□□□□ -1.37
SOX2-OT-249ENST00000628810 C15orf56Q8N910 161 aa6.48□□□□□ -1.37
SOX2-OT-249ENST00000628810 HIST1H2BLQ99880 126 aa6.48□□□□□ -1.37
SOX2-OT-249ENST00000628810 MAP1LC3CQ9BXW4 147 aa6.48□□□□□ -1.37
SOX2-OT-249ENST00000628810 DNAH11Q96DT5 4516 aa6.47□□□□□ -1.37
SOX2-OT-249ENST00000628810 GVQW2A0A096LPI5 108 aaPredicted RBP6.47□□□□□ -1.37
SOX2-OT-249ENST00000628810 USP17L23D6RBM5 183 aa6.47□□□□□ -1.37
SOX2-OT-249ENST00000628810 SNRPEP62304 92 aaKnown RBP6.47□□□□□ -1.37
SOX2-OT-249ENST00000628810 CHAC1Q9BUX1 264 aa6.47□□□□□ -1.37
SOX2-OT-249ENST00000628810 CHTOPQ9Y3Y2 248 aaKnown RBP6.47□□□□□ -1.37
SOX2-OT-249ENST00000628810 IGHV1-58A0A0C4DH39 117 aa6.46□□□□□ -1.38
SOX2-OT-249ENST00000628810 A0A1B0GVY2 172 aa6.46□□□□□ -1.38
SOX2-OT-249ENST00000628810 SYS1-DBNDD2H3BUS1 97 aa6.46□□□□□ -1.38
SOX2-OT-249ENST00000628810 S100A2P29034 98 aa6.46□□□□□ -1.38
SOX2-OT-249ENST00000628810 C14orf177Q52M58 125 aa6.46□□□□□ -1.38
SOX2-OT-249ENST00000628810 CFAP161Q6P656 301 aa6.46□□□□□ -1.38
SOX2-OT-249ENST00000628810 Q8N814 137 aa6.46□□□□□ -1.38
SOX2-OT-249ENST00000628810 GEMIN7Q9H840 131 aaKnown RBP6.46□□□□□ -1.38
SOX2-OT-249ENST00000628810 MRPL35Q9NZE8 188 aaKnown RBP6.46□□□□□ -1.38
SOX2-OT-249ENST00000628810 CDKN2A-AS1Q9UH64 79 aa6.46□□□□□ -1.38
SOX2-OT-249ENST00000628810 IGHV3-64A0A075B6Q5 118 aa6.45□□□□□ -1.38
SOX2-OT-249ENST00000628810 C11orf86A6NJI1 115 aa6.45□□□□□ -1.38
SOX2-OT-249ENST00000628810 LECT2O14960 151 aa6.45□□□□□ -1.38
SOX2-OT-249ENST00000628810 APOMO95445 188 aa6.45□□□□□ -1.38
SOX2-OT-249ENST00000628810 C3orf79P0CE67 100 aa6.45□□□□□ -1.38
SOX2-OT-249ENST00000628810 LINC01545Q5VT33 79 aa6.45□□□□□ -1.38
SOX2-OT-249ENST00000628810 PET117Q6UWS5 81 aa6.45□□□□□ -1.38
SOX2-OT-249ENST00000628810 C5orf38Q86SI9 138 aa6.45□□□□□ -1.38
SOX2-OT-249ENST00000628810 LINC00469Q8N7U9 141 aa6.45□□□□□ -1.38
SOX2-OT-249ENST00000628810 OR10D4PQ8NGN7 298 aa6.45□□□□□ -1.38
SOX2-OT-249ENST00000628810 H0Y8G0 127 aa6.44□□□□□ -1.38
SOX2-OT-249ENST00000628810 ZNF22P17026 224 aaPredicted RBP6.44□□□□□ -1.38
SOX2-OT-249ENST00000628810 MALP21145 153 aa6.44□□□□□ -1.38
SOX2-OT-249ENST00000628810 PLNP26678 52 aa6.44□□□□□ -1.38
SOX2-OT-249ENST00000628810 NTN5Q8WTR8 489 aaPredicted RBP6.44□□□□□ -1.38
SOX2-OT-249ENST00000628810 SMIM1B2RUZ4 78 aa6.43□□□□□ -1.38
SOX2-OT-249ENST00000628810 H3BRM9 83 aa6.43□□□□□ -1.38
SOX2-OT-249ENST00000628810 CNBPP62633 177 aaKnown RBP6.43□□□□□ -1.38
SOX2-OT-249ENST00000628810 TMA7Q9Y2S6 64 aaKnown RBP6.43□□□□□ -1.38
SOX2-OT-249ENST00000628810 IGLV5-39A0A0G2JS06 123 aa6.42□□□□□ -1.38
SOX2-OT-249ENST00000628810 hDV102S1A0JD36 115 aa6.42□□□□□ -1.38
SOX2-OT-249ENST00000628810 DPM2O94777 84 aa6.42□□□□□ -1.38
SOX2-OT-249ENST00000628810 KRTDAPP60985 99 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms